RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 LUC7L2Q9Y383 392 aaKnown RBP9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 SPATA31D1Q6ZQQ2 1576 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 C6orf229H3BNL8 230 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 GNA11P29992 359 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 RFC4P35249 363 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 TUBB2AQ13885 445 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 TTC38Q5R3I4 469 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 ZNF654Q8IZM8 581 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 TIGD1Q96MW7 591 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 TUBB2BQ9BVA1 445 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 NRBP1Q9UHY1 535 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 SPECC1LQ69YQ0 1117 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 OSBP2Q969R2 916 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 CARD10Q9BWT7 1032 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 NAA15Q9BXJ9 866 aaKnown RBP9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 WDR17Q8IZU2 1322 aa9.73□□□□□ -0.85
HNRNPU-219ENST00000639628 RPAP1Q9BWH6 1393 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 PPP6R2O75170 966 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 PPP1R2P41236 205 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 ODF2Q5BJF6 829 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 C11orf57Q6ZUT1 292 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 ZNF804AQ7Z570 1209 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 TRIML1Q8N9V2 468 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 NGLY1Q96IV0 654 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 TTF2Q9UNY4 1162 aaKnown RBP9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 CALRP27797 417 aaKnown RBP9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 LMAN1P49257 510 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 PPP2R3AQ06190 1150 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 GABPB1Q06547 395 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 APOA5Q6Q788 366 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 KRBA2Q6ZNG9 492 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 SLAIN2Q9P270 581 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 PSDA5PKW4 1024 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 PLCG2P16885 1265 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 PLCD1P51178 756 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 PPARAQ07869 468 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 CACTINQ8WUQ7 758 aaKnown RBP9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 GREM2Q9H772 168 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 AXIN2Q9Y2T1 843 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 LDHBP07195 334 aaKnown RBP9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 KIF23Q02241 960 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 KIF5AQ12840 1032 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 MCM6Q14566 821 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 RRP36Q96EU6 259 aaKnown RBP9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 FTOQ9C0B1 505 aaKnown RBP eCLIP9.72□□□□□ -0.853e-6■□□□□ 9.2
HNRNPU-219ENST00000639628 CENPHQ9H3R5 247 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 SERTAD1Q9UHV2 236 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 CTNND2Q9UQB3 1225 aa9.72□□□□□ -0.85
HNRNPU-219ENST00000639628 CEMIPQ8WUJ3 1361 aa9.71□□□□□ -0.85
HNRNPU-219ENST00000639628 SHTN1A0MZ66 631 aa9.71□□□□□ -0.85
HNRNPU-219ENST00000639628 IKBKBO14920 756 aa9.71□□□□□ -0.85
HNRNPU-219ENST00000639628 CYP27B1O15528 508 aa9.71□□□□□ -0.85
HNRNPU-219ENST00000639628 PRDM1O75626 825 aa9.71□□□□□ -0.85
HNRNPU-219ENST00000639628 HLA-DOAP06340 250 aa9.71□□□□□ -0.85
HNRNPU-219ENST00000639628 CTR9Q6PD62 1173 aa9.71□□□□□ -0.85
HNRNPU-219ENST00000639628 PIK3AP1Q6ZUJ8 805 aa9.71□□□□□ -0.85
HNRNPU-219ENST00000639628 FANCBQ8NB91 859 aa9.71□□□□□ -0.85
HNRNPU-219ENST00000639628 CARD6Q9BX69 1037 aa9.71□□□□□ -0.85
HNRNPU-219ENST00000639628 TACC1O75410 805 aa9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 HIBADHP31937 336 aaKnown RBP9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 ADD2P35612 726 aa9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 CCT6AP40227 531 aaKnown RBP9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 SEPT11Q9NVA2 429 aaKnown RBP9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 TMOD2Q9NZR1 351 aa9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 PHKA1P46020 1223 aa9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 ETF1P62495 437 aaKnown RBP9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 PAK1Q13153 545 aa9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 CUL5Q93034 780 aa9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 CCDC42Q96M95 316 aa9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 GUCA1BQ9UMX6 200 aa9.71□□□□□ -0.86
HNRNPU-219ENST00000639628 BTBD18B2RXH4 712 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 DPCR1Q3MIW9 517 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 SARM1Q6SZW1 724 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 TMTC1Q8IUR5 882 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 PUF60Q9UHX1 559 aaKnown RBP9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 ZNF215Q9UL58 517 aaPredicted RBP9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 ZFYVE27Q5T4F4 411 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 KRT79Q5XKE5 535 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 CYP26C1Q6V0L0 522 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 UBA5Q9GZZ9 404 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 VPS54Q9P1Q0 977 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 SALL3Q9BXA9 1300 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 ST5P78524 1137 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 PGBD1Q96JS3 809 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 PUS7LQ9H0K6 701 aaKnown RBP9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 DIP2AQ14689 1571 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 ENOX2Q16206 610 aaKnown RBP9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 RABL6Q3YEC7 729 aaPredicted RBP9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 TRMT44Q8IYL2 757 aaKnown RBP9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 VPS16Q9H269 839 aa9.7□□□□□ -0.86
HNRNPU-219ENST00000639628 RDXP35241 583 aaKnown RBP9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 CLIC6Q96NY7 704 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 FANCLQ9NW38 375 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 TNKSO95271 1327 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 CHMP4BP1P59074 171 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 FCHSD1Q86WN1 690 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 SMARCC2Q8TAQ2 1214 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 CCDC51Q96ER9 411 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 NAPGQ99747 312 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms