RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 2310050C09RikG5E8Z3 280 aa6.93□□□□□ -1.3
Scn8a-208ENSMUST00000200963 Krtap13O88375 197 aa6.91□□□□□ -1.3
Scn8a-208ENSMUST00000200963 CenpfE9Q3P4 2997 aaKnown RBP6.9□□□□□ -1.31
Scn8a-208ENSMUST00000200963 Gm9507D3Z5T3 223 aa6.87□□□□□ -1.31
Scn8a-208ENSMUST00000200963 Usp24B1AY13 2617 aaKnown RBP6.86□□□□□ -1.31
Scn8a-208ENSMUST00000200963 Ankrd11E9Q4F7 2643 aa6.85□□□□□ -1.31
Scn8a-208ENSMUST00000200963 4933415A04RikQ9D443 101 aa6.83□□□□□ -1.32
Scn8a-208ENSMUST00000200963 Gm9195A0A140LHT4 2805 aa6.83□□□□□ -1.32
Scn8a-208ENSMUST00000200963 HrnrQ8VHD8 2496 aa6.82□□□□□ -1.32
Scn8a-208ENSMUST00000200963 AtrQ9JKK8 2635 aa6.81□□□□□ -1.32
Scn8a-208ENSMUST00000200963 FlnaQ8BTM8 2647 aaKnown RBP6.81□□□□□ -1.32
Scn8a-208ENSMUST00000200963 FasnP19096 2504 aaKnown RBP6.8□□□□□ -1.32
Scn8a-208ENSMUST00000200963 1700042G07RikB1AUF7 90 aa6.8□□□□□ -1.32
Scn8a-208ENSMUST00000200963 Krtap10-4Q08EG8 221 aa6.78□□□□□ -1.32
Scn8a-208ENSMUST00000200963 Krtap14O08640 167 aa6.75□□□□□ -1.33
Scn8a-208ENSMUST00000200963 Gcn1E9PVA8 2671 aaKnown RBP6.75□□□□□ -1.33
Scn8a-208ENSMUST00000200963 Fn1P11276 2477 aaKnown RBP6.75□□□□□ -1.33
Scn8a-208ENSMUST00000200963 Gm2310J3QNJ2 377 aa6.74□□□□□ -1.33
Scn8a-208ENSMUST00000200963 FlnbQ80X90 2602 aaKnown RBP6.71□□□□□ -1.33
Scn8a-208ENSMUST00000200963 Krtap10-10A0A1W2P7T6 217 aa6.7□□□□□ -1.34
Scn8a-208ENSMUST00000200963 Cox6b2Q80ZN9 88 aa6.69□□□□□ -1.34
Scn8a-208ENSMUST00000200963 Golgb1E9PVZ8 3238 aa6.69□□□□□ -1.34
Scn8a-208ENSMUST00000200963 Rps29P62274 56 aa6.67□□□□□ -1.34
Scn8a-208ENSMUST00000200963 2310061N02RikQ9D6S9 174 aa6.64□□□□□ -1.35
Scn8a-208ENSMUST00000200963 Notch1Q01705 2531 aa6.59□□□□□ -1.35
Scn8a-208ENSMUST00000200963 Gm21887J3QQ04 176 aa6.59□□□□□ -1.35
Scn8a-208ENSMUST00000200963 Dnah12Q3V0Q1 3086 aa6.59□□□□□ -1.36
Scn8a-208ENSMUST00000200963 Tnp2P11378 117 aa6.58□□□□□ -1.36
Scn8a-208ENSMUST00000200963 Gm42715A0A087WP63 3095 aaKnown RBP6.58□□□□□ -1.36
Scn8a-208ENSMUST00000200963 Ep400Q8CHI8 3072 aaKnown RBP6.57□□□□□ -1.36
Scn8a-208ENSMUST00000200963 Stab1Q8R4Y4 2571 aa6.55□□□□□ -1.36
Scn8a-208ENSMUST00000200963 Hectd1Q69ZR2 2618 aaKnown RBP6.54□□□□□ -1.36
Scn8a-208ENSMUST00000200963 D6Ertd527eA0A0N4SWI3 464 aa6.54□□□□□ -1.36
Scn8a-208ENSMUST00000200963 Ndufaf8A2AMZ4 74 aa6.54□□□□□ -1.36
Scn8a-208ENSMUST00000200963 Prrc2cQ3TLH4 2846 aaKnown RBP6.54□□□□□ -1.36
Scn8a-208ENSMUST00000200963 Prune2Q52KR3 3084 aa6.54□□□□□ -1.36
Scn8a-208ENSMUST00000200963 Jbts17Q8CE72 3214 aa6.54□□□□□ -1.36
Scn8a-208ENSMUST00000200963 PcntP48725 2898 aa6.52□□□□□ -1.37
Scn8a-208ENSMUST00000200963 Gm2696A0A1W2P709 240 aa6.51□□□□□ -1.37
Scn8a-208ENSMUST00000200963 SmcpP15265 143 aa6.5□□□□□ -1.37
Scn8a-208ENSMUST00000200963 Bod1lE9Q6J5 3032 aa6.5□□□□□ -1.37
Scn8a-208ENSMUST00000200963 UtrnE9Q6R7 3430 aa6.49□□□□□ -1.37
Scn8a-208ENSMUST00000200963 Kmt2bO08550 2713 aa6.49□□□□□ -1.37
Scn8a-208ENSMUST00000200963 2310057N15RikQ9D6T8 200 aa6.43□□□□□ -1.38
Scn8a-208ENSMUST00000200963 NipblQ6KCD5 2798 aaKnown RBP6.43□□□□□ -1.38
Scn8a-208ENSMUST00000200963 Akap13E9Q394 2776 aa6.43□□□□□ -1.38
Scn8a-208ENSMUST00000200963 Tnp1P10856 55 aa6.42□□□□□ -1.38
Scn8a-208ENSMUST00000200963 Gm5965D3Z724 196 aa6.41□□□□□ -1.38
Scn8a-208ENSMUST00000200963 Cep350E9Q309 3095 aa6.39□□□□□ -1.39
Scn8a-208ENSMUST00000200963 Itpr3P70227 2670 aa6.37□□□□□ -1.39
Scn8a-208ENSMUST00000200963 Map1aQ9QYR6 2776 aa6.37□□□□□ -1.39
Scn8a-208ENSMUST00000200963 Mast4Q811L6 2618 aa6.36□□□□□ -1.39
Scn8a-208ENSMUST00000200963 Tep1P97499 2629 aa6.35□□□□□ -1.39
Scn8a-208ENSMUST00000200963 Igsf10Q3V1M1 2594 aa6.33□□□□□ -1.4
Scn8a-208ENSMUST00000200963 Gm9112A2AI92 75 aa6.33□□□□□ -1.4
Scn8a-208ENSMUST00000200963 TrioQ0KL02 3102 aa6.31□□□□□ -1.4
Scn8a-208ENSMUST00000200963 9530053A07RikE9PVG8 2581 aa6.3□□□□□ -1.4
Scn8a-208ENSMUST00000200963 Gm40193A0A1B0GT39 78 aa6.3□□□□□ -1.4
Scn8a-208ENSMUST00000200963 Chd6A3KFM7 2711 aa6.26□□□□□ -1.41
Scn8a-208ENSMUST00000200963 Ubr5Q80TP3 2792 aa6.24□□□□□ -1.41
Scn8a-208ENSMUST00000200963 Col12a1Q60847 3120 aa6.24□□□□□ -1.41
Scn8a-208ENSMUST00000200963 Itpr1P11881 2749 aa6.24□□□□□ -1.41
Scn8a-208ENSMUST00000200963 Stab2Q8R4U0 2559 aa6.23□□□□□ -1.41
Scn8a-208ENSMUST00000200963 Lama3Q61789 3330 aa6.23□□□□□ -1.41
Scn8a-208ENSMUST00000200963 MgaA2AWL7 3003 aaKnown RBP6.23□□□□□ -1.41
Scn8a-208ENSMUST00000200963 Dmxl1Q6PNC0 3013 aa6.22□□□□□ -1.41
Scn8a-208ENSMUST00000200963 Nbeal2Q6ZQA0 2742 aa6.22□□□□□ -1.41
Scn8a-208ENSMUST00000200963 Ash1lQ99MY8 2958 aa6.21□□□□□ -1.42
Scn8a-208ENSMUST00000200963 Gm20537G3UYK7 97 aa6.21□□□□□ -1.42
Scn8a-208ENSMUST00000200963 Tnrc18Q80WC3 2878 aa6.19□□□□□ -1.42
Scn8a-208ENSMUST00000200963 Chd7A2AJK6 2986 aaKnown RBP6.18□□□□□ -1.42
Scn8a-208ENSMUST00000200963 B930094E09RikQ8C4T2 136 aa6.15□□□□□ -1.43
Scn8a-208ENSMUST00000200963 A930033H14RikG5E8X6 103 aa6.14□□□□□ -1.43
Scn8a-208ENSMUST00000200963 Fbn2Q61555 2907 aa6.13□□□□□ -1.43
Scn8a-208ENSMUST00000200963 Ranbp2Q9ERU9 3053 aaKnown RBP6.12□□□□□ -1.43
Scn8a-208ENSMUST00000200963 Rev3lQ61493 3122 aa6.12□□□□□ -1.43
Scn8a-208ENSMUST00000200963 Pkd1l1Q8R526 2615 aa6.1□□□□□ -1.43
Scn8a-208ENSMUST00000200963 Mki67E9PVX6 3177 aaKnown RBP6.09□□□□□ -1.44
Scn8a-208ENSMUST00000200963 Myo15bI7HPW8 3033 aa6.08□□□□□ -1.44
Scn8a-208ENSMUST00000200963 Lama2Q60675 3118 aaKnown RBP6.06□□□□□ -1.44
Scn8a-208ENSMUST00000200963 FcgbpE9Q0B5 2583 aa6.03□□□□□ -1.44
Scn8a-208ENSMUST00000200963 Gm7173A0A0G2JEB6 3132 aa6.03□□□□□ -1.44
Scn8a-208ENSMUST00000200963 Itpr2Q9Z329 2701 aa6.01□□□□□ -1.45
Scn8a-208ENSMUST00000200963 KalrnA2CG49 2964 aa6.01□□□□□ -1.45
Scn8a-208ENSMUST00000200963 TgO08710 2766 aa6□□□□□ -1.45
Scn8a-208ENSMUST00000200963 Col6a5A6H584 2640 aa5.98□□□□□ -1.45
Scn8a-208ENSMUST00000200963 Muc2Q80Z19 2680 aa5.98□□□□□ -1.45
Scn8a-208ENSMUST00000200963 HttP42859 3119 aa5.97□□□□□ -1.45
Scn8a-208ENSMUST00000200963 2310079G19RikQ9D6L6 185 aa5.96□□□□□ -1.45
Scn8a-208ENSMUST00000200963 Srrm2Q8BTI8 2703 aaKnown RBP5.96□□□□□ -1.45
Scn8a-208ENSMUST00000200963 Usp34Q6ZQ93 3582 aa5.96□□□□□ -1.46
Scn8a-208ENSMUST00000200963 Gm9736A0A1W2P7N1 277 aa5.95□□□□□ -1.46
Scn8a-208ENSMUST00000200963 Celsr1O35161 3034 aa5.95□□□□□ -1.46
Scn8a-208ENSMUST00000200963 Gm9918Q8BUR5 174 aa5.95□□□□□ -1.46
Scn8a-208ENSMUST00000200963 Hivep1Q03172 2688 aa5.94□□□□□ -1.46
Scn8a-208ENSMUST00000200963 Prm2P07978 107 aa5.93□□□□□ -1.46
Scn8a-208ENSMUST00000200963 Zfhx3Q61329 3726 aa5.92□□□□□ -1.46
Scn8a-208ENSMUST00000200963 Cfap54Q8C6S9 3106 aa5.91□□□□□ -1.46
Scn8a-208ENSMUST00000200963 ApcQ61315 2845 aa5.91□□□□□ -1.46
Scn8a-208ENSMUST00000200963 BptfA2A654 3036 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 88.8 ms