RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 FlnaQ8BTM8 2647 aaKnown RBP9.04□□□□□ -0.96
Atg4d-201ENSMUST00000065005 Krtap13O88375 197 aa9.02□□□□□ -0.97
Atg4d-201ENSMUST00000065005 Rpl37Q9D823 97 aa9.02□□□□□ -0.97
Atg4d-201ENSMUST00000065005 Gm9507D3Z5T3 223 aa9.01□□□□□ -0.97
Atg4d-201ENSMUST00000065005 BC029722A0A0N4SW31 51 aa9.01□□□□□ -0.97
Atg4d-201ENSMUST00000065005 Gm9195A0A140LHT4 2805 aa9□□□□□ -0.97
Atg4d-201ENSMUST00000065005 A730071L15RikQ8C4X0 137 aa8.99□□□□□ -0.97
Atg4d-201ENSMUST00000065005 Fn1P11276 2477 aaKnown RBP8.99□□□□□ -0.97
Atg4d-201ENSMUST00000065005 Romo1P60603 79 aa8.99□□□□□ -0.97
Atg4d-201ENSMUST00000065005 2310050C09RikG5E8Z3 280 aa8.98□□□□□ -0.97
Atg4d-201ENSMUST00000065005 Gm3646F6S692 53 aa8.97□□□□□ -0.97
Atg4d-201ENSMUST00000065005 HrnrQ8VHD8 2496 aa8.96□□□□□ -0.98
Atg4d-201ENSMUST00000065005 Gcn1E9PVA8 2671 aaKnown RBP8.91□□□□□ -0.98
Atg4d-201ENSMUST00000065005 Krtap10-4Q08EG8 221 aa8.88□□□□□ -0.99
Atg4d-201ENSMUST00000065005 Gm10382Q3V0T5 144 aa8.87□□□□□ -0.99
Atg4d-201ENSMUST00000065005 Golgb1E9PVZ8 3238 aa8.84□□□□□ -0.99
Atg4d-201ENSMUST00000065005 Gm42715A0A087WP63 3095 aaKnown RBP8.81□□□□□ -1
Atg4d-201ENSMUST00000065005 Hectd1Q69ZR2 2618 aaKnown RBP8.79□□□□□ -1
Atg4d-201ENSMUST00000065005 Krtap10-10A0A1W2P7T6 217 aa8.78□□□□□ -1
Atg4d-201ENSMUST00000065005 Krtap14O08640 167 aa8.77□□□□□ -1
Atg4d-201ENSMUST00000065005 Notch1Q01705 2531 aa8.75□□□□□ -1.01
Atg4d-201ENSMUST00000065005 Stab1Q8R4Y4 2571 aa8.74□□□□□ -1.01
Atg4d-201ENSMUST00000065005 Prune2Q52KR3 3084 aa8.74□□□□□ -1.01
Atg4d-201ENSMUST00000065005 Dnah12Q3V0Q1 3086 aa8.73□□□□□ -1.01
Atg4d-201ENSMUST00000065005 Ep400Q8CHI8 3072 aaKnown RBP8.71□□□□□ -1.01
Atg4d-201ENSMUST00000065005 Jbts17Q8CE72 3214 aa8.7□□□□□ -1.02
Atg4d-201ENSMUST00000065005 UtrnE9Q6R7 3430 aa8.68□□□□□ -1.02
Atg4d-201ENSMUST00000065005 2310061N02RikQ9D6S9 174 aa8.65□□□□□ -1.02
Atg4d-201ENSMUST00000065005 Rps29P62274 56 aa8.64□□□□□ -1.03
Atg4d-201ENSMUST00000065005 Akap13E9Q394 2776 aa8.63□□□□□ -1.03
Atg4d-201ENSMUST00000065005 Gm2310J3QNJ2 377 aa8.63□□□□□ -1.03
Atg4d-201ENSMUST00000065005 PcntP48725 2898 aa8.62□□□□□ -1.03
Atg4d-201ENSMUST00000065005 4933415A04RikQ9D443 101 aa8.61□□□□□ -1.03
Atg4d-201ENSMUST00000065005 Tnp2P11378 117 aa8.61□□□□□ -1.03
Atg4d-201ENSMUST00000065005 Bod1lE9Q6J5 3032 aa8.57□□□□□ -1.04
Atg4d-201ENSMUST00000065005 Prrc2cQ3TLH4 2846 aaKnown RBP8.56□□□□□ -1.04
Atg4d-201ENSMUST00000065005 Cox6b2Q80ZN9 88 aa8.55□□□□□ -1.04
Atg4d-201ENSMUST00000065005 Kmt2bO08550 2713 aa8.55□□□□□ -1.04
Atg4d-201ENSMUST00000065005 1700042G07RikB1AUF7 90 aa8.54□□□□□ -1.04
Atg4d-201ENSMUST00000065005 Igsf10Q3V1M1 2594 aa8.53□□□□□ -1.04
Atg4d-201ENSMUST00000065005 Gm2696A0A1W2P709 240 aa8.53□□□□□ -1.04
Atg4d-201ENSMUST00000065005 Mast4Q811L6 2618 aa8.53□□□□□ -1.04
Atg4d-201ENSMUST00000065005 Itpr3P70227 2670 aa8.51□□□□□ -1.05
Atg4d-201ENSMUST00000065005 Gm21887J3QQ04 176 aa8.48□□□□□ -1.05
Atg4d-201ENSMUST00000065005 NipblQ6KCD5 2798 aaKnown RBP8.46□□□□□ -1.06
Atg4d-201ENSMUST00000065005 Cep350E9Q309 3095 aa8.45□□□□□ -1.06
Atg4d-201ENSMUST00000065005 9530053A07RikE9PVG8 2581 aa8.44□□□□□ -1.06
Atg4d-201ENSMUST00000065005 Tep1P97499 2629 aa8.43□□□□□ -1.06
Atg4d-201ENSMUST00000065005 D6Ertd527eA0A0N4SWI3 464 aa8.4□□□□□ -1.06
Atg4d-201ENSMUST00000065005 2310057N15RikQ9D6T8 200 aa8.4□□□□□ -1.06
Atg4d-201ENSMUST00000065005 TrioQ0KL02 3102 aa8.4□□□□□ -1.07
Atg4d-201ENSMUST00000065005 Map1aQ9QYR6 2776 aa8.38□□□□□ -1.07
Atg4d-201ENSMUST00000065005 Gm5965D3Z724 196 aa8.36□□□□□ -1.07
Atg4d-201ENSMUST00000065005 Ubr5Q80TP3 2792 aa8.34□□□□□ -1.07
Atg4d-201ENSMUST00000065005 MgaA2AWL7 3003 aaKnown RBP8.33□□□□□ -1.08
Atg4d-201ENSMUST00000065005 Lama3Q61789 3330 aa8.31□□□□□ -1.08
Atg4d-201ENSMUST00000065005 Col12a1Q60847 3120 aa8.31□□□□□ -1.08
Atg4d-201ENSMUST00000065005 Nbeal2Q6ZQA0 2742 aa8.31□□□□□ -1.08
Atg4d-201ENSMUST00000065005 Itpr1P11881 2749 aa8.3□□□□□ -1.08
Atg4d-201ENSMUST00000065005 Stab2Q8R4U0 2559 aa8.26□□□□□ -1.09
Atg4d-201ENSMUST00000065005 Ndufaf8A2AMZ4 74 aa8.26□□□□□ -1.09
Atg4d-201ENSMUST00000065005 Chd6A3KFM7 2711 aa8.25□□□□□ -1.09
Atg4d-201ENSMUST00000065005 Tnp1P10856 55 aa8.25□□□□□ -1.09
Atg4d-201ENSMUST00000065005 Dmxl1Q6PNC0 3013 aa8.23□□□□□ -1.09
Atg4d-201ENSMUST00000065005 Ash1lQ99MY8 2958 aa8.22□□□□□ -1.09
Atg4d-201ENSMUST00000065005 Rev3lQ61493 3122 aa8.16□□□□□ -1.1
Atg4d-201ENSMUST00000065005 Chd7A2AJK6 2986 aaKnown RBP8.16□□□□□ -1.1
Atg4d-201ENSMUST00000065005 Pkd1l1Q8R526 2615 aa8.16□□□□□ -1.1
Atg4d-201ENSMUST00000065005 Myo15bI7HPW8 3033 aa8.14□□□□□ -1.11
Atg4d-201ENSMUST00000065005 Fbn2Q61555 2907 aa8.14□□□□□ -1.11
Atg4d-201ENSMUST00000065005 SmcpP15265 143 aa8.13□□□□□ -1.11
Atg4d-201ENSMUST00000065005 Gm7173A0A0G2JEB6 3132 aa8.08□□□□□ -1.12
Atg4d-201ENSMUST00000065005 Tnrc18Q80WC3 2878 aa8.08□□□□□ -1.12
Atg4d-201ENSMUST00000065005 Mki67E9PVX6 3177 aaKnown RBP8.08□□□□□ -1.12
Atg4d-201ENSMUST00000065005 Ranbp2Q9ERU9 3053 aaKnown RBP8.07□□□□□ -1.12
Atg4d-201ENSMUST00000065005 A930033H14RikG5E8X6 103 aa8.07□□□□□ -1.12
Atg4d-201ENSMUST00000065005 Lama2Q60675 3118 aaKnown RBP8.05□□□□□ -1.12
Atg4d-201ENSMUST00000065005 FcgbpE9Q0B5 2583 aa8.04□□□□□ -1.12
Atg4d-201ENSMUST00000065005 HttP42859 3119 aa8.03□□□□□ -1.12
Atg4d-201ENSMUST00000065005 Gm40193A0A1B0GT39 78 aa8.02□□□□□ -1.13
Atg4d-201ENSMUST00000065005 Itpr2Q9Z329 2701 aa8.01□□□□□ -1.13
Atg4d-201ENSMUST00000065005 KalrnA2CG49 2964 aa8□□□□□ -1.13
Atg4d-201ENSMUST00000065005 Col6a5A6H584 2640 aa8□□□□□ -1.13
Atg4d-201ENSMUST00000065005 Gm9112A2AI92 75 aa7.96□□□□□ -1.13
Atg4d-201ENSMUST00000065005 Usp34Q6ZQ93 3582 aa7.96□□□□□ -1.13
Atg4d-201ENSMUST00000065005 Muc2Q80Z19 2680 aa7.95□□□□□ -1.14
Atg4d-201ENSMUST00000065005 Hivep1Q03172 2688 aa7.92□□□□□ -1.14
Atg4d-201ENSMUST00000065005 Celsr1O35161 3034 aa7.91□□□□□ -1.14
Atg4d-201ENSMUST00000065005 Gm20537G3UYK7 97 aa7.91□□□□□ -1.14
Atg4d-201ENSMUST00000065005 B930094E09RikQ8C4T2 136 aa7.89□□□□□ -1.15
Atg4d-201ENSMUST00000065005 Srrm2Q8BTI8 2703 aaKnown RBP7.86□□□□□ -1.15
Atg4d-201ENSMUST00000065005 TgO08710 2766 aa7.86□□□□□ -1.15
Atg4d-201ENSMUST00000065005 BptfA2A654 3036 aaKnown RBP7.84□□□□□ -1.15
Atg4d-201ENSMUST00000065005 Cdh23Q99PF4 3354 aa7.83□□□□□ -1.16
Atg4d-201ENSMUST00000065005 Igfn1Q3KNY0 2849 aa7.83□□□□□ -1.16
Atg4d-201ENSMUST00000065005 Cfap54Q8C6S9 3106 aa7.83□□□□□ -1.16
Atg4d-201ENSMUST00000065005 Utp20Q5XG71 2788 aaKnown RBP7.77□□□□□ -1.16
Atg4d-201ENSMUST00000065005 Gm9736A0A1W2P7N1 277 aa7.77□□□□□ -1.16
Atg4d-201ENSMUST00000065005 ApcQ61315 2845 aa7.76□□□□□ -1.17
Atg4d-201ENSMUST00000065005 Tex15F8VPN2 2785 aa7.75□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 82.8 ms