RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Hexim1Q8R409 356 aaKnown RBP28.32■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Slc5a4bQ91ZP4 660 aa28.32■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 CoblQ5NBX1 1337 aaKnown RBP28.32■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Cdc27A2A6Q5 825 aa28.31■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Cyp26c1B2RXA7 518 aa28.31■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Dync1i1O88485 628 aa28.31■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Q8BT18 775 aa28.31■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Calml3Q9D6P8 149 aa28.31■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Adgra3Q7TT36 1310 aa28.31■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Phldb3E9QAF4 648 aa28.31■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Tdo2P48776 406 aa28.31■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Srp68Q8BMA6 625 aaKnown RBP28.31■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Vps16Q920Q4 839 aa28.31■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 1700018B08RikQ9DA83 213 aa28.31■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 A0A1Y7VML8 143 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Sdc2P43407 202 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Irf5P56477 497 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Spg7Q3ULF4 781 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Asnsd1Q8BFS9 627 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Afg3l2Q8JZQ2 802 aaKnown RBP28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 NsmfQ99NF2 532 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 GdaQ9R111 454 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 GakQ99KY4 1305 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Prss40A6H6T1 365 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Gm10134F6ZQC6 126 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Adck5Q80V03 582 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Magi2Q9WVQ1 1275 aa28.3■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Col20a1Q923P0 1320 aa28.29■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Myo1aO88329 1043 aa28.29■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Gtf2f1Q3THK3 508 aaKnown RBP28.29■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Slc14a2Q8R4T9 930 aa28.29■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Dock5B2RY04 1868 aa28.29■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Card6E9PWH2 1175 aa28.28■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 HlfQ8BW74 295 aa28.28■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Eno4Q8C042 619 aa28.28■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Klhl30Q8C3F7 581 aa28.28■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 RtcbQ99LF4 505 aaKnown RBP28.28■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Nap1l2P51860 460 aa28.28■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Usp49Q6P9L4 685 aa28.28■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Gimap7Q8R379 293 aa28.28■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Zfyve9A2A8R0 1397 aa28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Igsf9bE9PZ19 1328 aa28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Cdcp1Q5U462 833 aa28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Cep128Q8BI22 1102 aa28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Api5O35841 504 aaKnown RBP28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Tpm1P58771 284 aa28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Trappc10Q3TLI0 1259 aa28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Zfp397Q7TNK4 527 aa28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Ankk1Q8BZ25 745 aa28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Emilin2Q8K482 1074 aa28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 RarsQ9D0I9 660 aaKnown RBP28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Dydc2Q9D3X8 139 aa28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Cbx6Q9DBY5 414 aa28.27■■■□□ 2.12
Cldnd1-201ENSMUST00000023426 Aknad1E9Q8N6 675 aa28.26■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Fam83bQ0VBM2 1012 aa28.26■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Kif22Q3V300 660 aa28.26■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Mns1Q61884 491 aa28.26■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Triml1Q8BVP1 470 aa28.26■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Brd3Q8K2F0 726 aaKnown RBP28.26■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Mtmr6Q8VE11 617 aa28.26■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Gm43738A0A0G2JEA5 862 aa28.25■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 InhbeO08717 350 aa28.25■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Pla2g4bP0C871 782 aa28.25■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 LrmpQ60664 539 aa28.25■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Trim29Q8R2Q0 587 aa28.25■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Tgs1Q923W1 853 aa28.25■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Rbm33Q9CXK9 1231 aaKnown RBP28.25■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Anks1bQ8BIZ1 1259 aa28.25■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Brms1Q99N20 246 aa28.25■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Pfkfb3A7UAK5 555 aa28.24■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 MarcksP26645 309 aaKnown RBP28.24■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Nek1P51954 1203 aa28.24■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Gas1Q01721 343 aa28.24■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Krt39Q6IFX4 482 aa28.24■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 RadxQ8C779 850 aa28.24■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Tktl2Q9D4D4 627 aa28.24■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Nmt2O70311 529 aa28.24■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Taf3Q5HZG4 932 aa28.24■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Arid3aQ62431 601 aa28.24■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Cep85Q8BMK0 761 aa28.24■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Sh3tc1G3X9F6 1346 aa28.23■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Tbx2Q60707 711 aa28.23■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 DlatQ8BMF4 642 aa28.23■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Mei4Q8BRM6 389 aa28.23■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Gm21969J3QJZ1 289 aa28.22■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Ndufb9Q9CQJ8 179 aa28.22■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Mrpl12Q9DB15 201 aaKnown RBP28.22■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Slfn1Q9Z0I7 337 aa28.22■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Myl3P09542 204 aa28.22■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Mum1l1Q4VA55 681 aa28.22■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 MycbpapQ5SUV2 932 aa28.22■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Stn1Q8K2X3 378 aa28.22■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Epb41l3Q9WV92 929 aa28.22■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Rbm6S4R1W5 1118 aaKnown RBP28.22■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 CluhQ5SW19 1315 aa28.22■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Adssl1P28650 457 aa28.21■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Scg2Q03517 617 aa28.21■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Clic6Q8BHB9 596 aa28.21■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Nup133Q8R0G9 1155 aa28.21■■■□□ 2.11
Cldnd1-201ENSMUST00000023426 Vps33aQ9D2N9 598 aa28.21■■■□□ 2.11
Retrieved 100 of 22,080 RNA–protein pairs in 186.9 ms