RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 TRIM22Q8IYM9 498 aa21.42■■□□□ 1.02
CTSD-212ENST00000637815 TRIM5Q9C035 493 aa21.42■■□□□ 1.02
CTSD-212ENST00000637815 MROH7-TTC4A0A0A0MT08 1334 aa21.42■■□□□ 1.02
CTSD-212ENST00000637815 HIBADHP31937 336 aaKnown RBP21.41■■□□□ 1.02
CTSD-212ENST00000637815 PPP2R5BQ15173 497 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 TMED8Q6PL24 325 aaPredicted RBP21.41■■□□□ 1.02
CTSD-212ENST00000637815 JMYQ8N9B5 988 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 SPTLC3Q9NUV7 552 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 KIAA1468Q9P260 1216 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 GOLGA6L19H0YKK7 550 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 ZNF202O95125 648 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 MMP1P03956 469 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 PFKFB1P16118 471 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 CDC25BP30305 580 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 STK11IPQ8N1F8 1099 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 CRACR2BQ8N4Y2 399 aaPredicted RBP21.41■■□□□ 1.02
CTSD-212ENST00000637815 FANCBQ8NB91 859 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.41■■□□□ 1.02
CTSD-212ENST00000637815 TNKSO95271 1327 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 IRS2Q9Y4H2 1338 aa21.41■■□□□ 1.02
CTSD-212ENST00000637815 FAM237AA0A1B0GTK4 181 aa21.4■■□□□ 1.02
CTSD-212ENST00000637815 DEXIO95424 95 aa21.4■■□□□ 1.02
CTSD-212ENST00000637815 GUCY1A2P33402 732 aa21.4■■□□□ 1.02
CTSD-212ENST00000637815 NOLC1Q14978 699 aaKnown RBP eCLIP21.4■■□□□ 1.021e-8■□□□□ 8.1
CTSD-212ENST00000637815 DHX40Q8IX18 779 aaKnown RBP21.4■■□□□ 1.02
CTSD-212ENST00000637815 CEP57L1Q8IYX8 460 aa21.4■■□□□ 1.02
CTSD-212ENST00000637815 MECOMQ03112 1051 aa21.39■■□□□ 1.02
CTSD-212ENST00000637815 NOSTRINQ8IVI9 506 aa21.39■■□□□ 1.02
CTSD-212ENST00000637815 TIGD1Q96MW7 591 aa21.39■■□□□ 1.02
CTSD-212ENST00000637815 HPSEQ9Y251 543 aa21.39■■□□□ 1.02
CTSD-212ENST00000637815 R3HCC1Q9Y3T6 440 aaKnown RBP21.39■■□□□ 1.02
CTSD-212ENST00000637815 SMIM22K7EJ46 135 aa21.39■■□□□ 1.01
CTSD-212ENST00000637815 MARCKSP29966 332 aaPredicted RBP21.39■■□□□ 1.01
CTSD-212ENST00000637815 KIAA1524Q8TCG1 905 aa21.39■■□□□ 1.01
CTSD-212ENST00000637815 NAT10Q9H0A0 1025 aaKnown RBP21.39■■□□□ 1.01
CTSD-212ENST00000637815 FAM182BQ5T319 152 aa21.38■■□□□ 1.01
CTSD-212ENST00000637815 CTR9Q6PD62 1173 aa21.38■■□□□ 1.01
CTSD-212ENST00000637815 ENAHQ8N8S7 591 aaPredicted RBP21.38■■□□□ 1.01
CTSD-212ENST00000637815 ZSCAN10Q96SZ4 725 aaPredicted RBP21.38■■□□□ 1.01
CTSD-212ENST00000637815 FOXP1Q9H334 677 aaPredicted RBP21.38■■□□□ 1.01
CTSD-212ENST00000637815 SAFBQ15424 915 aaKnown RBP eCLIP21.38■■□□□ 1.01
CTSD-212ENST00000637815 CCDC24Q8N4L8 307 aa21.38■■□□□ 1.01
CTSD-212ENST00000637815 ERCC4Q92889 916 aaPredicted RBP21.38■■□□□ 1.01
CTSD-212ENST00000637815 TFCP2L1Q9NZI6 479 aa21.38■■□□□ 1.01
CTSD-212ENST00000637815 UBR3Q6ZT12 1888 aa21.37■■□□□ 1.01
CTSD-212ENST00000637815 SLC3A2P08195 630 aaKnown RBP21.37■■□□□ 1.01
CTSD-212ENST00000637815 SHC4Q6S5L8 630 aa21.37■■□□□ 1.01
CTSD-212ENST00000637815 BPIFA3Q9BQP9 254 aa21.37■■□□□ 1.01
CTSD-212ENST00000637815 RNF26Q9BY78 433 aaPredicted RBP21.37■■□□□ 1.01
CTSD-212ENST00000637815 A0A087WWV3 80 aa21.36■■□□□ 1.01
CTSD-212ENST00000637815 CYP2D7A0A087X1C5 515 aa21.36■■□□□ 1.01
CTSD-212ENST00000637815 BECN2A8MW95 431 aa21.36■■□□□ 1.01
CTSD-212ENST00000637815 PTGS1P23219 599 aa21.36■■□□□ 1.01
CTSD-212ENST00000637815 RBM6P78332 1123 aaKnown RBP21.36■■□□□ 1.01
CTSD-212ENST00000637815 RESP18Q5W5W9 173 aa21.36■■□□□ 1.01
CTSD-212ENST00000637815 DIS3L2Q8IYB7 885 aaKnown RBP21.36■■□□□ 1.01
CTSD-212ENST00000637815 NUP133Q8WUM0 1156 aa21.36■■□□□ 1.01
CTSD-212ENST00000637815 MRFAP1L1Q96HT8 127 aa21.36■■□□□ 1.01
CTSD-212ENST00000637815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.36■■□□□ 1.01
CTSD-212ENST00000637815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.36■■□□□ 1.01
CTSD-212ENST00000637815 BTBD18B2RXH4 712 aa21.36■■□□□ 1.01
CTSD-212ENST00000637815 CUTAO60888 179 aa21.36■■□□□ 1.01
CTSD-212ENST00000637815 CRNKL1Q9BZJ0 848 aaKnown RBP21.36■■□□□ 1.01
CTSD-212ENST00000637815 PYCARDQ9ULZ3 195 aa21.36■■□□□ 1.01
CTSD-212ENST00000637815 ORC4O43929 436 aa21.35■■□□□ 1.01
CTSD-212ENST00000637815 PRDX5P30044 214 aa21.35■■□□□ 1.01
CTSD-212ENST00000637815 RFC4P35249 363 aa21.35■■□□□ 1.01
CTSD-212ENST00000637815 SYKP43405 635 aa21.35■■□□□ 1.01
CTSD-212ENST00000637815 CCDC186Q7Z3E2 898 aa21.35■■□□□ 1.01
CTSD-212ENST00000637815 IQCA1Q86XH1 822 aa21.35■■□□□ 1.01
CTSD-212ENST00000637815 ATP8A2Q9NTI2 1148 aa21.35■■□□□ 1.01
CTSD-212ENST00000637815 USP17L12C9JPN9 530 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 USP17L21D6R901 530 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 IGSF3O75054 1194 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 TRAPPC3LQ5T215 181 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 TXNRD3Q86VQ6 643 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 DRC7Q8IY82 874 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 CMTR1Q8N1G2 835 aaKnown RBP21.34■■□□□ 1.01
CTSD-212ENST00000637815 GJD4Q96KN9 370 aaPredicted RBP21.34■■□□□ 1.01
CTSD-212ENST00000637815 DCP1AQ9NPI6 582 aaPredicted RBP21.34■■□□□ 1.01
CTSD-212ENST00000637815 CLIP2Q9UDT6 1046 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 KCNJ14Q9UNX9 436 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 TOB1P50616 345 aaPredicted RBP21.34■■□□□ 1.01
CTSD-212ENST00000637815 FUT2Q10981 343 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 DPCR1Q3MIW9 517 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 RILPL1Q5EBL4 403 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 IFIT1BQ5T764 474 aaKnown RBP21.34■■□□□ 1.01
CTSD-212ENST00000637815 C17orf53Q8N3J3 647 aaPredicted RBP21.34■■□□□ 1.01
CTSD-212ENST00000637815 AOPEPQ8N6M6 819 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 AATFQ9NY61 560 aaKnown RBP eCLIP21.34■■□□□ 1.01
CTSD-212ENST00000637815 TAOK2Q9UL54 1235 aa21.34■■□□□ 1.01
CTSD-212ENST00000637815 NLRP12P59046 1061 aa21.33■■□□□ 1.01
CTSD-212ENST00000637815 CHAF1AQ13111 956 aaPredicted RBP21.33■■□□□ 1.01
CTSD-212ENST00000637815 ZRSR1Q15695 479 aaKnown RBP21.33■■□□□ 1.01
CTSD-212ENST00000637815 SBK1Q52WX2 424 aa21.33■■□□□ 1.01
CTSD-212ENST00000637815 CATIPQ7Z7H3 387 aa21.33■■□□□ 1.01
CTSD-212ENST00000637815 CCDC82Q8N4S0 544 aa21.33■■□□□ 1.01
CTSD-212ENST00000637815 NRBP1Q9UHY1 535 aa21.33■■□□□ 1.01
CTSD-212ENST00000637815 CALM1P0DP23 149 aa21.33■■□□□ 1
CTSD-212ENST00000637815 CALM2P0DP24 149 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms