RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 AFG3L2Q9Y4W6 797 aa20.04■□□□□ 0.8
COLCA2-206ENST00000638573 PTCH2Q9Y6C5 1203 aa20.04■□□□□ 0.8
COLCA2-206ENST00000638573 POTEFA5A3E0 1075 aa20.03■□□□□ 0.8
COLCA2-206ENST00000638573 GADL1Q6ZQY3 521 aa20.03■□□□□ 0.8
COLCA2-206ENST00000638573 ANKRD23Q86SG2 305 aa20.03■□□□□ 0.8
COLCA2-206ENST00000638573 FLT1P17948 1338 aa20.02■□□□□ 0.8
COLCA2-206ENST00000638573 MYCP01106 439 aaPredicted RBP20.02■□□□□ 0.8
COLCA2-206ENST00000638573 SLFNL1Q499Z3 407 aa20.02■□□□□ 0.8
COLCA2-206ENST00000638573 C17orf99Q6UX52 265 aa20.02■□□□□ 0.8
COLCA2-206ENST00000638573 MAGEB6Q8N7X4 407 aa20.02■□□□□ 0.8
COLCA2-206ENST00000638573 PALD1Q9ULE6 856 aa20.02■□□□□ 0.8
COLCA2-206ENST00000638573 MAST2Q6P0Q8 1798 aa20.02■□□□□ 0.8
COLCA2-206ENST00000638573 A0A0G2JLL6 359 aaPredicted RBP20.01■□□□□ 0.79
COLCA2-206ENST00000638573 CTNND1O60716 968 aaKnown RBP20.01■□□□□ 0.79
COLCA2-206ENST00000638573 RAB11FIP3O75154 756 aa20.01■□□□□ 0.79
COLCA2-206ENST00000638573 NPM3O75607 178 aaKnown RBP20.01■□□□□ 0.79
COLCA2-206ENST00000638573 CENPBP07199 599 aaPredicted RBP20.01■□□□□ 0.79
COLCA2-206ENST00000638573 PPP4CP60510 307 aa20.01■□□□□ 0.79
COLCA2-206ENST00000638573 LACTBP83111 547 aaPredicted RBP20.01■□□□□ 0.79
COLCA2-206ENST00000638573 PRRT2Q7Z6L0 340 aaPredicted RBP20.01■□□□□ 0.79
COLCA2-206ENST00000638573 SIPA1L1O43166 1804 aa20.01■□□□□ 0.79
COLCA2-206ENST00000638573 CXCL11O14625 94 aa20■□□□□ 0.79
COLCA2-206ENST00000638573 CHGBP05060 677 aa20■□□□□ 0.79
COLCA2-206ENST00000638573 EVX2Q03828 476 aa20■□□□□ 0.79
COLCA2-206ENST00000638573 KIF1BPQ96EK5 621 aa20■□□□□ 0.79
COLCA2-206ENST00000638573 NOL10Q9BSC4 688 aaKnown RBP20■□□□□ 0.79
COLCA2-206ENST00000638573 COL2A1P02458 1487 aaPredicted RBP19.99■□□□□ 0.79
COLCA2-206ENST00000638573 SMARCA5O60264 1052 aaPredicted RBP19.99■□□□□ 0.79
COLCA2-206ENST00000638573 TBC1D12O60347 775 aa19.99■□□□□ 0.79
COLCA2-206ENST00000638573 TREML2Q5T2D2 321 aa19.99■□□□□ 0.79
COLCA2-206ENST00000638573 EXOC6Q8TAG9 804 aa19.99■□□□□ 0.79
COLCA2-206ENST00000638573 SH3TC2Q8TF17 1288 aa19.99■□□□□ 0.79
COLCA2-206ENST00000638573 TRIM47Q96LD4 638 aa19.99■□□□□ 0.79
COLCA2-206ENST00000638573 ZCCHC17Q9NP64 241 aaKnown RBP19.99■□□□□ 0.79
COLCA2-206ENST00000638573 PCDHB15Q9Y5E8 787 aa19.99■□□□□ 0.79
COLCA2-206ENST00000638573 DOCK1Q14185 1865 aa19.99■□□□□ 0.79
COLCA2-206ENST00000638573 GDF11O95390 407 aa19.98■□□□□ 0.79
COLCA2-206ENST00000638573 BAG3O95817 575 aa19.98■□□□□ 0.79
COLCA2-206ENST00000638573 CAP2P40123 477 aa19.98■□□□□ 0.79
COLCA2-206ENST00000638573 IRX6P78412 446 aaPredicted RBP19.98■□□□□ 0.79
COLCA2-206ENST00000638573 SPP2Q13103 211 aa19.98■□□□□ 0.79
COLCA2-206ENST00000638573 DNAJC2Q99543 621 aaKnown RBP19.98■□□□□ 0.79
COLCA2-206ENST00000638573 CLASRPQ8N2M8 674 aaKnown RBP19.97■□□□□ 0.79
COLCA2-206ENST00000638573 PHIPQ8WWQ0 1821 aa19.97■□□□□ 0.79
COLCA2-206ENST00000638573 GOLIM4O00461 696 aa19.96■□□□□ 0.79
COLCA2-206ENST00000638573 PEX10O60683 326 aa19.96■□□□□ 0.79
COLCA2-206ENST00000638573 MAP4K4O95819 1239 aaPredicted RBP19.96■□□□□ 0.79
COLCA2-206ENST00000638573 PSMC4P43686 418 aa19.96■□□□□ 0.79
COLCA2-206ENST00000638573 ARMC5Q96C12 935 aa19.96■□□□□ 0.79
COLCA2-206ENST00000638573 IFIT2P09913 472 aaKnown RBP19.95■□□□□ 0.78
COLCA2-206ENST00000638573 BCRP11274 1271 aa19.95■□□□□ 0.78
COLCA2-206ENST00000638573 PLCG2P16885 1265 aa19.95■□□□□ 0.78
COLCA2-206ENST00000638573 HMGCS2P54868 508 aa19.95■□□□□ 0.78
COLCA2-206ENST00000638573 PARK7Q99497 189 aaKnown RBP19.95■□□□□ 0.78
COLCA2-206ENST00000638573 LRRCC1Q9C099 1032 aa19.95■□□□□ 0.78
COLCA2-206ENST00000638573 BOLA2Q9H3K6 86 aa19.95■□□□□ 0.78
COLCA2-206ENST00000638573 PI4KBQ9UBF8 816 aa19.95■□□□□ 0.78
COLCA2-206ENST00000638573 PDE6AP16499 860 aa19.94■□□□□ 0.78
COLCA2-206ENST00000638573 EN2P19622 333 aaPredicted RBP19.94■□□□□ 0.78
COLCA2-206ENST00000638573 OSBPP22059 807 aa19.94■□□□□ 0.78
COLCA2-206ENST00000638573 ZNF333Q96JL9 665 aa19.94■□□□□ 0.78
COLCA2-206ENST00000638573 RIOK1Q9BRS2 568 aaKnown RBP19.94■□□□□ 0.78
COLCA2-206ENST00000638573 DCTPP1Q9H773 170 aa19.94■□□□□ 0.78
COLCA2-206ENST00000638573 CDK5RAP2Q96SN8 1893 aa19.94■□□□□ 0.78
COLCA2-206ENST00000638573 TNRC18O15417 2968 aaPredicted RBP19.94■□□□□ 0.78
COLCA2-206ENST00000638573 USP5P45974 858 aa19.93■□□□□ 0.78
COLCA2-206ENST00000638573 MAP3K12Q12852 859 aa19.93■□□□□ 0.78
COLCA2-206ENST00000638573 SLC9C1Q4G0N8 1177 aa19.93■□□□□ 0.78
COLCA2-206ENST00000638573 FASTKD5Q7L8L6 764 aaKnown RBP19.93■□□□□ 0.78
COLCA2-206ENST00000638573 CRACR2BQ8N4Y2 399 aaPredicted RBP19.93■□□□□ 0.78
COLCA2-206ENST00000638573 ZNF280CQ8ND82 737 aa19.93■□□□□ 0.78
COLCA2-206ENST00000638573 ZBTB47Q9UFB7 747 aaPredicted RBP19.93■□□□□ 0.78
COLCA2-206ENST00000638573 HERC5Q9UII4 1024 aaKnown RBP19.93■□□□□ 0.78
COLCA2-206ENST00000638573 GABRQQ9UN88 632 aa19.93■□□□□ 0.78
COLCA2-206ENST00000638573 AGTPBP1Q9UPW5 1226 aa19.93■□□□□ 0.78
COLCA2-206ENST00000638573 TCRBV5S4A2TA0A5A2 114 aa19.92■□□□□ 0.78
COLCA2-206ENST00000638573 SMIM22K7EJ46 135 aa19.92■□□□□ 0.78
COLCA2-206ENST00000638573 FMNL1O95466 1100 aaPredicted RBP19.92■□□□□ 0.78
COLCA2-206ENST00000638573 HDAC1Q13547 482 aaPredicted RBP19.92■□□□□ 0.78
COLCA2-206ENST00000638573 MTMR2Q13614 643 aa19.92■□□□□ 0.78
COLCA2-206ENST00000638573 KIF22Q14807 665 aa19.92■□□□□ 0.78
COLCA2-206ENST00000638573 SLC9C2Q5TAH2 1124 aa19.92■□□□□ 0.78
COLCA2-206ENST00000638573 TSHZ3Q63HK5 1081 aa19.92■□□□□ 0.78
COLCA2-206ENST00000638573 METTL16Q86W50 562 aaKnown RBP19.92■□□□□ 0.78
COLCA2-206ENST00000638573 DHX36Q9H2U1 1008 aaKnown RBP19.92■□□□□ 0.78
COLCA2-206ENST00000638573 RWDD1Q9H446 243 aaPredicted RBP19.92■□□□□ 0.78
COLCA2-206ENST00000638573 ZNF532Q9HCE3 1301 aa19.92■□□□□ 0.78
COLCA2-206ENST00000638573 PTPRFP10586 1907 aa19.92■□□□□ 0.78
COLCA2-206ENST00000638573 USP17L5A8MUK1 530 aa19.91■□□□□ 0.78
COLCA2-206ENST00000638573 CYP2D6P10635 497 aa19.91■□□□□ 0.78
COLCA2-206ENST00000638573 PLCD1P51178 756 aa19.91■□□□□ 0.78
COLCA2-206ENST00000638573 PRKCZQ05513 592 aa19.91■□□□□ 0.78
COLCA2-206ENST00000638573 LCORLQ8N3X6 602 aa19.91■□□□□ 0.78
COLCA2-206ENST00000638573 ANKRD13CQ8N6S4 541 aa19.91■□□□□ 0.78
COLCA2-206ENST00000638573 SRRDQ9UH36 339 aa19.91■□□□□ 0.78
COLCA2-206ENST00000638573 CENPFP49454 3210 aa19.9■□□□□ 0.78
COLCA2-206ENST00000638573 MTFR1Q15390 333 aa19.9■□□□□ 0.78
COLCA2-206ENST00000638573 SDR42E1Q8WUS8 393 aa19.9■□□□□ 0.78
COLCA2-206ENST00000638573 GCC1Q96CN9 775 aa19.9■□□□□ 0.78
COLCA2-206ENST00000638573 ZBTB21Q9ULJ3 1066 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms