RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 ZP2Q05996 745 aa5.47□□□□□ -1.53
NPHP3-ACAD11-202ENST00000632629 FMR1Q06787 632 aaKnown RBP eCLIP5.47□□□□□ -1.53
NPHP3-ACAD11-202ENST00000632629 GRM2Q14416 872 aa5.47□□□□□ -1.53
NPHP3-ACAD11-202ENST00000632629 SPRED3Q2MJR0 410 aa5.47□□□□□ -1.53
NPHP3-ACAD11-202ENST00000632629 CIAPIN1Q6FI81 312 aa5.47□□□□□ -1.53
NPHP3-ACAD11-202ENST00000632629 ALG1LQ6GMV1 187 aa5.47□□□□□ -1.53
NPHP3-ACAD11-202ENST00000632629 DBX2Q6ZNG2 339 aa5.47□□□□□ -1.53
NPHP3-ACAD11-202ENST00000632629 TRIM56Q9BRZ2 755 aaKnown RBP5.47□□□□□ -1.53
NPHP3-ACAD11-202ENST00000632629 WDR18Q9BV38 432 aa5.47□□□□□ -1.53
NPHP3-ACAD11-202ENST00000632629 CD320Q9NPF0 282 aa5.47□□□□□ -1.53
NPHP3-ACAD11-202ENST00000632629 SNX11Q9Y5W9 270 aa5.47□□□□□ -1.53
NPHP3-ACAD11-202ENST00000632629 ITIH2P19823 946 aa5.46□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 ATP2B2Q01814 1243 aa5.46□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 IKZF1Q13422 519 aa5.46□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 TMEM67Q5HYA8 995 aa5.46□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 DTHD1Q6ZMT9 781 aa5.46□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 ASB11Q8WXH4 323 aa5.46□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 KIRREL1Q96J84 757 aa5.46□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 DIRC2Q96SL1 478 aa5.46□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 EMILIN2Q9BXX0 1053 aa5.46□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 TNKS2Q9H2K2 1166 aa5.46□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 PNMA6FA0A0J9YX94 578 aa5.45□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 GSTT1P30711 240 aa5.45□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 ATG14Q6ZNE5 492 aa5.45□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 DUSP23Q9BVJ7 150 aa5.45□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 CEP44Q9C0F1 390 aa5.45□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 NSUN3Q9H649 340 aaKnown RBP5.45□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 PIDD1Q9HB75 910 aa5.45□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 TMEM39AQ9NV64 488 aa5.45□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 SAMM50Q9Y512 469 aa5.45□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 IVNS1ABPQ9Y6Y0 642 aa5.45□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 SLFN14P0C7P3 912 aa5.44□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 PDE3AQ14432 1141 aa5.44□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 CYFIP1Q7L576 1253 aa5.44□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 SMYD4Q8IYR2 804 aaPredicted RBP5.44□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 BCO2Q9BYV7 579 aa5.44□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 TMPRSS2O15393 492 aa5.43□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 FOXD2O60548 495 aaPredicted RBP5.43□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 KIF4BQ2VIQ3 1234 aa5.43□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 FANCD2OSQ96PS1 177 aa5.43□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 ATXN3LQ9H3M9 355 aa5.43□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 KCNK12Q9HB15 430 aa5.43□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 SPG7Q9UQ90 795 aa5.43□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 TCAF2A6NFQ2 919 aa5.42□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 GSTP1P09211 210 aaKnown RBP5.42□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 MED14OSP0DP75 135 aa5.42□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 NME2P22392 152 aa5.42□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 FCGRTP55899 365 aa5.42□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 EPS8L3Q8TE67 593 aaKnown RBP5.42□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 PARD6AQ9NPB6 346 aa5.42□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 GPN3Q9UHW5 284 aaPredicted RBP5.42□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 SMG5Q9UPR3 1016 aaKnown RBP5.42□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 ETV2O00321 342 aaPredicted RBP5.41□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 NUAK1O60285 661 aa5.41□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 RNGTTO60942 597 aaKnown RBP5.41□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 ITGAEP38570 1179 aa5.41□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 FAAP100Q0VG06 881 aa5.41□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.41□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 WDR89Q96FK6 387 aaPredicted RBP5.41□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 HEXIM2Q96MH2 286 aaKnown RBP5.41□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 DCP1AQ9NPI6 582 aaPredicted RBP5.41□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 FAM8A1Q9UBU6 413 aa5.41□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 PITPNM2Q9BZ72 1349 aa5.41□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 LIG1P18858 919 aa5.4□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 GLDCP23378 1020 aa5.4□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 ID3Q02535 119 aa5.4□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 SPACA3Q8IXA5 215 aa5.4□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 C3orf58Q8NDZ4 430 aa5.4□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 IRF2BPLQ9H1B7 796 aa5.4□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 DISC1Q9NRI5 854 aa5.4□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 PCOLCE2Q9UKZ9 415 aa5.4□□□□□ -1.54
NPHP3-ACAD11-202ENST00000632629 A0A0G2JLL6 359 aaPredicted RBP5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 HCLS1P14317 486 aaPredicted RBP5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 ARNTP27540 789 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 MAPK8P45983 427 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 LINC00310P59036 64 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 TTLL4Q14679 1199 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 LRRC14Q15048 493 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 PDZD3Q86UT5 571 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 SULF2Q8IWU5 870 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 TOP6BLQ8N6T0 577 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 NECAB3Q96P71 396 aaPredicted RBP5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 C12orf49Q9H741 205 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 C19orf73Q9NVV2 129 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 CACNA2D2Q9NY47 1150 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 PCDHGC5Q9Y5F6 944 aa5.39□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 TRIM37O94972 964 aa5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 ERCC3P19447 782 aa5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 ERVK-24P63145 666 aa5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 ZNF252P-AS1Q0IIN9 211 aa5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 NXPE4Q6UWF7 544 aa5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 SND1Q7KZF4 910 aaKnown RBP eCLIP5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 FAM214BQ7L5A3 538 aa5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 GGNQ86UU5 652 aa5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 KCNN1Q92952 543 aa5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 EPB41L4BQ9H329 900 aa5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 ZCCHC4Q9H5U6 513 aa5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 CCDC86Q9H6F5 360 aaKnown RBP5.38□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 SYN1P17600 705 aa5.37□□□□□ -1.55
NPHP3-ACAD11-202ENST00000632629 BMP7P18075 431 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms