RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 TrioQ0KL02 3102 aa9.53□□□□□ -0.88
Ubr2-201ENSMUST00000113335 UtrnE9Q6R7 3430 aa9.53□□□□□ -0.88
Ubr2-201ENSMUST00000113335 Krtap15-1Q9QZU5 150 aa9.51□□□□□ -0.89
Ubr2-201ENSMUST00000113335 Gm11565A2A4M7 156 aa9.5□□□□□ -0.89
Ubr2-201ENSMUST00000113335 FlnaQ8BTM8 2647 aaKnown RBP9.49□□□□□ -0.89
Ubr2-201ENSMUST00000113335 Notch1Q01705 2531 aa9.47□□□□□ -0.89
Ubr2-201ENSMUST00000113335 Gm16253D3Z167 63 aa9.45□□□□□ -0.9
Ubr2-201ENSMUST00000113335 Gm9195A0A140LHT4 2805 aa9.42□□□□□ -0.9
Ubr2-201ENSMUST00000113335 Prrc2cQ3TLH4 2846 aaKnown RBP9.4□□□□□ -0.9
Ubr2-201ENSMUST00000113335 Kmt2bO08550 2713 aa9.4□□□□□ -0.9
Ubr2-201ENSMUST00000113335 Akap13E9Q394 2776 aa9.39□□□□□ -0.91
Ubr2-201ENSMUST00000113335 Camk2n1Q6QWF9 78 aa9.39□□□□□ -0.91
Ubr2-201ENSMUST00000113335 Gm17349F7BGH6 99 aa9.37□□□□□ -0.91
Ubr2-201ENSMUST00000113335 Prune2Q52KR3 3084 aa9.36□□□□□ -0.91
Ubr2-201ENSMUST00000113335 Gm36176A0A1W2P8D5 158 aa9.35□□□□□ -0.91
Ubr2-201ENSMUST00000113335 Jbts17Q8CE72 3214 aa9.34□□□□□ -0.91
Ubr2-201ENSMUST00000113335 Lama3Q61789 3330 aa9.32□□□□□ -0.92
Ubr2-201ENSMUST00000113335 Romo1P60603 79 aa9.29□□□□□ -0.92
Ubr2-201ENSMUST00000113335 Rpl37Q9D823 97 aa9.29□□□□□ -0.92
Ubr2-201ENSMUST00000113335 4933415A04RikQ9D443 101 aa9.28□□□□□ -0.92
Ubr2-201ENSMUST00000113335 1700042G07RikB1AUF7 90 aa9.27□□□□□ -0.93
Ubr2-201ENSMUST00000113335 Cfap54Q8C6S9 3106 aa9.26□□□□□ -0.93
Ubr2-201ENSMUST00000113335 Fam229aB2KGE5 128 aa9.24□□□□□ -0.93
Ubr2-201ENSMUST00000113335 Krtap29-1A2A5X4 342 aa9.24□□□□□ -0.93
Ubr2-201ENSMUST00000113335 Lama2Q60675 3118 aaKnown RBP9.22□□□□□ -0.93
Ubr2-201ENSMUST00000113335 Mki67E9PVX6 3177 aaKnown RBP9.22□□□□□ -0.93
Ubr2-201ENSMUST00000113335 Gm10382Q3V0T5 144 aa9.2□□□□□ -0.94
Ubr2-201ENSMUST00000113335 Stab1Q8R4Y4 2571 aa9.19□□□□□ -0.94
Ubr2-201ENSMUST00000113335 Bod1lE9Q6J5 3032 aa9.18□□□□□ -0.94
Ubr2-201ENSMUST00000113335 Hectd1Q69ZR2 2618 aaKnown RBP9.17□□□□□ -0.94
Ubr2-201ENSMUST00000113335 Mast4Q811L6 2618 aa9.17□□□□□ -0.94
Ubr2-201ENSMUST00000113335 Gm5767A0A0J9YTU8 78 aa9.16□□□□□ -0.94
Ubr2-201ENSMUST00000113335 2310050C09RikG5E8Z3 280 aa9.16□□□□□ -0.94
Ubr2-201ENSMUST00000113335 Krtap13O88375 197 aa9.16□□□□□ -0.94
Ubr2-201ENSMUST00000113335 Sec61bQ9CQS8 96 aaKnown RBP9.11□□□□□ -0.95
Ubr2-201ENSMUST00000113335 SmcpP15265 143 aa9.11□□□□□ -0.95
Ubr2-201ENSMUST00000113335 BC029722A0A0N4SW31 51 aa9.09□□□□□ -0.95
Ubr2-201ENSMUST00000113335 NipblQ6KCD5 2798 aaKnown RBP9.08□□□□□ -0.96
Ubr2-201ENSMUST00000113335 Gm2310J3QNJ2 377 aa9.07□□□□□ -0.96
Ubr2-201ENSMUST00000113335 Map1aQ9QYR6 2776 aa9.06□□□□□ -0.96
Ubr2-201ENSMUST00000113335 Gm9507D3Z5T3 223 aa9.04□□□□□ -0.96
Ubr2-201ENSMUST00000113335 Gm19426M0QWC7 77 aa9.04□□□□□ -0.96
Ubr2-201ENSMUST00000113335 Ubr5Q80TP3 2792 aa9.02□□□□□ -0.96
Ubr2-201ENSMUST00000113335 Ranbp2Q9ERU9 3053 aaKnown RBP9.02□□□□□ -0.97
Ubr2-201ENSMUST00000113335 Tnrc18Q80WC3 2878 aa9.02□□□□□ -0.97
Ubr2-201ENSMUST00000113335 Chd6A3KFM7 2711 aa9□□□□□ -0.97
Ubr2-201ENSMUST00000113335 Usp34Q6ZQ93 3582 aa8.99□□□□□ -0.97
Ubr2-201ENSMUST00000113335 Tep1P97499 2629 aa8.97□□□□□ -0.97
Ubr2-201ENSMUST00000113335 Krtap14O08640 167 aa8.97□□□□□ -0.97
Ubr2-201ENSMUST00000113335 Col12a1Q60847 3120 aa8.96□□□□□ -0.97
Ubr2-201ENSMUST00000113335 Chd7A2AJK6 2986 aaKnown RBP8.95□□□□□ -0.98
Ubr2-201ENSMUST00000113335 9530053A07RikE9PVG8 2581 aa8.95□□□□□ -0.98
Ubr2-201ENSMUST00000113335 Ash1lQ99MY8 2958 aa8.94□□□□□ -0.98
Ubr2-201ENSMUST00000113335 Krtap10-4Q08EG8 221 aa8.94□□□□□ -0.98
Ubr2-201ENSMUST00000113335 Itpr3P70227 2670 aa8.91□□□□□ -0.98
Ubr2-201ENSMUST00000113335 Gm7173A0A0G2JEB6 3132 aa8.91□□□□□ -0.98
Ubr2-201ENSMUST00000113335 Dmxl1Q6PNC0 3013 aa8.9□□□□□ -0.98
Ubr2-201ENSMUST00000113335 Itpr1P11881 2749 aa8.88□□□□□ -0.99
Ubr2-201ENSMUST00000113335 2310061N02RikQ9D6S9 174 aa8.87□□□□□ -0.99
Ubr2-201ENSMUST00000113335 Cox6b2Q80ZN9 88 aa8.86□□□□□ -0.99
Ubr2-201ENSMUST00000113335 Ndufaf8A2AMZ4 74 aa8.85□□□□□ -0.99
Ubr2-201ENSMUST00000113335 HttP42859 3119 aa8.84□□□□□ -0.99
Ubr2-201ENSMUST00000113335 Nbeal2Q6ZQA0 2742 aa8.82□□□□□ -1
Ubr2-201ENSMUST00000113335 Krtap10-10A0A1W2P7T6 217 aa8.82□□□□□ -1
Ubr2-201ENSMUST00000113335 Stab2Q8R4U0 2559 aa8.82□□□□□ -1
Ubr2-201ENSMUST00000113335 Cdh23Q99PF4 3354 aa8.81□□□□□ -1
Ubr2-201ENSMUST00000113335 Igsf10Q3V1M1 2594 aa8.81□□□□□ -1
Ubr2-201ENSMUST00000113335 MgaA2AWL7 3003 aaKnown RBP8.8□□□□□ -1
Ubr2-201ENSMUST00000113335 Fbn2Q61555 2907 aa8.79□□□□□ -1
Ubr2-201ENSMUST00000113335 Vps13aQ5H8C4 3166 aa8.78□□□□□ -1
Ubr2-201ENSMUST00000113335 Pkd1l1Q8R526 2615 aa8.78□□□□□ -1
Ubr2-201ENSMUST00000113335 Rps29P62274 56 aa8.77□□□□□ -1.01
Ubr2-201ENSMUST00000113335 Frem2Q6NVD0 3160 aa8.77□□□□□ -1.01
Ubr2-201ENSMUST00000113335 Tnp2P11378 117 aa8.76□□□□□ -1.01
Ubr2-201ENSMUST00000113335 Unc80Q8BLN6 3261 aa8.75□□□□□ -1.01
Ubr2-201ENSMUST00000113335 D6Ertd527eA0A0N4SWI3 464 aa8.74□□□□□ -1.01
Ubr2-201ENSMUST00000113335 Rev3lQ61493 3122 aa8.72□□□□□ -1.01
Ubr2-201ENSMUST00000113335 Myo15bI7HPW8 3033 aa8.63□□□□□ -1.03
Ubr2-201ENSMUST00000113335 AtmQ62388 3066 aa8.63□□□□□ -1.03
Ubr2-201ENSMUST00000113335 Celsr3Q91ZI0 3301 aa8.61□□□□□ -1.03
Ubr2-201ENSMUST00000113335 KalrnA2CG49 2964 aa8.61□□□□□ -1.03
Ubr2-201ENSMUST00000113335 Tex15F8VPN2 2785 aa8.6□□□□□ -1.03
Ubr2-201ENSMUST00000113335 Gm9112A2AI92 75 aa8.59□□□□□ -1.03
Ubr2-201ENSMUST00000113335 Gm21887J3QQ04 176 aa8.58□□□□□ -1.04
Ubr2-201ENSMUST00000113335 Szt2A2A9C3 3431 aa8.57□□□□□ -1.04
Ubr2-201ENSMUST00000113335 Gm2696A0A1W2P709 240 aa8.56□□□□□ -1.04
Ubr2-201ENSMUST00000113335 FryE9Q8I9 3020 aa8.55□□□□□ -1.04
Ubr2-201ENSMUST00000113335 Col6a5A6H584 2640 aa8.53□□□□□ -1.04
Ubr2-201ENSMUST00000113335 Celsr1O35161 3034 aa8.53□□□□□ -1.04
Ubr2-201ENSMUST00000113335 AspmQ8CJ27 3122 aa8.5□□□□□ -1.05
Ubr2-201ENSMUST00000113335 Muc2Q80Z19 2680 aa8.49□□□□□ -1.05
Ubr2-201ENSMUST00000113335 Utp20Q5XG71 2788 aaKnown RBP8.48□□□□□ -1.05
Ubr2-201ENSMUST00000113335 BptfA2A654 3036 aaKnown RBP8.47□□□□□ -1.05
Ubr2-201ENSMUST00000113335 Lrrc37aB1AWG4 3215 aa8.46□□□□□ -1.05
Ubr2-201ENSMUST00000113335 TgO08710 2766 aa8.45□□□□□ -1.06
Ubr2-201ENSMUST00000113335 Hivep1Q03172 2688 aa8.44□□□□□ -1.06
Ubr2-201ENSMUST00000113335 FcgbpE9Q0B5 2583 aa8.44□□□□□ -1.06
Ubr2-201ENSMUST00000113335 FrylF8VQ05 3007 aa8.43□□□□□ -1.06
Ubr2-201ENSMUST00000113335 Gm5965D3Z724 196 aa8.42□□□□□ -1.06
Ubr2-201ENSMUST00000113335 Itpr2Q9Z329 2701 aa8.37□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms