RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 SelenooQ9DBC0 667 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Atp1a4Q9WV27 1032 aa14.69□□□□□ -0.06
Nup88-203ENSMUST00000108531 Scn11aQ9R053 1765 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Adck2Q6NSR3 617 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Fchsd1Q6PFY1 688 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Kif1bpQ6ZPU9 617 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 RbsnQ80Y56 783 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Cep85Q8BMK0 761 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Hexim1Q8R409 356 aaKnown RBP14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Tmem143Q8VD26 458 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Tab2Q99K90 693 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Myh7bA2AQP0 1941 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Kif3cO35066 796 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Pbx1P41778 430 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Plekha7Q3UIL6 1118 aaKnown RBP14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Rbm12b2Q66JV4 834 aaKnown RBP14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Esco1Q69Z69 843 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Olfr118Q7TRJ6 321 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Rbm28Q8CGC6 750 aaKnown RBP14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Taf6lQ8R2K4 616 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Bap1Q99PU7 728 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Cfap45Q9D9U9 551 aa14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 Eif4enif1Q9EST3 983 aaKnown RBP14.68□□□□□ -0.06
Nup88-203ENSMUST00000108531 LtbrP50284 415 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Ubac1Q8VDI7 409 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 HdlbpQ8VDJ3 1268 aaKnown RBP14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Mfap3Q922T2 349 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Tob2Q9JM55 345 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Itga2bQ9QUM0 1033 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 4932429P05RikA2ADI4 785 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Prl7d1P04769 244 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Kcnj4P52189 445 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Rad23bP54728 416 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Slc7a3P70423 618 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Slf2Q6P9P0 1278 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Otop3Q80UF9 577 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Prpf3Q922U1 683 aaKnown RBP14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Mfap3lQ9D3X9 409 aa14.67□□□□□ -0.06
Nup88-203ENSMUST00000108531 Igsf9bE9PZ19 1328 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Gm43738A0A0G2JEA5 862 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Rad23aP54726 363 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Pcdha7Q91Y13 937 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Ttc14Q9CSP9 761 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Wnt7aP24383 349 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Traf1P39428 409 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 DSCC1Q14AI0 399 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Sun3Q5SS91 320 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Sik1Q60670 779 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Smim5Q8BT42 78 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Caps2Q8BUG5 550 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Thap2Q9D305 217 aa14.66□□□□□ -0.06
Nup88-203ENSMUST00000108531 Col20a1Q923P0 1320 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 TbcaP48428 108 aaKnown RBP14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Arglu1Q3UL36 271 aaKnown RBP14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Znf496Q5SXI5 585 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 TxlnaQ6PAM1 554 aaKnown RBP14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Drc7Q6V3W6 876 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Pip4k2bQ80XI4 416 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Phldb2Q8K1N2 1249 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Mical1Q8VDP3 1048 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Lonp2Q9DBN5 852 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Gm11983V9GXS8 105 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Cyp2j7A0A140T8U1 504 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Cyp26c1B2RXA7 518 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Dctn1O08788 1281 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Mdh1P14152 334 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Siah1aP61092 282 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Gucy2cQ3UWA6 1072 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 HelbQ6NVF4 1074 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Ppfibp1Q8C8U0 969 aaKnown RBP14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Pus7lQ8CE46 702 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Bicdl2Q8CHW5 507 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 Calml3Q9D6P8 149 aa14.65□□□□□ -0.06
Nup88-203ENSMUST00000108531 A0A1Y7VML8 143 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Map7d2A2AG50 781 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 1700029H14RikE9PY36 240 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Ubap1lG3UW59 384 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Gm21969J3QJZ1 289 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Abl1P00520 1123 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Rtel1Q0VGM9 1203 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Emc10Q3TAS6 258 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Znhit6Q3UFB2 460 aaKnown RBP14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Spata5Q3UMC0 893 aaKnown RBP14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Q66JV7 365 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Slfnl1Q8BHW9 410 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Tube1Q9D6T1 475 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Ltbp4Q8K4G1 1666 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Znfx1Q8R151 1909 aaKnown RBP14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Prr16A3KMN5 304 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Izumo3A6PWV3 263 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Gcom1E9PZ54 550 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Calm1P0DP26 149 aaKnown RBP14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Calm2P0DP27 149 aaKnown RBP14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Calm3P0DP28 149 aaKnown RBP14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Stat5bP42232 786 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 MyzapQ3UIJ9 466 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Ndufb9Q9CQJ8 179 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Smc1aQ9CU62 1233 aaKnown RBP14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Cxcl11Q9JHH5 100 aa14.64□□□□□ -0.07
Nup88-203ENSMUST00000108531 Uchl5Q9WUP7 329 aa14.64□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms