RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 USH1CQ9Y6N9 552 aa19.45■□□□□ 0.7
CACNA1A-225ENST00000636389 ARHGAP42A6NI28 874 aa19.45■□□□□ 0.7
CACNA1A-225ENST00000636389 TTC30AQ86WT1 665 aa19.45■□□□□ 0.7
CACNA1A-225ENST00000636389 KRT12Q99456 494 aa19.45■□□□□ 0.7
CACNA1A-225ENST00000636389 SUDS3Q9H7L9 328 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-225ENST00000636389 ST7Q9NRC1 585 aa19.45■□□□□ 0.7
CACNA1A-225ENST00000636389 MAPK8IP1Q9UQF2 711 aa19.45■□□□□ 0.7
CACNA1A-225ENST00000636389 NUB1Q9Y5A7 615 aa19.45■□□□□ 0.7
CACNA1A-225ENST00000636389 AFAP1L1Q8TED9 768 aa19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 SUFUQ9UMX1 484 aa19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 CHPF2Q9P2E5 772 aa19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 CD19P15391 556 aa19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 C8orf74Q6P047 294 aa19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 SPDYE1Q8NFV5 336 aaPredicted RBP19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 SORBS3O60504 671 aa19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 ANKRD35Q8N283 1001 aa19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 RYBPQ8N488 228 aaPredicted RBP19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 C9orf84Q5VXU9 1444 aa19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 YARSP54577 528 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 TCIRG1Q13488 830 aa19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 NCAPH2Q6IBW4 605 aa19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 RBM28Q9NW13 759 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-225ENST00000636389 DNM1Q05193 864 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 MMEL1Q495T6 779 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 SYT10Q6XYQ8 523 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 TRIM50Q86XT4 487 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 MRPL44Q9H9J2 332 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 BEND3Q5T5X7 828 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 EYA3Q99504 573 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 TUBB4BP68371 445 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 NOLC1Q14978 699 aaKnown RBP eCLIP19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 DACT1Q9NYF0 836 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 UBAP1LF5GYI3 381 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 P4HA1P13674 534 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 RBM8AQ9Y5S9 174 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 RBM17Q96I25 401 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 SLFN5Q08AF3 891 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 DENND2CQ68D51 928 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 SCYL2Q6P3W7 929 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 CNNM4Q6P4Q7 775 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 MIER3Q7Z3K6 550 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 HDAC11Q96DB2 347 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 ZNF277Q9NRM2 450 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 ANAPC5Q9UJX4 755 aa19.43■□□□□ 0.7
CACNA1A-225ENST00000636389 AKR1B15C9JRZ8 316 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 RAD51AP2Q09MP3 1159 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 SLC12A1Q13621 1099 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 VWA3BQ502W6 1294 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 MYCT1Q8N699 235 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 TPTE2Q6XPS3 522 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 PALM2Q8IXS6 379 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 ERICH3Q5RHP9 1530 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 PALM3A6NDB9 673 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 CPXCR1Q8N123 301 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 VPS16Q9H269 839 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 CCDC68Q9H2F9 335 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 A0A1B0GUA9 196 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 BAG2O95816 211 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 PPP2R3AQ06190 1150 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 PDE4DQ08499 809 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 DBN1Q16643 649 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 TRIM68Q6AZZ1 485 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 CCDC105Q8IYK2 499 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 MAFGO15525 162 aa19.42■□□□□ 0.7
CACNA1A-225ENST00000636389 GPIHBP1Q8IV16 184 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 HELBQ8NG08 1087 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 TBC1D2Q9BYX2 928 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 CTAGE3PQ8IX95 158 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 MMS19Q96T76 1030 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 TNNI1P19237 187 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 XPAP23025 273 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 APOBRQ0VD83 1088 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 PSMB7Q99436 277 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 ABCF3Q9NUQ8 709 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 PHF8Q9UPP1 1060 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 MUM1Q2TAK8 710 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 DZIP3Q86Y13 1208 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 VPS37BQ9H9H4 285 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 IFT20Q8IY31 132 aa19.41■□□□□ 0.7
CACNA1A-225ENST00000636389 S100BP04271 92 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 KRT33BQ14525 404 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 ZCRB1Q8TBF4 217 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 RNF8O76064 485 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 SESTD1Q86VW0 696 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 SMYD2Q9NRG4 433 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 ANKRD20A3Q5VUR7 823 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 BCAP29Q9UHQ4 241 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 PFDN6O15212 129 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 GIGYF1O75420 1035 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 SYF2O95926 243 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 NDUFAB1O14561 156 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 SLC4A1P02730 911 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 BCRP11274 1271 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 IQUBQ8NA54 791 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 UBN1Q9NPG3 1134 aa19.4■□□□□ 0.7
CACNA1A-225ENST00000636389 HAUS3Q68CZ6 603 aa19.39■□□□□ 0.69
CACNA1A-225ENST00000636389 PLCB1Q9NQ66 1216 aa19.39■□□□□ 0.69
CACNA1A-225ENST00000636389 FNDC3AQ9Y2H6 1198 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-225ENST00000636389 SYNJ2BP-COX16A0A087WUM0 186 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms