RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 CASS4Q9NQ75 786 aa3.31□□□□□ -1.88
HMHB1-202ENST00000638299 ARHGEF4Q9NR80 690 aa3.31□□□□□ -1.88
HMHB1-202ENST00000638299 IP6K2Q9UHH9 426 aa3.31□□□□□ -1.88
HMHB1-202ENST00000638299 CORINQ9Y5Q5 1042 aa3.31□□□□□ -1.88
HMHB1-202ENST00000638299 SPATA31C2B4DYI2 1134 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 APAF1O14727 1248 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 ABLIM3O94929 683 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 ATE1O95260 518 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 MSX1P28360 303 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 RPIAP49247 311 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 RNF144AP50876 292 aaPredicted RBP3.3□□□□□ -1.88
HMHB1-202ENST00000638299 TMPRSS15P98073 1019 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 SETQ01105 290 aaPredicted RBP3.3□□□□□ -1.88
HMHB1-202ENST00000638299 SFSWAPQ12872 951 aaKnown RBP3.3□□□□□ -1.88
HMHB1-202ENST00000638299 MORC3Q14149 939 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 ZNF460Q14592 562 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 LONRF2Q1L5Z9 754 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 SKOR2Q2VWA4 1001 aaPredicted RBP3.3□□□□□ -1.88
HMHB1-202ENST00000638299 GFOD2Q3B7J2 385 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 TMEM95Q3KNT9 176 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 GRAMD1BQ3KR37 738 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 FAM83BQ5T0W9 1011 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 ACBD5Q5T8D3 534 aaPredicted RBP3.3□□□□□ -1.88
HMHB1-202ENST00000638299 NXNQ6DKJ4 435 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 POTEGQ6S5H5 508 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 ADAMTSL4Q6UY14 1074 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 PRICKLE2Q7Z3G6 844 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 FGD2Q7Z6J4 655 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 NCAPG2Q86XI2 1143 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 IFNL3Q8IZI9 196 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 LRRC47Q8N1G4 583 aaKnown RBP3.3□□□□□ -1.88
HMHB1-202ENST00000638299 CNTD1Q8N815 330 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 CEP120Q8N960 986 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 ANKLE1Q8NAG6 615 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 VPS37AQ8NEZ2 397 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 MYRIPQ8NFW9 859 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 SLC7A14Q8TBB6 771 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 ASAP3Q8TDY4 903 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 PPM1EQ8WY54 764 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 NXPE3Q969Y0 559 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 CHMP4CQ96CF2 233 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 CDC6Q99741 560 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 SENP7Q9BQF6 1050 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 MTA3Q9BTC8 594 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 CBX8Q9HC52 389 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 BRD7Q9NPI1 651 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 DDX20Q9UHI6 824 aaKnown RBP3.3□□□□□ -1.88
HMHB1-202ENST00000638299 USP25Q9UHP3 1055 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 FAM50BQ9Y247 325 aa3.3□□□□□ -1.88
HMHB1-202ENST00000638299 TRBV23-1A0A0A0MS06 115 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 NEMP1O14524 444 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 KPNA6O60684 536 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 ALDH1A1P00352 501 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 IFIT2P09913 472 aaKnown RBP3.29□□□□□ -1.88
HMHB1-202ENST00000638299 ARAFP10398 606 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 TRIM27P14373 513 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 EPB42P16452 691 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 RHOQP17081 205 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 GRIA2P42262 883 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 CTSOP43234 321 aaPredicted RBP3.29□□□□□ -1.88
HMHB1-202ENST00000638299 TRAPPC10P48553 1259 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 NEK4P51957 841 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 POU5F1BQ06416 359 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 GALEQ14376 348 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 HLTFQ14527 1009 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMHB1-202ENST00000638299 ZNF423Q2M1K9 1284 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 ABCB5Q2M3G0 1257 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 RNF219Q5W0B1 726 aaPredicted RBP3.29□□□□□ -1.88
HMHB1-202ENST00000638299 NECAB2Q7Z6G3 386 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 MORC1Q86VD1 984 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 GPATCH11Q8N954 259 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 USP33Q8TEY7 942 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 OTUD5Q96G74 571 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 PNMA5Q96PV4 448 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 SLC9A7Q96T83 725 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 NAP1L4Q99733 375 aaKnown RBP3.29□□□□□ -1.88
HMHB1-202ENST00000638299 TM9SF2Q99805 663 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 BHLHE41Q9C0J9 482 aaPredicted RBP3.29□□□□□ -1.88
HMHB1-202ENST00000638299 TRIM39Q9HCM9 518 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 TMEM39AQ9NV64 488 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 FAM86C1Q9NVL1 165 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 SUCOQ9UBS9 1254 aaKnown RBP3.29□□□□□ -1.88
HMHB1-202ENST00000638299 NRBP1Q9UHY1 535 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 KLF15Q9UIH9 416 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 ZBTB21Q9ULJ3 1066 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 CYP8B1Q9UNU6 501 aa3.29□□□□□ -1.88
HMHB1-202ENST00000638299 TNPO3Q9Y5L0 923 aaKnown RBP3.29□□□□□ -1.88
HMHB1-202ENST00000638299 GPC6Q9Y625 555 aaPredicted RBP3.29□□□□□ -1.88
HMHB1-202ENST00000638299 KAT6BQ8WYB5 2073 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 CCDC163A0A0D9SF12 145 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 BLACEA4D250 179 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 CFAP69A5D8W1 941 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 SLC22A31A6NKX4 558 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 MEIS3P2A8K0S8 358 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 M0R2C6 588 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 NPHP1O15259 732 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 PIP5K1CO60331 668 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 RFPL1O75677 317 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 HTR3BO95264 441 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 CD2BP2O95400 341 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms