RNA–Protein interactions for RNA: ENST00000637624.1

PXN-222, Transcript of paxillin, human

TSL 2

Gene PXN, Length 4,132 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PXN-222	ENST00000637624	CCDC178	Q5BJE1	867 aa		13.72	□□□□□ -0.21
PXN-222	ENST00000637624	CEP126	Q9P2H0	1117 aa		13.72	□□□□□ -0.21
PXN-222	ENST00000637624	COL3A1	P02461	1466 aa	Predicted RBP	13.72	□□□□□ -0.21
PXN-222	ENST00000637624	STX10	O60499	249 aa		13.72	□□□□□ -0.21
PXN-222	ENST00000637624	ARHGAP25	P42331	645 aa		13.72	□□□□□ -0.21
PXN-222	ENST00000637624	IQCB1	Q15051	598 aa		13.72	□□□□□ -0.21
PXN-222	ENST00000637624	BRAP	Q7Z569	592 aa		13.72	□□□□□ -0.21
PXN-222	ENST00000637624	WDR24	Q96S15	920 aa		13.72	□□□□□ -0.21
PXN-222	ENST00000637624	BAIAP2L1	Q9UHR4	511 aa		13.72	□□□□□ -0.21
PXN-222	ENST00000637624	CEP83	Q9Y592	693 aa		13.72	□□□□□ -0.21
PXN-222	ENST00000637624	ROBO1	Q9Y6N7	1651 aa		13.72	□□□□□ -0.21
PXN-222	ENST00000637624	KRT9	P35527	623 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	SLC20A2	Q08357	652 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	KIF5A	Q12840	1032 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	KCTD16	Q68DU8	428 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	SSH3	Q8TE77	659 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	LUC7L	Q9NQ29	371 aa	Known RBP	13.71	□□□□□ -0.21
PXN-222	ENST00000637624	ZNF446	Q9NWS9	450 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	ODF2L	Q9ULJ1	636 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	CPD	O75976	1380 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	MAP3K5	Q99683	1374 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	ENC1	O14682	589 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	KCNQ3	O43525	872 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	PRC1	O43663	620 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	CYLC1	P35663	651 aa	Predicted RBP	13.71	□□□□□ -0.21
PXN-222	ENST00000637624	DDB1	Q16531	1140 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	PNMA8A	Q86V59	439 aa	Predicted RBP	13.71	□□□□□ -0.21
PXN-222	ENST00000637624	GPIHBP1	Q8IV16	184 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	N4BP2L2	Q92802	583 aa	Predicted RBP	13.71	□□□□□ -0.21
PXN-222	ENST00000637624	CABS1	Q96KC9	395 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.71	□□□□□ -0.21
PXN-222	ENST00000637624	IL25	Q9H293	177 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	MYO1B	O43795	1136 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	ALS2CR12	Q96Q35	445 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	IRX2	Q9BZI1	471 aa	Predicted RBP	13.71	□□□□□ -0.21
PXN-222	ENST00000637624	GOPC	Q9HD26	462 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	RCOR1	Q9UKL0	485 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	TBC1D2B	Q9UPU7	963 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	CLIC4	Q9Y696	253 aa		13.71	□□□□□ -0.21
PXN-222	ENST00000637624	POLR2D	O15514	142 aa	Known RBP	13.71	□□□□□ -0.22
PXN-222	ENST00000637624	PPFIA1	Q13136	1202 aa		13.71	□□□□□ -0.22
PXN-222	ENST00000637624	MICAL1	Q8TDZ2	1067 aa		13.71	□□□□□ -0.22
PXN-222	ENST00000637624	LLPH	Q9BRT6	129 aa	Known RBP	13.71	□□□□□ -0.22
PXN-222	ENST00000637624	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.71	□□□□□ -0.22
PXN-222	ENST00000637624	KIF4A	O95239	1232 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	BRD2	P25440	801 aa	Known RBP	13.7	□□□□□ -0.22
PXN-222	ENST00000637624	MTIF2	P46199	727 aa	Known RBP	13.7	□□□□□ -0.22
PXN-222	ENST00000637624	UBXN1	Q04323	297 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	SCRN1	Q12765	414 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	MYSM1	Q5VVJ2	828 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	IL17RE	Q8NFR9	667 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	WASF1	Q92558	559 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	FAM169A	Q9Y6X4	670 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	ECM2	O94769	699 aa	Predicted RBP	13.7	□□□□□ -0.22
PXN-222	ENST00000637624	TBC1D8	O95759	1140 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	FBXW10	Q5XX13	1052 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	KANK3	Q6NY19	840 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	UBE3B	Q7Z3V4	1068 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	NAA15	Q9BXJ9	866 aa	Known RBP	13.7	□□□□□ -0.22
PXN-222	ENST00000637624	PPAN	Q9NQ55	473 aa	Known RBP	13.7	□□□□□ -0.22
PXN-222	ENST00000637624	CPSF2	Q9P2I0	782 aa	Known RBP	13.7	□□□□□ -0.22
PXN-222	ENST00000637624	SLC12A7	Q9Y666	1083 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	SSRP1	Q08945	709 aa	Known RBP	13.7	□□□□□ -0.22
PXN-222	ENST00000637624	REST	Q13127	1097 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	CACNA2D4	Q7Z3S7	1137 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	NCOA7	Q8NI08	942 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	CDC5L	Q99459	802 aa	Known RBP	13.7	□□□□□ -0.22
PXN-222	ENST00000637624	SUGCT	Q9HAC7	445 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	MAPK8IP1	Q9UQF2	711 aa		13.7	□□□□□ -0.22
PXN-222	ENST00000637624	LUC7L2	Q9Y383	392 aa	Known RBP	13.7	□□□□□ -0.22
PXN-222	ENST00000637624	GOLGA6L10	A0A0M3HER8	536 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	IFIT3	O14879	490 aa	Known RBP	13.69	□□□□□ -0.22
PXN-222	ENST00000637624	TUBB2A	Q13885	445 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	NEDD9	Q14511	834 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	FMNL3	Q8IVF7	1028 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	TUBB2B	Q9BVA1	445 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	NRK	Q7Z2Y5	1582 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624		E7EVH7	732 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	RNMT	O43148	476 aa	Known RBP	13.69	□□□□□ -0.22
PXN-222	ENST00000637624	MAP4K1	Q92918	833 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	GOLPH3L	Q9H4A5	285 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	GNL3L	Q9NVN8	582 aa	Known RBP	13.69	□□□□□ -0.22
PXN-222	ENST00000637624	SOWAHD	A6NJG2	315 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	TMEM232	C9JQI7	657 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	TRIM47	Q96LD4	638 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	2e-9	■■■■□ 20.5
PXN-222	ENST00000637624	PCDHA5	Q9Y5H7	936 aa		13.69	□□□□□ -0.22
PXN-222	ENST00000637624	CCDC196	A0A1B0GTZ2	297 aa		13.68	□□□□□ -0.22
PXN-222	ENST00000637624	GRM8	O00222	908 aa		13.68	□□□□□ -0.22
PXN-222	ENST00000637624	BUB1B	O60566	1050 aa	Predicted RBP	13.68	□□□□□ -0.22
PXN-222	ENST00000637624	N4BP1	O75113	896 aa	Known RBP	13.68	□□□□□ -0.22
PXN-222	ENST00000637624	TACC1	O75410	805 aa		13.68	□□□□□ -0.22
PXN-222	ENST00000637624	ZNF853	P0CG23	659 aa		13.68	□□□□□ -0.22
PXN-222	ENST00000637624	RNASE9	P60153	205 aa	Known RBP	13.68	□□□□□ -0.22
PXN-222	ENST00000637624	WHAMMP3	Q1A5X7	153 aa		13.68	□□□□□ -0.22
PXN-222	ENST00000637624	DHX40	Q8IX18	779 aa	Known RBP	13.68	□□□□□ -0.22
PXN-222	ENST00000637624	KLHL34	Q8N239	644 aa		13.68	□□□□□ -0.22
PXN-222	ENST00000637624	INCENP	Q9NQS7	918 aa		13.68	□□□□□ -0.22
PXN-222	ENST00000637624	SUFU	Q9UMX1	484 aa		13.68	□□□□□ -0.22
PXN-222	ENST00000637624	KRT83	P78385	493 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms