RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 TRIM34Q9BYJ4 488 aa17.21■□□□□ 0.35
SDHD-209ENST00000640554 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
SDHD-209ENST00000640554 COL13A1Q5TAT6 717 aaPredicted RBP17.2■□□□□ 0.34
SDHD-209ENST00000640554 CRACR2BQ8N4Y2 399 aaPredicted RBP17.2■□□□□ 0.34
SDHD-209ENST00000640554 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
SDHD-209ENST00000640554 EHD4Q9H223 541 aa17.2■□□□□ 0.34
SDHD-209ENST00000640554 ATP8A2Q9NTI2 1148 aa17.2■□□□□ 0.34
SDHD-209ENST00000640554 KCNH4Q9UQ05 1017 aa17.2■□□□□ 0.34
SDHD-209ENST00000640554 CCL15-CCL14A0A0B4J2E2 113 aa17.19■□□□□ 0.34
SDHD-209ENST00000640554 IRF6O14896 467 aa17.19■□□□□ 0.34
SDHD-209ENST00000640554 CCL15Q16663 113 aa17.19■□□□□ 0.34
SDHD-209ENST00000640554 DDRGK1Q96HY6 314 aa17.19■□□□□ 0.34
SDHD-209ENST00000640554 PALD1Q9ULE6 856 aa17.19■□□□□ 0.34
SDHD-209ENST00000640554 SALL3Q9BXA9 1300 aa17.19■□□□□ 0.34
SDHD-209ENST00000640554 RNF113AO15541 343 aaKnown RBP17.18■□□□□ 0.34
SDHD-209ENST00000640554 IGHDP01880 384 aa17.18■□□□□ 0.34
SDHD-209ENST00000640554 PTPRAP18433 802 aa17.18■□□□□ 0.34
SDHD-209ENST00000640554 CAP2P40123 477 aa17.18■□□□□ 0.34
SDHD-209ENST00000640554 PDE1AP54750 535 aa17.18■□□□□ 0.34
SDHD-209ENST00000640554 NUCB1Q02818 461 aa17.18■□□□□ 0.34
SDHD-209ENST00000640554 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
SDHD-209ENST00000640554 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
SDHD-209ENST00000640554 SERPINB13Q9UIV8 391 aa17.18■□□□□ 0.34
SDHD-209ENST00000640554 ZHX2Q9Y6X8 837 aa17.18■□□□□ 0.34
SDHD-209ENST00000640554 IGF2BP3O00425 579 aaKnown RBP eCLIP17.17■□□□□ 0.34
SDHD-209ENST00000640554 POLR3DP05423 398 aaPredicted RBP17.17■□□□□ 0.34
SDHD-209ENST00000640554 ASNSP08243 561 aa17.17■□□□□ 0.34
SDHD-209ENST00000640554 FASTKD5Q7L8L6 764 aaKnown RBP17.17■□□□□ 0.34
SDHD-209ENST00000640554 AMOTL1Q8IY63 956 aa17.17■□□□□ 0.34
SDHD-209ENST00000640554 BRI3BPQ8WY22 251 aa17.17■□□□□ 0.34
SDHD-209ENST00000640554 APPBP2Q92624 585 aa17.17■□□□□ 0.34
SDHD-209ENST00000640554 TSKSQ9UJT2 592 aa17.17■□□□□ 0.34
SDHD-209ENST00000640554 MBD4O95243 580 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 TBC1D8O95759 1140 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 TSHZ3Q63HK5 1081 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 GIMAP6Q6P9H5 292 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 TNS4Q8IZW8 715 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 LCORLQ8N3X6 602 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 OTUD7AQ8TE49 926 aaPredicted RBP17.16■□□□□ 0.34
SDHD-209ENST00000640554 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 PTPN18Q99952 460 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 ARMT1Q9H993 441 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 AS3MTQ9HBK9 375 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 DCP1AQ9NPI6 582 aaPredicted RBP17.16■□□□□ 0.34
SDHD-209ENST00000640554 MCM9Q9NXL9 1143 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 SAP30BPQ9UHR5 308 aaKnown RBP17.16■□□□□ 0.34
SDHD-209ENST00000640554 AFG3L2Q9Y4W6 797 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 DOCK2Q92608 1830 aa17.16■□□□□ 0.34
SDHD-209ENST00000640554 USP17L5A8MUK1 530 aa17.15■□□□□ 0.34
SDHD-209ENST00000640554 GPR25O00155 361 aa17.15■□□□□ 0.34
SDHD-209ENST00000640554 GNAT2P19087 354 aa17.15■□□□□ 0.34
SDHD-209ENST00000640554 B4GALNT3Q6L9W6 998 aa17.15■□□□□ 0.34
SDHD-209ENST00000640554 TATDN1Q6P1N9 297 aa17.15■□□□□ 0.34
SDHD-209ENST00000640554 ANKRD23Q86SG2 305 aa17.15■□□□□ 0.34
SDHD-209ENST00000640554 OSBPL3Q9H4L5 887 aa17.15■□□□□ 0.34
SDHD-209ENST00000640554 ZFYVE28Q9HCC9 887 aa17.15■□□□□ 0.34
SDHD-209ENST00000640554 STRBPQ96SI9 672 aaKnown RBP17.14■□□□□ 0.33
SDHD-209ENST00000640554 FSD1Q9BTV5 496 aa17.14■□□□□ 0.33
SDHD-209ENST00000640554 PUS7LQ9H0K6 701 aaKnown RBP17.14■□□□□ 0.33
SDHD-209ENST00000640554 A0A0G2JLL6 359 aaPredicted RBP17.13■□□□□ 0.33
SDHD-209ENST00000640554 FAM196BA6NMK8 535 aa17.13■□□□□ 0.33
SDHD-209ENST00000640554 FKTNO75072 461 aa17.13■□□□□ 0.33
SDHD-209ENST00000640554 TAF1CQ15572 869 aaPredicted RBP17.13■□□□□ 0.33
SDHD-209ENST00000640554 PRRT2Q7Z6L0 340 aaPredicted RBP17.13■□□□□ 0.33
SDHD-209ENST00000640554 ZNF280CQ8ND82 737 aa17.13■□□□□ 0.33
SDHD-209ENST00000640554 SDR42E1Q8WUS8 393 aa17.13■□□□□ 0.33
SDHD-209ENST00000640554 WDR18Q9BV38 432 aa17.13■□□□□ 0.33
SDHD-209ENST00000640554 SWAP70Q9UH65 585 aa17.13■□□□□ 0.33
SDHD-209ENST00000640554 SLC45A1Q9Y2W3 748 aa17.13■□□□□ 0.33
SDHD-209ENST00000640554 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
SDHD-209ENST00000640554 AK9Q5TCS8 1911 aa17.13■□□□□ 0.33
SDHD-209ENST00000640554 BTBD19C9JJ37 291 aa17.12■□□□□ 0.33
SDHD-209ENST00000640554 ARHGEF6Q15052 776 aa17.12■□□□□ 0.33
SDHD-209ENST00000640554 FAM43AQ8N2R8 423 aa17.12■□□□□ 0.33
SDHD-209ENST00000640554 OSBP2Q969R2 916 aa17.12■□□□□ 0.33
SDHD-209ENST00000640554 DNAJC18Q9H819 358 aa17.12■□□□□ 0.33
SDHD-209ENST00000640554 SLURP2P0DP57 97 aa17.11■□□□□ 0.33
SDHD-209ENST00000640554 PLCD1P51178 756 aa17.11■□□□□ 0.33
SDHD-209ENST00000640554 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
SDHD-209ENST00000640554 GABPAQ06546 454 aa17.11■□□□□ 0.33
SDHD-209ENST00000640554 CRHR2Q13324 411 aa17.11■□□□□ 0.33
SDHD-209ENST00000640554 PKN2Q16513 984 aaKnown RBP17.11■□□□□ 0.33
SDHD-209ENST00000640554 CERKLQ49MI3 558 aaPredicted RBP17.11■□□□□ 0.33
SDHD-209ENST00000640554 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
SDHD-209ENST00000640554 ZNF296Q8WUU4 475 aaPredicted RBP17.11■□□□□ 0.33
SDHD-209ENST00000640554 CABP5Q9NP86 173 aa17.11■□□□□ 0.33
SDHD-209ENST00000640554 OTOFQ9HC10 1997 aa17.1■□□□□ 0.33
SDHD-209ENST00000640554 C19orf81C9J6K1 198 aa17.1■□□□□ 0.33
SDHD-209ENST00000640554 PRKAB2O43741 272 aa17.1■□□□□ 0.33
SDHD-209ENST00000640554 TLR2O60603 784 aa17.1■□□□□ 0.33
SDHD-209ENST00000640554 SPP2Q13103 211 aa17.1■□□□□ 0.33
SDHD-209ENST00000640554 PABPC4Q13310 644 aaKnown RBP eCLIP17.1■□□□□ 0.33
SDHD-209ENST00000640554 SLFNL1Q499Z3 407 aa17.1■□□□□ 0.33
SDHD-209ENST00000640554 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
SDHD-209ENST00000640554 ZMYM1Q5SVZ6 1142 aa17.1■□□□□ 0.33
SDHD-209ENST00000640554 C12orf60Q5U649 245 aa17.1■□□□□ 0.33
SDHD-209ENST00000640554 CTU1Q7Z7A3 348 aaKnown RBP17.1■□□□□ 0.33
SDHD-209ENST00000640554 PROCA1Q8NCQ7 364 aaPredicted RBP17.1■□□□□ 0.33
SDHD-209ENST00000640554 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms