RNA–Protein interactions for RNA: ENST00000638283.1

KCNMA1-231, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-231	ENST00000638283	ZKSCAN3	Q9BRR0	538 aa		10.54	□□□□□ -0.72
KCNMA1-231	ENST00000638283	SENP2	Q9HC62	589 aa		10.54	□□□□□ -0.72
KCNMA1-231	ENST00000638283	ZSWIM5	Q9P217	1185 aa		10.54	□□□□□ -0.72
KCNMA1-231	ENST00000638283	DDX60L	Q5H9U9	1706 aa	Known RBP	10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	DHX32	Q7L7V1	743 aa	Known RBP	10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	NCOA7	Q8NI08	942 aa		10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	CNTNAP1	P78357	1384 aa		10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	LAMA4	Q16363	1823 aa		10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	LARGE1	O95461	756 aa		10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	KIF4B	Q2VIQ3	1234 aa		10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	FAM47A	Q5JRC9	791 aa		10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283		Q6ZUG5	572 aa		10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	SNX21	Q969T3	373 aa		10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	TMEM39B	Q9GZU3	492 aa		10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	NAV1	Q8NEY1	1877 aa		10.53	□□□□□ -0.72
KCNMA1-231	ENST00000638283	ST18	O60284	1047 aa		10.52	□□□□□ -0.72
KCNMA1-231	ENST00000638283	NMT2	O60551	498 aa		10.52	□□□□□ -0.72
KCNMA1-231	ENST00000638283	RALYL	Q86SE5	291 aa	Known RBP	10.52	□□□□□ -0.72
KCNMA1-231	ENST00000638283	RTN4	Q9NQC3	1192 aa	Known RBP	10.52	□□□□□ -0.72
KCNMA1-231	ENST00000638283	PRC1	O43663	620 aa		10.52	□□□□□ -0.73
KCNMA1-231	ENST00000638283	FGR	P09769	529 aa		10.52	□□□□□ -0.73
KCNMA1-231	ENST00000638283	DLK2	Q6UY11	383 aa		10.52	□□□□□ -0.73
KCNMA1-231	ENST00000638283	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.52	□□□□□ -0.73
KCNMA1-231	ENST00000638283	DNAJC18	Q9H819	358 aa		10.52	□□□□□ -0.73
KCNMA1-231	ENST00000638283	FOXD4L1	Q9NU39	408 aa		10.52	□□□□□ -0.73
KCNMA1-231	ENST00000638283		H7C1D1	291 aa		10.52	□□□□□ -0.73
KCNMA1-231	ENST00000638283	TRDN	Q13061	729 aa		10.52	□□□□□ -0.73
KCNMA1-231	ENST00000638283	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.52	□□□□□ -0.73
KCNMA1-231	ENST00000638283	BRF1	Q92994	677 aa		10.52	□□□□□ -0.73
KCNMA1-231	ENST00000638283	TPCN1	Q9ULQ1	816 aa		10.52	□□□□□ -0.73
KCNMA1-231	ENST00000638283	FOCAD	Q5VW36	1801 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	RANBP6	O60518	1105 aa	Known RBP	10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	HSCB	Q8IWL3	235 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	HACL1	Q9UJ83	578 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	ECM29	Q5VYK3	1845 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	MCM5	P33992	734 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	CDK8	P49336	464 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	GABPA	Q06546	454 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	PRAMEF18	Q5VWM3	479 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	ROBO3	Q96MS0	1386 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283		K7ELQ4	463 aa	Predicted RBP	10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	APOBR	Q0VD83	1088 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	ANGEL2	Q5VTE6	544 aa	Known RBP	10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	C16orf86	Q6ZW13	317 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	RAB11FIP4	Q86YS3	637 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	TMX3	Q96JJ7	454 aa		10.51	□□□□□ -0.73
KCNMA1-231	ENST00000638283	MYO1B	O43795	1136 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	HMGB1	P09429	215 aa	Known RBP	10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	RNF41	Q9H4P4	317 aa	Predicted RBP	10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	MYH1	P12882	1939 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	LAMB1	P07942	1786 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	GLTPD2	A6NH11	291 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	POTEC	B2RU33	542 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	RASA1	P20936	1047 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	ST3GAL1	Q11201	340 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	RASA3	Q14644	834 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	ME3	Q16798	604 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	DPY19L2	Q6NUT2	758 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	AMOTL1	Q8IY63	956 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	IGDCC4	Q8TDY8	1250 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	CSRNP1	Q96S65	589 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	KRT23	Q9C075	422 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	MKNK2	Q9HBH9	465 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	TMOD2	Q9NZR1	351 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	PGAP2	Q9UHJ9	254 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	SERPINB13	Q9UIV8	391 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	BRPF3	Q9ULD4	1205 aa		10.5	□□□□□ -0.73
KCNMA1-231	ENST00000638283	ORC4	O43929	436 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	ENTPD3	O75355	529 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	PDE4B	Q07343	736 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	STK3	Q13188	491 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	TTC6	Q86TZ1	520 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	NECAB1	Q8N987	351 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	CNNM2	Q9H8M5	875 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	GGA3	Q9NZ52	723 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	NPM3	O75607	178 aa	Known RBP	10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	SHMT1	P34896	483 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	FGD1	P98174	961 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	TFAP4	Q01664	338 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	RRP1B	Q14684	758 aa	Known RBP	10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	MIGA2	Q7L4E1	593 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	FAM151A	Q8WW52	585 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	ESR2	Q92731	530 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	AGXT2	Q9BYV1	514 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	IL17RB	Q9NRM6	502 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	SIPA1L1	O43166	1804 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	ATRNL1	Q5VV63	1379 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	BECN1	Q14457	450 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	CLEC10A	Q8IUN9	316 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	TEPSIN	Q96N21	525 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	LY9	Q9HBG7	655 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	FZD1	Q9UP38	647 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	LIMCH1	Q9UPQ0	1083 aa		10.49	□□□□□ -0.73
KCNMA1-231	ENST00000638283	SH2B2	O14492	632 aa	Predicted RBP	10.48	□□□□□ -0.73
KCNMA1-231	ENST00000638283	SLC3A2	P08195	630 aa	Known RBP	10.48	□□□□□ -0.73
KCNMA1-231	ENST00000638283	RXRA	P19793	462 aa		10.48	□□□□□ -0.73
KCNMA1-231	ENST00000638283	LMOD1	P29536	600 aa	Predicted RBP	10.48	□□□□□ -0.73
KCNMA1-231	ENST00000638283	JAG1	P78504	1218 aa		10.48	□□□□□ -0.73
KCNMA1-231	ENST00000638283	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.48	□□□□□ -0.73

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