RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 SLC45A1Q9Y2W3 748 aa24.56■■□□□ 1.52
CLN6-222ENST00000637667 CENPFP49454 3210 aa24.55■■□□□ 1.52
CLN6-222ENST00000637667 BCRP11274 1271 aa24.55■■□□□ 1.52
CLN6-222ENST00000637667 PRPF38BQ5VTL8 546 aaKnown RBP24.55■■□□□ 1.52
CLN6-222ENST00000637667 TMEM106CQ9BVX2 250 aa24.55■■□□□ 1.52
CLN6-222ENST00000637667 HERC5Q9UII4 1024 aaKnown RBP24.55■■□□□ 1.52
CLN6-222ENST00000637667 DOCK1Q14185 1865 aa24.54■■□□□ 1.52
CLN6-222ENST00000637667 FMNL1O95466 1100 aaPredicted RBP24.54■■□□□ 1.52
CLN6-222ENST00000637667 AACSQ86V21 672 aa24.54■■□□□ 1.52
CLN6-222ENST00000637667 MAPKAPK5Q8IW41 473 aa24.54■■□□□ 1.52
CLN6-222ENST00000637667 TGFBRAP1Q8WUH2 860 aa24.54■■□□□ 1.52
CLN6-222ENST00000637667 DHX36Q9H2U1 1008 aaKnown RBP24.54■■□□□ 1.52
CLN6-222ENST00000637667 PI4KBQ9UBF8 816 aa24.54■■□□□ 1.52
CLN6-222ENST00000637667 SRRDQ9UH36 339 aa24.54■■□□□ 1.52
CLN6-222ENST00000637667 ZSWIM8A7E2V4 1837 aa24.54■■□□□ 1.52
CLN6-222ENST00000637667 EN2P19622 333 aaPredicted RBP24.53■■□□□ 1.52
CLN6-222ENST00000637667 OSBPP22059 807 aa24.53■■□□□ 1.52
CLN6-222ENST00000637667 HOXD10P28358 340 aa24.53■■□□□ 1.52
CLN6-222ENST00000637667 CAP2P40123 477 aa24.53■■□□□ 1.52
CLN6-222ENST00000637667 RRP1BQ14684 758 aaKnown RBP24.53■■□□□ 1.52
CLN6-222ENST00000637667 HSP90AB4PQ58FF6 505 aa24.53■■□□□ 1.52
CLN6-222ENST00000637667 SH3TC2Q8TF17 1288 aa24.53■■□□□ 1.52
CLN6-222ENST00000637667 FLT1P17948 1338 aa24.53■■□□□ 1.52
CLN6-222ENST00000637667 MAST2Q6P0Q8 1798 aa24.52■■□□□ 1.52
CLN6-222ENST00000637667 IDH1O75874 414 aaKnown RBP24.52■■□□□ 1.52
CLN6-222ENST00000637667 CYP7A1P22680 504 aa24.52■■□□□ 1.52
CLN6-222ENST00000637667 AGTPBP1Q9UPW5 1226 aa24.52■■□□□ 1.52
CLN6-222ENST00000637667 SPP2Q13103 211 aa24.51■■□□□ 1.51
CLN6-222ENST00000637667 SLC4A8Q2Y0W8 1093 aa24.51■■□□□ 1.51
CLN6-222ENST00000637667 ZNF280CQ8ND82 737 aa24.51■■□□□ 1.51
CLN6-222ENST00000637667 TBC1D2Q9BYX2 928 aa24.51■■□□□ 1.51
CLN6-222ENST00000637667 DDX19BQ9UMR2 479 aa24.51■■□□□ 1.51
CLN6-222ENST00000637667 COG6Q9Y2V7 657 aa24.51■■□□□ 1.51
CLN6-222ENST00000637667 MYCP01106 439 aaPredicted RBP24.5■■□□□ 1.51
CLN6-222ENST00000637667 FCGRTP55899 365 aa24.5■■□□□ 1.51
CLN6-222ENST00000637667 DYNLL1P63167 89 aaKnown RBP24.5■■□□□ 1.51
CLN6-222ENST00000637667 RHPN1Q8TCX5 695 aa24.5■■□□□ 1.51
CLN6-222ENST00000637667 SMCR8Q8TEV9 937 aaPredicted RBP24.5■■□□□ 1.51
CLN6-222ENST00000637667 IL1RAPL2Q9NP60 686 aa24.5■■□□□ 1.51
CLN6-222ENST00000637667 NDUFB9Q9Y6M9 179 aa24.5■■□□□ 1.51
CLN6-222ENST00000637667 USP17L5A8MUK1 530 aa24.49■■□□□ 1.51
CLN6-222ENST00000637667 TREML2Q5T2D2 321 aa24.49■■□□□ 1.51
CLN6-222ENST00000637667 FOXP4Q8IVH2 680 aaPredicted RBP24.49■■□□□ 1.51
CLN6-222ENST00000637667 RPAP2Q8IXW5 612 aaPredicted RBP24.49■■□□□ 1.51
CLN6-222ENST00000637667 PROCA1Q8NCQ7 364 aaPredicted RBP24.49■■□□□ 1.51
CLN6-222ENST00000637667 RAET1EQ8TD07 263 aa24.49■■□□□ 1.51
CLN6-222ENST00000637667 ZBTB40Q9NUA8 1239 aa24.49■■□□□ 1.51
CLN6-222ENST00000637667 RCAN3Q9UKA8 241 aa24.49■■□□□ 1.51
CLN6-222ENST00000637667 PALD1Q9ULE6 856 aa24.49■■□□□ 1.51
CLN6-222ENST00000637667 MYPNQ86TC9 1320 aa24.49■■□□□ 1.51
CLN6-222ENST00000637667 RBBP6Q7Z6E9 1792 aaKnown RBP24.49■■□□□ 1.51
CLN6-222ENST00000637667 PHIPQ8WWQ0 1821 aa24.49■■□□□ 1.51
CLN6-222ENST00000637667 HMMRO75330 724 aa24.48■■□□□ 1.51
CLN6-222ENST00000637667 PTPRFP10586 1907 aa24.48■■□□□ 1.51
CLN6-222ENST00000637667 METTL16Q86W50 562 aaKnown RBP24.48■■□□□ 1.51
CLN6-222ENST00000637667 MAGEB6Q8N7X4 407 aa24.48■■□□□ 1.51
CLN6-222ENST00000637667 MIGA1Q8NAN2 632 aa24.48■■□□□ 1.51
CLN6-222ENST00000637667 ANTXR1Q9H6X2 564 aa24.48■■□□□ 1.51
CLN6-222ENST00000637667 DNAJC18Q9H819 358 aa24.48■■□□□ 1.51
CLN6-222ENST00000637667 SAP30BPQ9UHR5 308 aaKnown RBP24.48■■□□□ 1.51
CLN6-222ENST00000637667 HMGCS2P54868 508 aa24.47■■□□□ 1.51
CLN6-222ENST00000637667 MAP3K12Q12852 859 aa24.47■■□□□ 1.51
CLN6-222ENST00000637667 CERS3Q8IU89 383 aa24.47■■□□□ 1.51
CLN6-222ENST00000637667 SIRT2Q8IXJ6 389 aa24.47■■□□□ 1.51
CLN6-222ENST00000637667 CRACR2BQ8N4Y2 399 aaPredicted RBP24.47■■□□□ 1.51
CLN6-222ENST00000637667 KIF1BPQ96EK5 621 aa24.47■■□□□ 1.51
CLN6-222ENST00000637667 TRIM34Q9BYJ4 488 aa24.47■■□□□ 1.51
CLN6-222ENST00000637667 AS3MTQ9HBK9 375 aa24.47■■□□□ 1.51
CLN6-222ENST00000637667 PNMA3Q9UL41 463 aa24.47■■□□□ 1.51
CLN6-222ENST00000637667 APBB1O00213 710 aa24.46■■□□□ 1.51
CLN6-222ENST00000637667 HLA-DOAP06340 250 aa24.46■■□□□ 1.51
CLN6-222ENST00000637667 ASNSP08243 561 aa24.46■■□□□ 1.51
CLN6-222ENST00000637667 GRK4P32298 578 aa24.46■■□□□ 1.51
CLN6-222ENST00000637667 PRKCZQ05513 592 aa24.46■■□□□ 1.51
CLN6-222ENST00000637667 TMED8Q6PL24 325 aaPredicted RBP24.46■■□□□ 1.51
CLN6-222ENST00000637667 CLASRPQ8N2M8 674 aaKnown RBP24.46■■□□□ 1.51
CLN6-222ENST00000637667 MYO5AQ9Y4I1 1855 aaKnown RBP24.46■■□□□ 1.51
CLN6-222ENST00000637667 MKI67P46013 3256 aaKnown RBP24.46■■□□□ 1.51
CLN6-222ENST00000637667 WDR18Q9BV38 432 aa24.45■■□□□ 1.5
CLN6-222ENST00000637667 CHMP4BQ9H444 224 aaKnown RBP24.45■■□□□ 1.5
CLN6-222ENST00000637667 JAG1P78504 1218 aa24.44■■□□□ 1.5
CLN6-222ENST00000637667 PABPC4Q13310 644 aaKnown RBP eCLIP24.44■■□□□ 1.5
CLN6-222ENST00000637667 SH3D19Q5HYK7 790 aa24.44■■□□□ 1.5
CLN6-222ENST00000637667 ANKRD13CQ8N6S4 541 aa24.44■■□□□ 1.5
CLN6-222ENST00000637667 GINM1Q9NU53 330 aa24.44■■□□□ 1.5
CLN6-222ENST00000637667 SIPA1L1O43166 1804 aa24.44■■□□□ 1.5
CLN6-222ENST00000637667 BRCA2P51587 3418 aa24.43■■□□□ 1.5
CLN6-222ENST00000637667 USP5P45974 858 aa24.43■■□□□ 1.5
CLN6-222ENST00000637667 MTFR1Q15390 333 aa24.43■■□□□ 1.5
CLN6-222ENST00000637667 GABRQQ9UN88 632 aa24.43■■□□□ 1.5
CLN6-222ENST00000637667 RAB11FIP3O75154 756 aa24.42■■□□□ 1.5
CLN6-222ENST00000637667 GDF11O95390 407 aa24.42■■□□□ 1.5
CLN6-222ENST00000637667 IFIT2P09913 472 aaKnown RBP24.42■■□□□ 1.5
CLN6-222ENST00000637667 BACE1P56817 501 aa24.42■■□□□ 1.5
CLN6-222ENST00000637667 MTMR2Q13614 643 aa24.42■■□□□ 1.5
CLN6-222ENST00000637667 TTF1Q15361 905 aaPredicted RBP24.42■■□□□ 1.5
CLN6-222ENST00000637667 FAM110CQ1W6H9 321 aa24.42■■□□□ 1.5
CLN6-222ENST00000637667 SHROOM1Q2M3G4 852 aaPredicted RBP24.42■■□□□ 1.5
CLN6-222ENST00000637667 TNPO2O14787 897 aaKnown RBP24.41■■□□□ 1.5
CLN6-222ENST00000637667 GCLCP48506 637 aaPredicted RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms