RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 LEMD3Q9Y2U8 911 aa20.49■□□□□ 0.87
PHGDH-234ENST00000642041 U3KPZ7 1027 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-234ENST00000642041 CCDC171Q6TFL3 1326 aa20.49■□□□□ 0.87
PHGDH-234ENST00000642041 ZSWIM8A7E2V4 1837 aa20.48■□□□□ 0.87
PHGDH-234ENST00000642041 CLRN2A0PK11 232 aa20.48■□□□□ 0.87
PHGDH-234ENST00000642041 KCNJ4P48050 445 aa20.48■□□□□ 0.87
PHGDH-234ENST00000642041 TSGA10IPQ3SY00 556 aa20.48■□□□□ 0.87
PHGDH-234ENST00000642041 PCDHAC2Q9Y5I4 1007 aa20.48■□□□□ 0.87
PHGDH-234ENST00000642041 OTOFQ9HC10 1997 aa20.47■□□□□ 0.87
PHGDH-234ENST00000642041 SPDYE2BA6NHP3 402 aa20.47■□□□□ 0.87
PHGDH-234ENST00000642041 RNF113AO15541 343 aaKnown RBP20.47■□□□□ 0.87
PHGDH-234ENST00000642041 SPDYE6P0CI01 402 aa20.47■□□□□ 0.87
PHGDH-234ENST00000642041 RASA3Q14644 834 aa20.47■□□□□ 0.87
PHGDH-234ENST00000642041 CAVIN4Q5BKX8 364 aa20.47■□□□□ 0.87
PHGDH-234ENST00000642041 CNKSR2Q8WXI2 1034 aa20.47■□□□□ 0.87
PHGDH-234ENST00000642041 VEZTQ9HBM0 779 aa20.47■□□□□ 0.87
PHGDH-234ENST00000642041 ZCCHC17Q9NP64 241 aaKnown RBP20.47■□□□□ 0.87
PHGDH-234ENST00000642041 CTNNA3Q9UI47 895 aa20.47■□□□□ 0.87
PHGDH-234ENST00000642041 EVI5O60447 810 aa20.46■□□□□ 0.87
PHGDH-234ENST00000642041 FARP2O94887 1054 aaPredicted RBP20.46■□□□□ 0.87
PHGDH-234ENST00000642041 CCL5P13501 91 aa20.46■□□□□ 0.87
PHGDH-234ENST00000642041 GRK4P32298 578 aa20.46■□□□□ 0.87
PHGDH-234ENST00000642041 NMIQ13287 307 aaPredicted RBP20.46■□□□□ 0.87
PHGDH-234ENST00000642041 CFAP100Q494V2 611 aa20.46■□□□□ 0.87
PHGDH-234ENST00000642041 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.46■□□□□ 0.87
PHGDH-234ENST00000642041 PRMT6Q96LA8 375 aaPredicted RBP20.46■□□□□ 0.87
PHGDH-234ENST00000642041 DSCC1Q9BVC3 393 aa20.46■□□□□ 0.87
PHGDH-234ENST00000642041 RNF208Q9H0X6 261 aa20.46■□□□□ 0.87
PHGDH-234ENST00000642041 CHMP5Q9NZZ3 219 aa20.46■□□□□ 0.87
PHGDH-234ENST00000642041 SRRDQ9UH36 339 aa20.46■□□□□ 0.87
PHGDH-234ENST00000642041 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.46■□□□□ 0.87
PHGDH-234ENST00000642041 HMGB1P09429 215 aaKnown RBP20.45■□□□□ 0.86
PHGDH-234ENST00000642041 ANKRD1Q15327 319 aa20.45■□□□□ 0.86
PHGDH-234ENST00000642041 CERS5Q8N5B7 392 aa20.45■□□□□ 0.86
PHGDH-234ENST00000642041 HELBQ8NG08 1087 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-234ENST00000642041 GOLIM4O00461 696 aa20.44■□□□□ 0.86
PHGDH-234ENST00000642041 HOXD10P28358 340 aa20.44■□□□□ 0.86
PHGDH-234ENST00000642041 NECTIN1Q15223 517 aa20.44■□□□□ 0.86
PHGDH-234ENST00000642041 UBE3CQ15386 1083 aa20.44■□□□□ 0.86
PHGDH-234ENST00000642041 ZMYM1Q5SVZ6 1142 aa20.44■□□□□ 0.86
PHGDH-234ENST00000642041 RAET1EQ8TD07 263 aa20.44■□□□□ 0.86
PHGDH-234ENST00000642041 PDS5AQ29RF7 1337 aaKnown RBP20.44■□□□□ 0.86
PHGDH-234ENST00000642041 VCANP13611 3396 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 TAF5LO75529 589 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 KLRK1P26718 216 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 BMP8BP34820 402 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 NEK4P51957 841 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 MAP3K9P80192 1104 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 MAP3K12Q12852 859 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 VGLL4Q14135 290 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 CCDC102BQ68D86 513 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 U2AF1L4Q8WU68 220 aaKnown RBP20.43■□□□□ 0.86
PHGDH-234ENST00000642041 TRIM47Q96LD4 638 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 ALDH8A1Q9H2A2 487 aaPredicted RBP20.43■□□□□ 0.86
PHGDH-234ENST00000642041 CD209Q9NNX6 404 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 MTMR10Q9NXD2 777 aa20.43■□□□□ 0.86
PHGDH-234ENST00000642041 CETPP11597 493 aa20.42■□□□□ 0.86
PHGDH-234ENST00000642041 PSMC4P43686 418 aa20.42■□□□□ 0.86
PHGDH-234ENST00000642041 UBXN2AP68543 259 aa20.42■□□□□ 0.86
PHGDH-234ENST00000642041 Q7L0L9 218 aa20.42■□□□□ 0.86
PHGDH-234ENST00000642041 APPBP2Q92624 585 aa20.42■□□□□ 0.86
PHGDH-234ENST00000642041 INTS4Q96HW7 963 aaKnown RBP20.42■□□□□ 0.86
PHGDH-234ENST00000642041 ZSCAN31Q96LW9 406 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-234ENST00000642041 BTBD19C9JJ37 291 aa20.41■□□□□ 0.86
PHGDH-234ENST00000642041 PTMSP20962 102 aa20.41■□□□□ 0.86
PHGDH-234ENST00000642041 OSBPP22059 807 aa20.41■□□□□ 0.86
PHGDH-234ENST00000642041 CTGFP29279 349 aa20.41■□□□□ 0.86
PHGDH-234ENST00000642041 TNFAIP1Q13829 316 aa20.41■□□□□ 0.86
PHGDH-234ENST00000642041 C17orf99Q6UX52 265 aa20.41■□□□□ 0.86
PHGDH-234ENST00000642041 GDF15Q99988 308 aa20.41■□□□□ 0.86
PHGDH-234ENST00000642041 DENND2AQ9ULE3 1009 aa20.41■□□□□ 0.86
PHGDH-234ENST00000642041 CSADQ9Y600 493 aa20.41■□□□□ 0.86
PHGDH-234ENST00000642041 CYP46A1Q9Y6A2 500 aa20.41■□□□□ 0.86
PHGDH-234ENST00000642041 F8W031 263 aaPredicted RBP20.4■□□□□ 0.86
PHGDH-234ENST00000642041 SGPL1O95470 568 aa20.4■□□□□ 0.86
PHGDH-234ENST00000642041 CAPN2P17655 700 aa20.4■□□□□ 0.86
PHGDH-234ENST00000642041 VPS53Q5VIR6 699 aa20.4■□□□□ 0.86
PHGDH-234ENST00000642041 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.4■□□□□ 0.86
PHGDH-234ENST00000642041 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.4■□□□□ 0.86
PHGDH-234ENST00000642041 ANP32EQ9BTT0 268 aa20.4■□□□□ 0.86
PHGDH-234ENST00000642041 BIN2Q9UBW5 565 aaPredicted RBP20.4■□□□□ 0.86
PHGDH-234ENST00000642041 RBM8AQ9Y5S9 174 aaKnown RBP20.4■□□□□ 0.86
PHGDH-234ENST00000642041 RPAP1Q9BWH6 1393 aaPredicted RBP20.39■□□□□ 0.85
PHGDH-234ENST00000642041 SPDYE5A6NIY4 337 aa20.39■□□□□ 0.85
PHGDH-234ENST00000642041 ADORA1P30542 326 aa20.39■□□□□ 0.85
PHGDH-234ENST00000642041 FKBP1AP62942 108 aaKnown RBP20.39■□□□□ 0.85
PHGDH-234ENST00000642041 NUCB2P80303 420 aa20.39■□□□□ 0.85
PHGDH-234ENST00000642041 LRIT3Q3SXY7 679 aa20.39■□□□□ 0.85
PHGDH-234ENST00000642041 VPS37DQ86XT2 251 aa20.39■□□□□ 0.85
PHGDH-234ENST00000642041 FAM227BQ96M60 508 aa20.39■□□□□ 0.85
PHGDH-234ENST00000642041 TEPSINQ96N21 525 aa20.39■□□□□ 0.85
PHGDH-234ENST00000642041 SNX14Q9Y5W7 946 aa20.39■□□□□ 0.85
PHGDH-234ENST00000642041 MYPNQ86TC9 1320 aa20.38■□□□□ 0.85
PHGDH-234ENST00000642041 A0A0D9SFI3 127 aa20.38■□□□□ 0.85
PHGDH-234ENST00000642041 ECM2O94769 699 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-234ENST00000642041 GNAT2P19087 354 aa20.38■□□□□ 0.85
PHGDH-234ENST00000642041 C15orf52Q6ZUT6 534 aaKnown RBP20.38■□□□□ 0.85
PHGDH-234ENST00000642041 ZGPATQ8N5A5 531 aaKnown RBP20.38■□□□□ 0.85
PHGDH-234ENST00000642041 SPATA5Q8NB90 893 aa20.38■□□□□ 0.85
PHGDH-234ENST00000642041 ZSWIM6Q9HCJ5 1215 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms