RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 IGDCC4Q8TDY8 1250 aa28.71■■■□□ 2.19
RUNDC3A-201ENST00000225441 AIDAQ96BJ3 306 aa28.71■■■□□ 2.19
RUNDC3A-201ENST00000225441 SGIP1Q9BQI5 828 aa28.71■■■□□ 2.19
RUNDC3A-201ENST00000225441 KIF28PB7ZC32 967 aa28.7■■■□□ 2.18
RUNDC3A-201ENST00000225441 SKILP12757 684 aa28.7■■■□□ 2.18
RUNDC3A-201ENST00000225441 RCAN1P53805 252 aa28.7■■■□□ 2.18
RUNDC3A-201ENST00000225441 MAP3K12Q12852 859 aa28.7■■■□□ 2.18
RUNDC3A-201ENST00000225441 TRIM29Q14134 588 aa28.7■■■□□ 2.18
RUNDC3A-201ENST00000225441 CYB5R4Q7L1T6 521 aa28.7■■■□□ 2.18
RUNDC3A-201ENST00000225441 KRT23Q9C075 422 aa28.7■■■□□ 2.18
RUNDC3A-201ENST00000225441 HPSEQ9Y251 543 aa28.7■■■□□ 2.18
RUNDC3A-201ENST00000225441 TIAM2Q8IVF5 1701 aa28.7■■■□□ 2.18
RUNDC3A-201ENST00000225441 CCDC69A6NI79 296 aa28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 APPP05067 770 aa28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 PFKFB1P16118 471 aa28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 DPEP1P16444 411 aa28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 KRT40Q6A162 431 aa28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 TUBE1Q9UJT0 475 aa28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 MYO5AQ9Y4I1 1855 aaKnown RBP28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 MYH13Q9UKX3 1938 aa28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 C7orf43Q8WVR3 580 aa28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 C16orf45Q96MC5 204 aaPredicted RBP28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 NOL10Q9BSC4 688 aaKnown RBP28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 WWC3Q9ULE0 1092 aa28.69■■■□□ 2.18
RUNDC3A-201ENST00000225441 NRDCO43847 1150 aa28.68■■■□□ 2.18
RUNDC3A-201ENST00000225441 KCNA3P22001 575 aa28.68■■■□□ 2.18
RUNDC3A-201ENST00000225441 IARSP41252 1262 aaKnown RBP28.68■■■□□ 2.18
RUNDC3A-201ENST00000225441 CCZ1BP86790 482 aa28.68■■■□□ 2.18
RUNDC3A-201ENST00000225441 CCZ1P86791 482 aaPredicted RBP28.68■■■□□ 2.18
RUNDC3A-201ENST00000225441 NYAP1Q6ZVC0 841 aa28.68■■■□□ 2.18
RUNDC3A-201ENST00000225441 CCDC112Q8NEF3 446 aa28.68■■■□□ 2.18
RUNDC3A-201ENST00000225441 CUTAO60888 179 aa28.67■■■□□ 2.18
RUNDC3A-201ENST00000225441 NTRK3Q16288 839 aa28.67■■■□□ 2.18
RUNDC3A-201ENST00000225441 CEP135Q66GS9 1140 aa28.67■■■□□ 2.18
RUNDC3A-201ENST00000225441 TTLL6Q8N841 843 aa28.67■■■□□ 2.18
RUNDC3A-201ENST00000225441 LY9Q9HBG7 655 aa28.67■■■□□ 2.18
RUNDC3A-201ENST00000225441 SYKP43405 635 aa28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 TGFB2P61812 414 aa28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 PTPAQ15257 358 aa28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 CD209Q9NNX6 404 aa28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 LRP2BPQ9P2M1 347 aa28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 KIAA1551Q9HCM1 1747 aa28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 PPFIA3O75145 1194 aa28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 DPCR1Q3MIW9 517 aa28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 CC2D2BQ6DHV5 1058 aa28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 SMAP1Q8IYB5 467 aaPredicted RBP28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 TMTC2Q8N394 836 aa28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 ZNF219Q9P2Y4 722 aaPredicted RBP28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 ABCF2Q9UG63 623 aa28.66■■■□□ 2.18
RUNDC3A-201ENST00000225441 GOLGA8AA7E2F4 631 aa28.65■■■□□ 2.18
RUNDC3A-201ENST00000225441 PTPN14Q15678 1187 aa28.65■■■□□ 2.18
RUNDC3A-201ENST00000225441 TMEM67Q5HYA8 995 aa28.65■■■□□ 2.18
RUNDC3A-201ENST00000225441 IFNL3Q8IZI9 196 aa28.65■■■□□ 2.18
RUNDC3A-201ENST00000225441 PDCL2Q8N4E4 241 aa28.65■■■□□ 2.18
RUNDC3A-201ENST00000225441 B4E1Z4 1266 aa28.64■■■□□ 2.18
RUNDC3A-201ENST00000225441 IL1R1P14778 569 aa28.64■■■□□ 2.18
RUNDC3A-201ENST00000225441 PTGER2P43116 358 aa28.64■■■□□ 2.18
RUNDC3A-201ENST00000225441 GNL2Q13823 731 aaKnown RBP28.64■■■□□ 2.18
RUNDC3A-201ENST00000225441 RESP18Q5W5W9 173 aa28.64■■■□□ 2.18
RUNDC3A-201ENST00000225441 NFXL1Q6ZNB6 911 aa28.64■■■□□ 2.18
RUNDC3A-201ENST00000225441 MAP3K14Q99558 947 aa28.64■■■□□ 2.18
RUNDC3A-201ENST00000225441 NACAP1Q9BZK3 213 aa28.64■■■□□ 2.18
RUNDC3A-201ENST00000225441 NAPBQ9H115 298 aa28.64■■■□□ 2.18
RUNDC3A-201ENST00000225441 IFNAR1P17181 557 aa28.64■■■□□ 2.17
RUNDC3A-201ENST00000225441 SSRP1Q08945 709 aaKnown RBP28.64■■■□□ 2.17
RUNDC3A-201ENST00000225441 NBPF11Q86T75 865 aa28.64■■■□□ 2.17
RUNDC3A-201ENST00000225441 MAGEB6Q8N7X4 407 aa28.64■■■□□ 2.17
RUNDC3A-201ENST00000225441 EYA3Q99504 573 aa28.64■■■□□ 2.17
RUNDC3A-201ENST00000225441 ZC3H12CQ9C0D7 883 aaKnown RBP28.64■■■□□ 2.17
RUNDC3A-201ENST00000225441 SNED1Q8TER0 1413 aa28.64■■■□□ 2.17
RUNDC3A-201ENST00000225441 WDHD1O75717 1129 aaPredicted RBP28.63■■■□□ 2.17
RUNDC3A-201ENST00000225441 FMNL1O95466 1100 aaPredicted RBP28.63■■■□□ 2.17
RUNDC3A-201ENST00000225441 AKNAD1Q5T1N1 836 aa28.63■■■□□ 2.17
RUNDC3A-201ENST00000225441 CCAR2Q8N163 923 aaKnown RBP28.63■■■□□ 2.17
RUNDC3A-201ENST00000225441 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.63■■■□□ 2.17
RUNDC3A-201ENST00000225441 SLC12A7Q9Y666 1083 aa28.63■■■□□ 2.17
RUNDC3A-201ENST00000225441 RIMBP2O15034 1052 aa28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 CBFA2T2O43439 604 aa28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 CDC27P30260 824 aa28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 SART3Q15020 963 aaKnown RBP28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 FILIP1Q7Z7B0 1213 aa28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 HOOK1Q9UJC3 728 aaKnown RBP28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 NCAPHQ15003 741 aa28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 PPP2R5BQ15173 497 aa28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 STAG1Q8WVM7 1258 aa28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 RTFDC1Q9BY42 306 aaPredicted RBP28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 FAM217BQ9NTX9 383 aaPredicted RBP28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 RAI14Q9P0K7 980 aa28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 MORC2Q9Y6X9 1032 aaPredicted RBP28.62■■■□□ 2.17
RUNDC3A-201ENST00000225441 CCDC196A0A1B0GTZ2 297 aa28.61■■■□□ 2.17
RUNDC3A-201ENST00000225441 CCP110O43303 1012 aa28.61■■■□□ 2.17
RUNDC3A-201ENST00000225441 C21orf2O43822 256 aa28.61■■■□□ 2.17
RUNDC3A-201ENST00000225441 SAFBQ15424 915 aaKnown RBP eCLIP28.61■■■□□ 2.17
RUNDC3A-201ENST00000225441 WDR66Q8TBY9 1149 aa28.61■■■□□ 2.17
RUNDC3A-201ENST00000225441 COA1Q9GZY4 146 aa28.61■■■□□ 2.17
RUNDC3A-201ENST00000225441 TSC1Q92574 1164 aa28.6■■■□□ 2.17
RUNDC3A-201ENST00000225441 FEZ1Q99689 392 aa28.6■■■□□ 2.17
RUNDC3A-201ENST00000225441 RNF41Q9H4P4 317 aaPredicted RBP28.6■■■□□ 2.17
RUNDC3A-201ENST00000225441 JAG2Q9Y219 1238 aa28.6■■■□□ 2.17
RUNDC3A-201ENST00000225441 CD2APQ9Y5K6 639 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms