RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 RLBP1P12271 317 aa9.38□□□□□ -0.91
RFC1-217ENST00000639695 GRM2Q14416 872 aa9.38□□□□□ -0.91
RFC1-217ENST00000639695 CCNJLQ8IV13 435 aa9.38□□□□□ -0.91
RFC1-217ENST00000639695 C8AP07357 584 aa9.37□□□□□ -0.91
RFC1-217ENST00000639695 FGRP09769 529 aa9.37□□□□□ -0.91
RFC1-217ENST00000639695 AKAP4Q5JQC9 854 aa9.37□□□□□ -0.91
RFC1-217ENST00000639695 KIAA0319Q5VV43 1072 aa9.37□□□□□ -0.91
RFC1-217ENST00000639695 SEZ6L2Q6UXD5 910 aa9.37□□□□□ -0.91
RFC1-217ENST00000639695 DYMQ7RTS9 669 aa9.37□□□□□ -0.91
RFC1-217ENST00000639695 SEC16BQ96JE7 1060 aa9.37□□□□□ -0.91
RFC1-217ENST00000639695 SPON2Q9BUD6 331 aa9.37□□□□□ -0.91
RFC1-217ENST00000639695 ACSS3Q9H6R3 686 aa9.37□□□□□ -0.91
RFC1-217ENST00000639695 COPRSQ9NQ92 184 aa9.37□□□□□ -0.91
RFC1-217ENST00000639695 KBTBD4Q9NVX7 518 aa9.37□□□□□ -0.91
RFC1-217ENST00000639695 XRCC5P13010 732 aaKnown RBP9.36□□□□□ -0.91
RFC1-217ENST00000639695 POU4F3Q15319 338 aa9.36□□□□□ -0.91
RFC1-217ENST00000639695 CCDC85BQ15834 202 aaPredicted RBP9.36□□□□□ -0.91
RFC1-217ENST00000639695 ZNF574Q6ZN55 896 aaPredicted RBP9.36□□□□□ -0.91
RFC1-217ENST00000639695 KIAA0825Q8IV33 1275 aa9.36□□□□□ -0.91
RFC1-217ENST00000639695 CKAP2LQ8IYA6 745 aa9.36□□□□□ -0.91
RFC1-217ENST00000639695 POU5F2Q8N7G0 328 aa9.36□□□□□ -0.91
RFC1-217ENST00000639695 YIPF2Q9BWQ6 316 aa9.36□□□□□ -0.91
RFC1-217ENST00000639695 OSBPL2Q9H1P3 480 aa9.36□□□□□ -0.91
RFC1-217ENST00000639695 CLEC4MQ9H2X3 399 aaPredicted RBP9.36□□□□□ -0.91
RFC1-217ENST00000639695 ZFYVE1Q9HBF4 777 aa9.36□□□□□ -0.91
RFC1-217ENST00000639695 C1GALT1Q9NS00 363 aa9.36□□□□□ -0.91
RFC1-217ENST00000639695 SSBP05455 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
RFC1-217ENST00000639695 ANKRD13AQ8IZ07 590 aa9.35□□□□□ -0.91
RFC1-217ENST00000639695 RASGRP4Q8TDF6 673 aa9.35□□□□□ -0.91
RFC1-217ENST00000639695 ASIC4Q96FT7 647 aa9.35□□□□□ -0.91
RFC1-217ENST00000639695 LGR6Q9HBX8 967 aa9.35□□□□□ -0.91
RFC1-217ENST00000639695 PPM1HQ9ULR3 514 aa9.35□□□□□ -0.91
RFC1-217ENST00000639695 PAPLNO95428 1278 aa9.34□□□□□ -0.91
RFC1-217ENST00000639695 NFE2L2Q16236 605 aa9.34□□□□□ -0.91
RFC1-217ENST00000639695 SPRED2Q7Z698 418 aa9.34□□□□□ -0.91
RFC1-217ENST00000639695 GSX1Q9H4S2 264 aaPredicted RBP9.34□□□□□ -0.91
RFC1-217ENST00000639695 LIN7BQ9HAP6 207 aa9.34□□□□□ -0.91
RFC1-217ENST00000639695 GBP2P32456 591 aaPredicted RBP9.33□□□□□ -0.92
RFC1-217ENST00000639695 FCGRTP55899 365 aa9.33□□□□□ -0.92
RFC1-217ENST00000639695 MAP7Q14244 749 aa9.33□□□□□ -0.92
RFC1-217ENST00000639695 NBPF6Q5VWK0 638 aa9.33□□□□□ -0.92
RFC1-217ENST00000639695 DUSP27Q5VZP5 1158 aa9.33□□□□□ -0.92
RFC1-217ENST00000639695 BCL7CQ8WUZ0 217 aaPredicted RBP9.33□□□□□ -0.92
RFC1-217ENST00000639695 NBPF4Q96M43 638 aa9.33□□□□□ -0.92
RFC1-217ENST00000639695 AP4E1Q9UPM8 1137 aa9.33□□□□□ -0.92
RFC1-217ENST00000639695 MINDY4BA8MYZ0 360 aa9.32□□□□□ -0.92
RFC1-217ENST00000639695 JUNBP17275 347 aaPredicted RBP9.32□□□□□ -0.92
RFC1-217ENST00000639695 EIF4A3P38919 411 aaKnown RBP9.32□□□□□ -0.92
RFC1-217ENST00000639695 DTHD1Q6ZMT9 781 aa9.32□□□□□ -0.92
RFC1-217ENST00000639695 TMEM74Q96NL1 305 aa9.32□□□□□ -0.92
RFC1-217ENST00000639695 AKAP2Q9Y2D5 859 aa9.32□□□□□ -0.92
RFC1-217ENST00000639695 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.31□□□□□ -0.92
RFC1-217ENST00000639695 CYP11A1P05108 521 aa9.31□□□□□ -0.92
RFC1-217ENST00000639695 ASPAP45381 313 aa9.31□□□□□ -0.92
RFC1-217ENST00000639695 SDE2Q6IQ49 451 aa9.31□□□□□ -0.92
RFC1-217ENST00000639695 PRPF40BQ6NWY9 871 aaKnown RBP9.31□□□□□ -0.92
RFC1-217ENST00000639695 SV2BQ7L1I2 683 aa9.31□□□□□ -0.92
RFC1-217ENST00000639695 AGBL5Q8NDL9 886 aa9.31□□□□□ -0.92
RFC1-217ENST00000639695 C3orf58Q8NDZ4 430 aa9.31□□□□□ -0.92
RFC1-217ENST00000639695 ANKRD24Q8TF21 1146 aa9.31□□□□□ -0.92
RFC1-217ENST00000639695 MRFAP1L1Q96HT8 127 aa9.31□□□□□ -0.92
RFC1-217ENST00000639695 PPP1R9AQ9ULJ8 1098 aa9.31□□□□□ -0.92
RFC1-217ENST00000639695 DAGLAQ9Y4D2 1042 aa9.31□□□□□ -0.92
RFC1-217ENST00000639695 TMEM238LA0A1B0GVL6 79 aa9.3□□□□□ -0.92
RFC1-217ENST00000639695 CLSTN1O94985 981 aa9.3□□□□□ -0.92
RFC1-217ENST00000639695 B3GALT4O96024 378 aa9.3□□□□□ -0.92
RFC1-217ENST00000639695 GLIS3Q8NEA6 775 aa9.3□□□□□ -0.92
RFC1-217ENST00000639695 WDR18Q9BV38 432 aa9.3□□□□□ -0.92
RFC1-217ENST00000639695 CEP44Q9C0F1 390 aa9.3□□□□□ -0.92
RFC1-217ENST00000639695 PIF1Q9H611 641 aa9.3□□□□□ -0.92
RFC1-217ENST00000639695 RAD18Q9NS91 495 aa9.3□□□□□ -0.92
RFC1-217ENST00000639695 STRIP2Q9ULQ0 834 aa9.3□□□□□ -0.92
RFC1-217ENST00000639695 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.3□□□□□ -0.92
RFC1-217ENST00000639695 U3KQE9 123 aa9.3□□□□□ -0.92
RFC1-217ENST00000639695 AOC2O75106 756 aa9.29□□□□□ -0.92
RFC1-217ENST00000639695 CYP27A1Q02318 531 aa9.29□□□□□ -0.92
RFC1-217ENST00000639695 BNIP3Q12983 259 aa9.29□□□□□ -0.92
RFC1-217ENST00000639695 COL9A2Q14055 689 aaPredicted RBP9.29□□□□□ -0.92
RFC1-217ENST00000639695 BMS1Q14692 1282 aaKnown RBP9.29□□□□□ -0.92
RFC1-217ENST00000639695 ZNF576Q9H609 170 aa9.29□□□□□ -0.92
RFC1-217ENST00000639695 ADAMTS1Q9UHI8 967 aa9.29□□□□□ -0.92
RFC1-217ENST00000639695 CARMIL2Q6F5E8 1435 aa9.29□□□□□ -0.92
RFC1-217ENST00000639695 NASPP49321 788 aaPredicted RBP9.28□□□□□ -0.92
RFC1-217ENST00000639695 ZNF792Q3KQV3 632 aa9.28□□□□□ -0.92
RFC1-217ENST00000639695 ZNF648Q5T619 568 aaPredicted RBP9.28□□□□□ -0.92
RFC1-217ENST00000639695 OGFOD3Q6PK18 319 aa9.28□□□□□ -0.92
RFC1-217ENST00000639695 ZNF296Q8WUU4 475 aaPredicted RBP9.28□□□□□ -0.92
RFC1-217ENST00000639695 WDR89Q96FK6 387 aaPredicted RBP9.28□□□□□ -0.92
RFC1-217ENST00000639695 CORO1BQ9BR76 489 aa9.28□□□□□ -0.92
RFC1-217ENST00000639695 EFR3BQ9Y2G0 817 aa9.28□□□□□ -0.92
RFC1-217ENST00000639695 U2SURPO15042 1029 aaKnown RBP9.27□□□□□ -0.93
RFC1-217ENST00000639695 LCE4AQ5TA78 99 aa9.27□□□□□ -0.93
RFC1-217ENST00000639695 ZNF746Q6NUN9 644 aaPredicted RBP9.27□□□□□ -0.93
RFC1-217ENST00000639695 CPLX3Q8WVH0 158 aa9.27□□□□□ -0.93
RFC1-217ENST00000639695 SLC5A6Q9Y289 635 aa9.27□□□□□ -0.93
RFC1-217ENST00000639695 TBX22Q9Y458 520 aa9.27□□□□□ -0.93
RFC1-217ENST00000639695 SUPT16HQ9Y5B9 1047 aaKnown RBP9.27□□□□□ -0.93
RFC1-217ENST00000639695 EIF4EBP3O60516 100 aaPredicted RBP9.26□□□□□ -0.93
RFC1-217ENST00000639695 PLCL1Q15111 1095 aa9.26□□□□□ -0.93
RFC1-217ENST00000639695 MAP3K11Q16584 847 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms