RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Lcmt1A0A0U1RNF2 332 aa13.19□□□□□ -0.3
Trim56-201ENSMUST00000054384 Tmtc4Q8BG19 741 aa13.19□□□□□ -0.3
Trim56-201ENSMUST00000054384 Thoc2B1AZI6 1594 aaKnown RBP13.19□□□□□ -0.3
Trim56-201ENSMUST00000054384 Wdr3Q8BHB4 942 aaKnown RBP13.19□□□□□ -0.3
Trim56-201ENSMUST00000054384 Mettl5Q8K1A0 209 aa13.19□□□□□ -0.3
Trim56-201ENSMUST00000054384 Ythdc2B2RR83 1445 aaKnown RBP13.19□□□□□ -0.3
Trim56-201ENSMUST00000054384 Zkscan16A2ALW2 728 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Apol11aE9PZG0 334 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 NxnP97346 435 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Tmtc2Q56A06 836 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 HdxQ14B70 692 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Iqsec3Q3TES0 1195 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Kank4Q6P9J5 1016 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Amotl2Q8K371 772 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Osbpl5Q9ER64 874 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Kdm5bQ80Y84 1544 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Ift81O35594 676 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 ClgnP52194 611 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 P2rx5Q3UYI1 455 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Rcn2Q8BP92 320 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 AW822073A0A0N4SUK1 652 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Slc10a4Q3UEZ8 437 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Myo1gQ5SUA5 1024 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Arhgap10Q6Y5D8 786 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Rbbp5Q8BX09 538 aaKnown RBP13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 YwhaeP62259 255 aaKnown RBP13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Krt14Q61781 484 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Lzts2Q91YU6 671 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Stat2Q9WVL2 923 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Pik3caP42337 1068 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Nlrx1Q3TL44 975 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Wdr93Q402B2 695 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Ccdc125Q5U465 500 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Ppp2r5eQ61151 467 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 Sar1bQ9CQC9 198 aa13.18□□□□□ -0.3
Trim56-201ENSMUST00000054384 CaluO35887 315 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 EmbP21995 330 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Utp18Q5SSI6 552 aaKnown RBP13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 1700122O11RikJ3QPW6 241 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Gucy1b3O54865 620 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Mtx1P47802 317 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Tbc1d9bQ5SVR0 1263 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Col4a3bpQ9EQG9 624 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Gm4297D3YWB7 211 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Gm38392E9Q2A2 434 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Spc25Q3UA16 226 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Vps54Q5SPW0 977 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Ccdc92Q8VDN4 314 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 H2-OaQ9QWV1 250 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Ppfia4B8QI36 1187 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Lmbrd2Q8C561 694 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Nup58Q8R332 587 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Dzip3Q7TPV2 1204 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Tor4aQ8BH02 426 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Znf76Q8BMU0 568 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Naa16Q9DBB4 864 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Shroom2A2ALU4 1481 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Nsd3Q6P2L6 1439 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Uspl1Q3ULM6 1089 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Anp32cQ64G17 123 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Gkap1Q9JMB0 366 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Rrbp1Q99PL5 1605 aaKnown RBP13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Lrrc23O35125 340 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Znf428Q8C1M2 176 aa13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Xpo5Q924C1 1204 aaKnown RBP13.17□□□□□ -0.3
Trim56-201ENSMUST00000054384 Stk10O55098 966 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Ccdc68Q8BVC4 333 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Ccdc70Q9D9B0 223 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Aox4Q3TYQ9 1336 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Cracr2bQ80ZJ8 394 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 TprnA2AI08 749 aaKnown RBP13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Zfp781Q0P5U5 243 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Tmem132eQ6IEE6 982 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Astn2Q80Z10 1352 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Zscan18E9PUD6 809 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Trim21Q62191 470 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Crybg3Q80W49 1005 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Rbm17Q8JZX4 405 aaKnown RBP13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Vps37bQ8R0J7 285 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Q8R1Y2 203 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Flot1O08917 428 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Ttc1Q91Z38 292 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Dnajb7Q9QYI8 312 aa13.16□□□□□ -0.3
Trim56-201ENSMUST00000054384 Serpini1O35684 410 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Dnajc8Q6NZB0 253 aaKnown RBP13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Stag1Q9D3E6 1258 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Arpp21Q9DCB4 807 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Mroh9G5E8L9 891 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Timm44O35857 452 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Ftl1P29391 183 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Sap30bpQ02614 308 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Lrrd1Q8C0R9 853 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Strn3Q9ERG2 796 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 HomezQ80W88 542 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Pcdhb22Q91XZ8 794 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Sf3a3Q9D554 501 aaKnown RBP13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Prdm1Q60636 856 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Ppp1r14cQ8R4S0 164 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 RtcbQ99LF4 505 aaKnown RBP13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Gm29094F6Q785 221 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms