RNA–Protein interactions for RNA: ENSMUST00000117269.7

Traf3-203, Transcript of TNF receptor-associated factor 3, mousemouse

TSL 1 (best) BASIC

Gene Traf3, Length 6,972 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-203ENSMUST00000117269 Gm3646F6S692 53 aa11.21□□□□□ -0.62
Traf3-203ENSMUST00000117269 Ep400Q8CHI8 3072 aaKnown RBP11.19□□□□□ -0.62
Traf3-203ENSMUST00000117269 FlnaQ8BTM8 2647 aaKnown RBP11.18□□□□□ -0.62
Traf3-203ENSMUST00000117269 Sec61bQ9CQS8 96 aaKnown RBP11.18□□□□□ -0.62
Traf3-203ENSMUST00000117269 Gm11565A2A4M7 156 aa11.18□□□□□ -0.62
Traf3-203ENSMUST00000117269 Rpl37Q9D823 97 aa11.13□□□□□ -0.63
Traf3-203ENSMUST00000117269 A730071L15RikQ8C4X0 137 aa11.13□□□□□ -0.63
Traf3-203ENSMUST00000117269 Romo1P60603 79 aa11.12□□□□□ -0.63
Traf3-203ENSMUST00000117269 Prune2Q52KR3 3084 aa11.11□□□□□ -0.63
Traf3-203ENSMUST00000117269 Dnah12Q3V0Q1 3086 aa11.1□□□□□ -0.63
Traf3-203ENSMUST00000117269 Gcn1E9PVA8 2671 aaKnown RBP11.09□□□□□ -0.63
Traf3-203ENSMUST00000117269 Hectd1Q69ZR2 2618 aaKnown RBP11.09□□□□□ -0.63
Traf3-203ENSMUST00000117269 Gm5767A0A0J9YTU8 78 aa11.07□□□□□ -0.64
Traf3-203ENSMUST00000117269 Gm9195A0A140LHT4 2805 aa11.07□□□□□ -0.64
Traf3-203ENSMUST00000117269 Gm19426M0QWC7 77 aa11.06□□□□□ -0.64
Traf3-203ENSMUST00000117269 Krtap29-1A2A5X4 342 aa11.04□□□□□ -0.64
Traf3-203ENSMUST00000117269 UtrnE9Q6R7 3430 aa11.03□□□□□ -0.64
Traf3-203ENSMUST00000117269 Jbts17Q8CE72 3214 aa11.01□□□□□ -0.65
Traf3-203ENSMUST00000117269 BC029722A0A0N4SW31 51 aa11.01□□□□□ -0.65
Traf3-203ENSMUST00000117269 Gm10382Q3V0T5 144 aa10.99□□□□□ -0.65
Traf3-203ENSMUST00000117269 TrioQ0KL02 3102 aa10.98□□□□□ -0.65
Traf3-203ENSMUST00000117269 Notch1Q01705 2531 aa10.97□□□□□ -0.65
Traf3-203ENSMUST00000117269 Krtap13O88375 197 aa10.97□□□□□ -0.65
Traf3-203ENSMUST00000117269 2310050C09RikG5E8Z3 280 aa10.95□□□□□ -0.66
Traf3-203ENSMUST00000117269 Akap13E9Q394 2776 aa10.93□□□□□ -0.66
Traf3-203ENSMUST00000117269 Gm9507D3Z5T3 223 aa10.91□□□□□ -0.66
Traf3-203ENSMUST00000117269 Stab1Q8R4Y4 2571 aa10.91□□□□□ -0.66
Traf3-203ENSMUST00000117269 Cep350E9Q309 3095 aa10.91□□□□□ -0.66
Traf3-203ENSMUST00000117269 Prrc2cQ3TLH4 2846 aaKnown RBP10.82□□□□□ -0.68
Traf3-203ENSMUST00000117269 Kmt2bO08550 2713 aa10.82□□□□□ -0.68
Traf3-203ENSMUST00000117269 Mast4Q811L6 2618 aa10.81□□□□□ -0.68
Traf3-203ENSMUST00000117269 Krtap10-4Q08EG8 221 aa10.78□□□□□ -0.68
Traf3-203ENSMUST00000117269 4933415A04RikQ9D443 101 aa10.77□□□□□ -0.69
Traf3-203ENSMUST00000117269 Itpr1P11881 2749 aa10.74□□□□□ -0.69
Traf3-203ENSMUST00000117269 Bod1lE9Q6J5 3032 aa10.74□□□□□ -0.69
Traf3-203ENSMUST00000117269 1700042G07RikB1AUF7 90 aa10.74□□□□□ -0.69
Traf3-203ENSMUST00000117269 Lama3Q61789 3330 aa10.73□□□□□ -0.69
Traf3-203ENSMUST00000117269 Igsf10Q3V1M1 2594 aa10.69□□□□□ -0.7
Traf3-203ENSMUST00000117269 Krtap14O08640 167 aa10.69□□□□□ -0.7
Traf3-203ENSMUST00000117269 Lama2Q60675 3118 aaKnown RBP10.68□□□□□ -0.7
Traf3-203ENSMUST00000117269 Krtap10-10A0A1W2P7T6 217 aa10.66□□□□□ -0.7
Traf3-203ENSMUST00000117269 Itpr3P70227 2670 aa10.62□□□□□ -0.71
Traf3-203ENSMUST00000117269 Gm2310J3QNJ2 377 aa10.62□□□□□ -0.71
Traf3-203ENSMUST00000117269 Ubr5Q80TP3 2792 aa10.6□□□□□ -0.71
Traf3-203ENSMUST00000117269 NipblQ6KCD5 2798 aaKnown RBP10.59□□□□□ -0.71
Traf3-203ENSMUST00000117269 Gm7173A0A0G2JEB6 3132 aa10.58□□□□□ -0.72
Traf3-203ENSMUST00000117269 Col12a1Q60847 3120 aa10.57□□□□□ -0.72
Traf3-203ENSMUST00000117269 9530053A07RikE9PVG8 2581 aa10.55□□□□□ -0.72
Traf3-203ENSMUST00000117269 Map1aQ9QYR6 2776 aa10.55□□□□□ -0.72
Traf3-203ENSMUST00000117269 Cox6b2Q80ZN9 88 aa10.54□□□□□ -0.72
Traf3-203ENSMUST00000117269 Myo15bI7HPW8 3033 aa10.53□□□□□ -0.72
Traf3-203ENSMUST00000117269 MgaA2AWL7 3003 aaKnown RBP10.53□□□□□ -0.72
Traf3-203ENSMUST00000117269 2310061N02RikQ9D6S9 174 aa10.51□□□□□ -0.73
Traf3-203ENSMUST00000117269 Chd6A3KFM7 2711 aa10.5□□□□□ -0.73
Traf3-203ENSMUST00000117269 Rps29P62274 56 aa10.49□□□□□ -0.73
Traf3-203ENSMUST00000117269 Mki67E9PVX6 3177 aaKnown RBP10.46□□□□□ -0.73
Traf3-203ENSMUST00000117269 Ash1lQ99MY8 2958 aa10.44□□□□□ -0.74
Traf3-203ENSMUST00000117269 Tep1P97499 2629 aa10.44□□□□□ -0.74
Traf3-203ENSMUST00000117269 Nbeal2Q6ZQA0 2742 aa10.44□□□□□ -0.74
Traf3-203ENSMUST00000117269 Fbn2Q61555 2907 aa10.4□□□□□ -0.74
Traf3-203ENSMUST00000117269 Gm21887J3QQ04 176 aa10.4□□□□□ -0.74
Traf3-203ENSMUST00000117269 HttP42859 3119 aa10.39□□□□□ -0.75
Traf3-203ENSMUST00000117269 Dmxl1Q6PNC0 3013 aa10.39□□□□□ -0.75
Traf3-203ENSMUST00000117269 Tnp2P11378 117 aa10.39□□□□□ -0.75
Traf3-203ENSMUST00000117269 Tnrc18Q80WC3 2878 aa10.38□□□□□ -0.75
Traf3-203ENSMUST00000117269 Chd7A2AJK6 2986 aaKnown RBP10.37□□□□□ -0.75
Traf3-203ENSMUST00000117269 Rev3lQ61493 3122 aa10.37□□□□□ -0.75
Traf3-203ENSMUST00000117269 Ndufaf8A2AMZ4 74 aa10.35□□□□□ -0.75
Traf3-203ENSMUST00000117269 D6Ertd527eA0A0N4SWI3 464 aa10.34□□□□□ -0.75
Traf3-203ENSMUST00000117269 Gm2696A0A1W2P709 240 aa10.34□□□□□ -0.75
Traf3-203ENSMUST00000117269 Pkd1l1Q8R526 2615 aa10.33□□□□□ -0.76
Traf3-203ENSMUST00000117269 Stab2Q8R4U0 2559 aa10.29□□□□□ -0.76
Traf3-203ENSMUST00000117269 KalrnA2CG49 2964 aa10.28□□□□□ -0.76
Traf3-203ENSMUST00000117269 SmcpP15265 143 aa10.27□□□□□ -0.77
Traf3-203ENSMUST00000117269 Usp34Q6ZQ93 3582 aa10.26□□□□□ -0.77
Traf3-203ENSMUST00000117269 Ranbp2Q9ERU9 3053 aaKnown RBP10.24□□□□□ -0.77
Traf3-203ENSMUST00000117269 Col6a5A6H584 2640 aa10.23□□□□□ -0.77
Traf3-203ENSMUST00000117269 2310057N15RikQ9D6T8 200 aa10.21□□□□□ -0.78
Traf3-203ENSMUST00000117269 Gm5965D3Z724 196 aa10.17□□□□□ -0.78
Traf3-203ENSMUST00000117269 Muc2Q80Z19 2680 aa10.16□□□□□ -0.78
Traf3-203ENSMUST00000117269 Tnp1P10856 55 aa10.14□□□□□ -0.79
Traf3-203ENSMUST00000117269 Hivep1Q03172 2688 aa10.08□□□□□ -0.8
Traf3-203ENSMUST00000117269 AtmQ62388 3066 aa10.03□□□□□ -0.8
Traf3-203ENSMUST00000117269 Celsr1O35161 3034 aa10.02□□□□□ -0.8
Traf3-203ENSMUST00000117269 Cfap54Q8C6S9 3106 aa10.02□□□□□ -0.8
Traf3-203ENSMUST00000117269 Cdh23Q99PF4 3354 aa10.02□□□□□ -0.81
Traf3-203ENSMUST00000117269 Gm9112A2AI92 75 aa10.02□□□□□ -0.81
Traf3-203ENSMUST00000117269 AspmQ8CJ27 3122 aa9.97□□□□□ -0.81
Traf3-203ENSMUST00000117269 Itpr2Q9Z329 2701 aa9.97□□□□□ -0.81
Traf3-203ENSMUST00000117269 FcgbpE9Q0B5 2583 aa9.95□□□□□ -0.82
Traf3-203ENSMUST00000117269 BptfA2A654 3036 aaKnown RBP9.94□□□□□ -0.82
Traf3-203ENSMUST00000117269 Tex15F8VPN2 2785 aa9.9□□□□□ -0.82
Traf3-203ENSMUST00000117269 Gm40193A0A1B0GT39 78 aa9.9□□□□□ -0.82
Traf3-203ENSMUST00000117269 Vps13aQ5H8C4 3166 aa9.87□□□□□ -0.83
Traf3-203ENSMUST00000117269 Igfn1Q3KNY0 2849 aa9.86□□□□□ -0.83
Traf3-203ENSMUST00000117269 Frem2Q6NVD0 3160 aa9.86□□□□□ -0.83
Traf3-203ENSMUST00000117269 Gm20537G3UYK7 97 aa9.81□□□□□ -0.84
Traf3-203ENSMUST00000117269 Unc80Q8BLN6 3261 aa9.8□□□□□ -0.84
Traf3-203ENSMUST00000117269 Srrm2Q8BTI8 2703 aaKnown RBP9.79□□□□□ -0.84
Traf3-203ENSMUST00000117269 TgO08710 2766 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms