RNA–Protein interactions for RNA: ENSMUST00000112390.7

Chd4-202, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd4, Length 6,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-202ENSMUST00000112390 Gm9195A0A140LHT4 2805 aa9.31□□□□□ -0.92
Chd4-202ENSMUST00000112390 Gcn1E9PVA8 2671 aaKnown RBP9.3□□□□□ -0.92
Chd4-202ENSMUST00000112390 Fn1P11276 2477 aaKnown RBP9.3□□□□□ -0.92
Chd4-202ENSMUST00000112390 Gm3646F6S692 53 aa9.29□□□□□ -0.92
Chd4-202ENSMUST00000112390 Gm42715A0A087WP63 3095 aaKnown RBP9.28□□□□□ -0.92
Chd4-202ENSMUST00000112390 Sec61bQ9CQS8 96 aaKnown RBP9.26□□□□□ -0.93
Chd4-202ENSMUST00000112390 Krtap29-1A2A5X4 342 aa9.24□□□□□ -0.93
Chd4-202ENSMUST00000112390 Dnah12Q3V0Q1 3086 aa9.22□□□□□ -0.93
Chd4-202ENSMUST00000112390 Rpl37Q9D823 97 aa9.2□□□□□ -0.94
Chd4-202ENSMUST00000112390 Gm5767A0A0J9YTU8 78 aa9.2□□□□□ -0.94
Chd4-202ENSMUST00000112390 Romo1P60603 79 aa9.18□□□□□ -0.94
Chd4-202ENSMUST00000112390 Prune2Q52KR3 3084 aa9.13□□□□□ -0.95
Chd4-202ENSMUST00000112390 PcntP48725 2898 aa9.13□□□□□ -0.95
Chd4-202ENSMUST00000112390 Krtap13O88375 197 aa9.13□□□□□ -0.95
Chd4-202ENSMUST00000112390 Jbts17Q8CE72 3214 aa9.12□□□□□ -0.95
Chd4-202ENSMUST00000112390 2310050C09RikG5E8Z3 280 aa9.12□□□□□ -0.95
Chd4-202ENSMUST00000112390 Gm19426M0QWC7 77 aa9.12□□□□□ -0.95
Chd4-202ENSMUST00000112390 BC029722A0A0N4SW31 51 aa9.11□□□□□ -0.95
Chd4-202ENSMUST00000112390 Notch1Q01705 2531 aa9.1□□□□□ -0.95
Chd4-202ENSMUST00000112390 Ep400Q8CHI8 3072 aaKnown RBP9.1□□□□□ -0.95
Chd4-202ENSMUST00000112390 Gm9507D3Z5T3 223 aa9.1□□□□□ -0.95
Chd4-202ENSMUST00000112390 Gm10382Q3V0T5 144 aa9.06□□□□□ -0.96
Chd4-202ENSMUST00000112390 Hectd1Q69ZR2 2618 aaKnown RBP9.06□□□□□ -0.96
Chd4-202ENSMUST00000112390 UtrnE9Q6R7 3430 aa9.04□□□□□ -0.96
Chd4-202ENSMUST00000112390 Prrc2cQ3TLH4 2846 aaKnown RBP9.04□□□□□ -0.96
Chd4-202ENSMUST00000112390 Stab1Q8R4Y4 2571 aa9.02□□□□□ -0.96
Chd4-202ENSMUST00000112390 Cep350E9Q309 3095 aa8.98□□□□□ -0.97
Chd4-202ENSMUST00000112390 Krtap10-4Q08EG8 221 aa8.97□□□□□ -0.97
Chd4-202ENSMUST00000112390 4933415A04RikQ9D443 101 aa8.97□□□□□ -0.97
Chd4-202ENSMUST00000112390 Bod1lE9Q6J5 3032 aa8.96□□□□□ -0.98
Chd4-202ENSMUST00000112390 Akap13E9Q394 2776 aa8.95□□□□□ -0.98
Chd4-202ENSMUST00000112390 Kmt2bO08550 2713 aa8.94□□□□□ -0.98
Chd4-202ENSMUST00000112390 Krtap14O08640 167 aa8.94□□□□□ -0.98
Chd4-202ENSMUST00000112390 1700042G07RikB1AUF7 90 aa8.91□□□□□ -0.98
Chd4-202ENSMUST00000112390 Gm2310J3QNJ2 377 aa8.89□□□□□ -0.99
Chd4-202ENSMUST00000112390 TrioQ0KL02 3102 aa8.88□□□□□ -0.99
Chd4-202ENSMUST00000112390 Krtap10-10A0A1W2P7T6 217 aa8.86□□□□□ -0.99
Chd4-202ENSMUST00000112390 2310061N02RikQ9D6S9 174 aa8.84□□□□□ -0.99
Chd4-202ENSMUST00000112390 NipblQ6KCD5 2798 aaKnown RBP8.83□□□□□ -1
Chd4-202ENSMUST00000112390 Itpr3P70227 2670 aa8.79□□□□□ -1
Chd4-202ENSMUST00000112390 Mast4Q811L6 2618 aa8.79□□□□□ -1
Chd4-202ENSMUST00000112390 Rps29P62274 56 aa8.78□□□□□ -1
Chd4-202ENSMUST00000112390 Lama3Q61789 3330 aa8.75□□□□□ -1.01
Chd4-202ENSMUST00000112390 Cox6b2Q80ZN9 88 aa8.75□□□□□ -1.01
Chd4-202ENSMUST00000112390 Igsf10Q3V1M1 2594 aa8.75□□□□□ -1.01
Chd4-202ENSMUST00000112390 Map1aQ9QYR6 2776 aa8.74□□□□□ -1.01
Chd4-202ENSMUST00000112390 Tep1P97499 2629 aa8.72□□□□□ -1.01
Chd4-202ENSMUST00000112390 Tnp2P11378 117 aa8.72□□□□□ -1.01
Chd4-202ENSMUST00000112390 Col12a1Q60847 3120 aa8.71□□□□□ -1.02
Chd4-202ENSMUST00000112390 9530053A07RikE9PVG8 2581 aa8.68□□□□□ -1.02
Chd4-202ENSMUST00000112390 Ubr5Q80TP3 2792 aa8.67□□□□□ -1.02
Chd4-202ENSMUST00000112390 Itpr1P11881 2749 aa8.66□□□□□ -1.02
Chd4-202ENSMUST00000112390 MgaA2AWL7 3003 aaKnown RBP8.66□□□□□ -1.02
Chd4-202ENSMUST00000112390 Ash1lQ99MY8 2958 aa8.65□□□□□ -1.02
Chd4-202ENSMUST00000112390 Dmxl1Q6PNC0 3013 aa8.64□□□□□ -1.03
Chd4-202ENSMUST00000112390 SmcpP15265 143 aa8.63□□□□□ -1.03
Chd4-202ENSMUST00000112390 Chd6A3KFM7 2711 aa8.63□□□□□ -1.03
Chd4-202ENSMUST00000112390 D6Ertd527eA0A0N4SWI3 464 aa8.62□□□□□ -1.03
Chd4-202ENSMUST00000112390 Gm2696A0A1W2P709 240 aa8.61□□□□□ -1.03
Chd4-202ENSMUST00000112390 Chd7A2AJK6 2986 aaKnown RBP8.6□□□□□ -1.03
Chd4-202ENSMUST00000112390 Nbeal2Q6ZQA0 2742 aa8.59□□□□□ -1.03
Chd4-202ENSMUST00000112390 Gm21887J3QQ04 176 aa8.58□□□□□ -1.04
Chd4-202ENSMUST00000112390 Mki67E9PVX6 3177 aaKnown RBP8.57□□□□□ -1.04
Chd4-202ENSMUST00000112390 Tnrc18Q80WC3 2878 aa8.57□□□□□ -1.04
Chd4-202ENSMUST00000112390 Stab2Q8R4U0 2559 aa8.57□□□□□ -1.04
Chd4-202ENSMUST00000112390 Ranbp2Q9ERU9 3053 aaKnown RBP8.54□□□□□ -1.04
Chd4-202ENSMUST00000112390 Rev3lQ61493 3122 aa8.54□□□□□ -1.04
Chd4-202ENSMUST00000112390 Fbn2Q61555 2907 aa8.54□□□□□ -1.04
Chd4-202ENSMUST00000112390 Gm7173A0A0G2JEB6 3132 aa8.52□□□□□ -1.05
Chd4-202ENSMUST00000112390 Ndufaf8A2AMZ4 74 aa8.5□□□□□ -1.05
Chd4-202ENSMUST00000112390 Lama2Q60675 3118 aaKnown RBP8.49□□□□□ -1.05
Chd4-202ENSMUST00000112390 Myo15bI7HPW8 3033 aa8.47□□□□□ -1.05
Chd4-202ENSMUST00000112390 Gm5965D3Z724 196 aa8.45□□□□□ -1.06
Chd4-202ENSMUST00000112390 Pkd1l1Q8R526 2615 aa8.45□□□□□ -1.06
Chd4-202ENSMUST00000112390 2310057N15RikQ9D6T8 200 aa8.44□□□□□ -1.06
Chd4-202ENSMUST00000112390 HttP42859 3119 aa8.41□□□□□ -1.06
Chd4-202ENSMUST00000112390 KalrnA2CG49 2964 aa8.38□□□□□ -1.07
Chd4-202ENSMUST00000112390 Usp34Q6ZQ93 3582 aa8.36□□□□□ -1.07
Chd4-202ENSMUST00000112390 Tnp1P10856 55 aa8.35□□□□□ -1.07
Chd4-202ENSMUST00000112390 Col6a5A6H584 2640 aa8.32□□□□□ -1.08
Chd4-202ENSMUST00000112390 Muc2Q80Z19 2680 aa8.29□□□□□ -1.08
Chd4-202ENSMUST00000112390 Celsr1O35161 3034 aa8.29□□□□□ -1.08
Chd4-202ENSMUST00000112390 Itpr2Q9Z329 2701 aa8.29□□□□□ -1.08
Chd4-202ENSMUST00000112390 Cfap54Q8C6S9 3106 aa8.28□□□□□ -1.08
Chd4-202ENSMUST00000112390 FcgbpE9Q0B5 2583 aa8.28□□□□□ -1.08
Chd4-202ENSMUST00000112390 Cdh23Q99PF4 3354 aa8.25□□□□□ -1.09
Chd4-202ENSMUST00000112390 Hivep1Q03172 2688 aa8.23□□□□□ -1.09
Chd4-202ENSMUST00000112390 BptfA2A654 3036 aaKnown RBP8.22□□□□□ -1.09
Chd4-202ENSMUST00000112390 TgO08710 2766 aa8.2□□□□□ -1.1
Chd4-202ENSMUST00000112390 Gm40193A0A1B0GT39 78 aa8.2□□□□□ -1.1
Chd4-202ENSMUST00000112390 Gm9112A2AI92 75 aa8.2□□□□□ -1.1
Chd4-202ENSMUST00000112390 Srrm2Q8BTI8 2703 aaKnown RBP8.17□□□□□ -1.1
Chd4-202ENSMUST00000112390 Frem2Q6NVD0 3160 aa8.17□□□□□ -1.1
Chd4-202ENSMUST00000112390 Gm20537G3UYK7 97 aa8.16□□□□□ -1.1
Chd4-202ENSMUST00000112390 Tex15F8VPN2 2785 aa8.14□□□□□ -1.11
Chd4-202ENSMUST00000112390 Unc80Q8BLN6 3261 aa8.13□□□□□ -1.11
Chd4-202ENSMUST00000112390 AtmQ62388 3066 aa8.13□□□□□ -1.11
Chd4-202ENSMUST00000112390 Utp20Q5XG71 2788 aaKnown RBP8.13□□□□□ -1.11
Chd4-202ENSMUST00000112390 ApcQ61315 2845 aa8.12□□□□□ -1.11
Chd4-202ENSMUST00000112390 Vps13aQ5H8C4 3166 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 68.4 ms