RNA–Protein interactions for RNA: ENSMUST00000176670.7

Cpsf6-206, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

TSL 5 BASIC

Gene Cpsf6, Length 2,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-206ENSMUST00000176670 Acad12D3Z7X0 555 aa16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 TbcaP48428 108 aaKnown RBP16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Kiaa0319Q5SZV5 1081 aa16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Lrit1Q8K099 624 aa16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Ndufb9Q9CQJ8 179 aa16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Gm43738A0A0G2JEA5 862 aa16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Cdc37Q61081 379 aa16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Luc7l2Q7TNC4 392 aaKnown RBP16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Ttll4Q80UG8 1193 aa16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Adck5Q80V03 582 aa16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Afg3l2Q8JZQ2 802 aaKnown RBP16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Krt23Q99PS0 422 aa16.89■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Peak1Q69Z38 1735 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Znf568E9PYI1 671 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Ppfibp2O35711 882 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Myl3P09542 204 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Surf1P09925 306 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 MsnP26041 577 aaKnown RBP16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Esyt2Q3TZZ7 845 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Arid3aQ62431 601 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Sass6Q80UK7 654 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 RadxQ8C779 850 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Myo3bQ1EG27 1305 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 PparaP23204 468 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 SsbP32067 415 aaKnown RBP16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Frat1P70339 274 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 C87499Q3UX49 493 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Pex1Q5BL07 1284 aa16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Rbm28Q8CGC6 750 aaKnown RBP16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Apobec3Q99J72 440 aaKnown RBP16.88■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Ccdc88aQ5SNZ0 1873 aa16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Dnajc25A2ALW5 357 aa16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Card6E9PWH2 1175 aa16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Plekha7Q3UIL6 1118 aaKnown RBP16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Usp50Q6P8X6 390 aa16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Gga3Q8BMI3 718 aa16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Slc14a2Q8R4T9 930 aa16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 OscarQ8VBT3 265 aa16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Vps16Q920Q4 839 aa16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Wdr64Q9D565 1086 aa16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Slc34a2Q9DBP0 697 aa16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Epb41l3Q9WV92 929 aa16.87■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 4930523C07RikE9Q2T4 99 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Gm5624F6ZZG8 207 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Ptpn12P35831 775 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 1700013D24RikQ0P521 120 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Kmt5bQ3U8K7 883 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Panx2Q6IMP4 677 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Cep135Q6P5D4 1140 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Asnsd1Q8BFS9 627 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Clic6Q8BHB9 596 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Dnm3Q8BZ98 863 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 RtcbQ99LF4 505 aaKnown RBP16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Calm1P0DP26 149 aaKnown RBP16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Calm2P0DP27 149 aaKnown RBP16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Calm3P0DP28 149 aaKnown RBP16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Slurp2P0DP59 97 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Ftl1P29391 183 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Gas1Q01721 343 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Gjb4Q02738 266 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Cep85Q8BMK0 761 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Smc2Q8CG48 1191 aaKnown RBP16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Stn1Q8K2X3 378 aa16.86■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Tlr8P58682 1032 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Kiaa1468Q148V7 1216 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Aak1Q3UHJ0 959 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Zfp251Q6PCX8 632 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Lrrd1Q8C0R9 853 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Vps53Q8CCB4 832 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Uba5Q8VE47 403 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Iqca1Q9CUL5 857 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Chd5A2A8L1 1946 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Pla2g4bP0C871 782 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Traf3ip1Q149C2 625 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 PsdQ5DTT2 1024 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Atxn2lQ7TQH0 1049 aaKnown RBP16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Mtmr6Q8VE11 617 aa16.85■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Ms4a1P19437 291 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 NfixP70257 488 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Mars2Q499X9 586 aaKnown RBP16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Tmtc2Q56A06 836 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 MycbpapQ5SUV2 932 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Tas2r124Q7M718 309 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Lrrc15Q80X72 579 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 RarsQ9D0I9 660 aaKnown RBP16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Arhgap33Q80YF9 1305 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Usp53P15975 1069 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Gtf2f1Q3THK3 508 aaKnown RBP16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Ccdc51Q3URS9 406 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Krt39Q6IFX4 482 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Fchsd1Q6PFY1 688 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Mei4Q8BRM6 389 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Triml1Q8BVP1 470 aa16.84■□□□□ 0.29
Cpsf6-206ENSMUST00000176670 Ythdc1E9Q5K9 736 aaKnown RBP16.83■□□□□ 0.28
Cpsf6-206ENSMUST00000176670 Tdo2P48776 406 aa16.83■□□□□ 0.28
Cpsf6-206ENSMUST00000176670 LtbrP50284 415 aa16.83■□□□□ 0.28
Cpsf6-206ENSMUST00000176670 Pde5aQ8CG03 865 aa16.83■□□□□ 0.28
Cpsf6-206ENSMUST00000176670 Gimap7Q8R379 293 aa16.83■□□□□ 0.28
Cpsf6-206ENSMUST00000176670 Ndufv1Q91YT0 464 aa16.83■□□□□ 0.28
Cpsf6-206ENSMUST00000176670 Myo1hQ9D6A1 958 aa16.83■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms