RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Clip2Q9Z0H8 1047 aa22.1■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Usp53P15975 1069 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 VegfbP49766 207 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Prdm1Q60636 856 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 WaplQ65Z40 1200 aaKnown RBP22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Senp6Q6P7W0 1132 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Garem2Q6PAJ3 880 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Tekt3Q6X6Z7 490 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Trpv1Q704Y3 839 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Hps6Q8BLY7 805 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Cep55Q8BT07 462 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Terb1Q8C0V1 768 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Tm4sf4Q91XD3 202 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Mtmr4Q91XS1 1190 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 S1pr4Q9Z0L1 386 aa22.09■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Nmt2O70311 529 aa22.08■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Utp18Q5SSI6 552 aaKnown RBP22.08■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Ppp1r1bQ60829 194 aa22.08■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Ireb2Q811J3 963 aaKnown RBP22.08■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Ift74Q8BKE9 600 aa22.08■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Scfd2Q8BTY8 684 aa22.08■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Fsd2Q8BZ52 692 aa22.08■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Pus7lQ8CE46 702 aa22.08■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Fam83aQ8K2P2 436 aa22.08■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Ythdc1E9Q5K9 736 aaKnown RBP22.07■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Has3O08650 554 aa22.07■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Sept2P42208 361 aaKnown RBP22.07■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Secisbp2lQ6A098 1086 aaKnown RBP22.07■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Tceanc2Q8R2M0 207 aa22.07■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Frmpd4A2AFR3 1320 aa22.07■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Brca1P48754 1812 aa22.07■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Prkg1P0C605 671 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Pkp1P97350 728 aaKnown RBP22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Llgl2Q3TJ91 1027 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Ube2oQ6ZPJ3 1288 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 DlatQ8BMF4 642 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Lca5lQ8C0X0 741 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Ccdc7Q9D541 371 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Celf2Q9Z0H4 508 aaKnown RBP22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Dicer1Q8R418 1916 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Col11a1Q61245 1804 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Atp8b3Q6UQ17 1335 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Pagr1bF6V0H0 108 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Slain1Q68FF7 579 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Micall1Q8BGT6 870 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Sulf1Q8K007 870 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Tut1Q8R3F9 869 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Pagr1aQ99L02 253 aa22.06■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Phactr2B1AVP0 632 aa22.05■■□□□ 1.12
Scn1b-203ENSMUST00000211945 1700006A11RikB9EHI3 544 aa22.05■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Mmp10O55123 476 aa22.05■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Prr16A3KMN5 304 aa22.04■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Magea8O89012 320 aa22.04■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Scg2Q03517 617 aa22.04■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Tacc1Q6Y685 774 aa22.04■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Calhm4Q8CE93 315 aa22.04■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Cchcr1Q8K2I2 770 aa22.04■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Nop2Q922K7 793 aaKnown RBP22.04■■□□□ 1.12
Scn1b-203ENSMUST00000211945 SynrgQ5SV85 1306 aa22.04■■□□□ 1.12
Scn1b-203ENSMUST00000211945 PtpraP18052 829 aa22.03■■□□□ 1.12
Scn1b-203ENSMUST00000211945 EvcP57680 1005 aa22.03■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Znf219Q6IQX8 726 aa22.03■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Scfd1Q8BRF7 639 aaKnown RBP22.03■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Mrpl50Q8VDT9 159 aaKnown RBP22.03■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Ttll1Q91V51 423 aa22.03■■□□□ 1.12
Scn1b-203ENSMUST00000211945 CsadQ9DBE0 493 aa22.03■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Cyp27a1Q9DBG1 533 aa22.03■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Trmt112Q9DCG9 125 aa22.03■■□□□ 1.12
Scn1b-203ENSMUST00000211945 F2rP30558 430 aa22.02■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Sh2d1b2Q45HK4 132 aa22.02■■□□□ 1.12
Scn1b-203ENSMUST00000211945 LrmpQ60664 539 aa22.02■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Glra4Q61603 456 aa22.02■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Myl10Q62082 202 aa22.02■■□□□ 1.12
Scn1b-203ENSMUST00000211945 WtapQ9ER69 396 aa22.02■■□□□ 1.12
Scn1b-203ENSMUST00000211945 Tmem47Q9JJG6 181 aa22.02■■□□□ 1.12
Scn1b-203ENSMUST00000211945 ThbdP15306 577 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Fgfr2P21803 821 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Zbtb39Q6PDK0 712 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Tmem59lQ7TNI2 337 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Pxylp1Q8BHA9 480 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Pms1Q8K119 917 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 EhhadhQ9DBM2 718 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Myh7bA2AQP0 1941 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 MycnP03966 462 aaKnown RBP22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Ddx49Q4FZF3 480 aaKnown RBP22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Sv2cQ69ZS6 727 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Usp50Q6P8X6 390 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Sirt2Q8VDQ8 389 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Mettl16Q9CQG2 553 aaKnown RBP22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Rufy3Q9D394 469 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Mad2l2Q9D752 211 aa22.01■■□□□ 1.11
Scn1b-203ENSMUST00000211945 A430078G23RikE9Q7Y4 484 aa22■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Alppl2P24823 529 aa22■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Irx3P81067 507 aa22■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Znf697Q569E7 569 aa22■■□□□ 1.11
Scn1b-203ENSMUST00000211945 9230110C19RikQ8CC70 267 aa22■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Arhgef6Q8K4I3 771 aa22■■□□□ 1.11
Scn1b-203ENSMUST00000211945 BrapQ99MP8 591 aa22■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Serpinb2P12388 415 aa21.99■■□□□ 1.11
Scn1b-203ENSMUST00000211945 Stk11ipQ3TAA7 1072 aa21.99■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms