RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 STK36Q9NRP7 1315 aa23.27■■□□□ 1.32
PBX1-222ENST00000627490 GRAPQ13588 217 aa23.27■■□□□ 1.32
PBX1-222ENST00000627490 OTUD7BQ6GQQ9 843 aa23.27■■□□□ 1.32
PBX1-222ENST00000627490 SGMS1Q86VZ5 419 aa23.27■■□□□ 1.32
PBX1-222ENST00000627490 GRAPLQ8TC17 118 aaPredicted RBP23.27■■□□□ 1.32
PBX1-222ENST00000627490 ALG1Q9BT22 464 aa23.27■■□□□ 1.32
PBX1-222ENST00000627490 PFKFB1P16118 471 aa23.26■■□□□ 1.31
PBX1-222ENST00000627490 PPP4R3BQ5MIZ7 849 aa23.26■■□□□ 1.31
PBX1-222ENST00000627490 RPGRQ92834 1020 aaKnown RBP23.26■■□□□ 1.31
PBX1-222ENST00000627490 NBPF3Q9H094 633 aa23.26■■□□□ 1.31
PBX1-222ENST00000627490 NID2Q14112 1375 aa23.25■■□□□ 1.31
PBX1-222ENST00000627490 KIF28PB7ZC32 967 aa23.25■■□□□ 1.31
PBX1-222ENST00000627490 FGFR2P21802 821 aa23.25■■□□□ 1.31
PBX1-222ENST00000627490 PDE6BP35913 854 aa23.25■■□□□ 1.31
PBX1-222ENST00000627490 PUM3Q15397 648 aaKnown RBP23.25■■□□□ 1.31
PBX1-222ENST00000627490 CCAR2Q8N163 923 aaKnown RBP23.25■■□□□ 1.31
PBX1-222ENST00000627490 CRAMP1Q96RY5 1269 aa23.25■■□□□ 1.31
PBX1-222ENST00000627490 CGNQ9P2M7 1197 aaKnown RBP23.25■■□□□ 1.31
PBX1-222ENST00000627490 TUBE1Q9UJT0 475 aa23.25■■□□□ 1.31
PBX1-222ENST00000627490 HPSEQ9Y251 543 aa23.25■■□□□ 1.31
PBX1-222ENST00000627490 LIFRP42702 1097 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 APOA5Q6Q788 366 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 WASF1Q92558 559 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 RBM17Q96I25 401 aaKnown RBP23.24■■□□□ 1.31
PBX1-222ENST00000627490 MTA3Q9BTC8 594 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 COL11A2P13942 1736 aaPredicted RBP23.24■■□□□ 1.31
PBX1-222ENST00000627490 LRRC37AA6NMS7 1700 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 PDE6AP16499 860 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 U2AF2P26368 475 aaKnown RBP eCLIP23.24■■□□□ 1.31
PBX1-222ENST00000627490 CHRNDQ07001 517 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 NCBP1Q09161 790 aaKnown RBP23.24■■□□□ 1.31
PBX1-222ENST00000627490 TRIM29Q14134 588 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 DPCR1Q3MIW9 517 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 KRT40Q6A162 431 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 FILIP1Q7Z7B0 1213 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 NBPF11Q86T75 865 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 TBC1D10CQ8IV04 446 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 LPIN2Q92539 896 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 CNNM2Q9H8M5 875 aa23.24■■□□□ 1.31
PBX1-222ENST00000627490 PIH1D3Q9NQM4 214 aaKnown RBP23.24■■□□□ 1.31
PBX1-222ENST00000627490 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.24■■□□□ 1.31
PBX1-222ENST00000627490 TCRBV5S4A2TA0A5A2 114 aa23.23■■□□□ 1.31
PBX1-222ENST00000627490 ZBTB43O43298 467 aa23.23■■□□□ 1.31
PBX1-222ENST00000627490 CUTAO60888 179 aa23.23■■□□□ 1.31
PBX1-222ENST00000627490 PI16Q6UXB8 463 aa23.23■■□□□ 1.31
PBX1-222ENST00000627490 CYB5R4Q7L1T6 521 aa23.23■■□□□ 1.31
PBX1-222ENST00000627490 PDGFDQ9GZP0 370 aaPredicted RBP23.23■■□□□ 1.31
PBX1-222ENST00000627490 MINPP1Q9UNW1 487 aa23.23■■□□□ 1.31
PBX1-222ENST00000627490 ZNF532Q9HCE3 1301 aa23.22■■□□□ 1.31
PBX1-222ENST00000627490 PSDA5PKW4 1024 aaPredicted RBP23.22■■□□□ 1.31
PBX1-222ENST00000627490 CCP110O43303 1012 aa23.22■■□□□ 1.31
PBX1-222ENST00000627490 CBFA2T2O43439 604 aa23.22■■□□□ 1.31
PBX1-222ENST00000627490 PPFIA3O75145 1194 aa23.22■■□□□ 1.31
PBX1-222ENST00000627490 SYKP43405 635 aa23.22■■□□□ 1.31
PBX1-222ENST00000627490 VPS37DQ86XT2 251 aa23.22■■□□□ 1.31
PBX1-222ENST00000627490 IGDCC4Q8TDY8 1250 aa23.22■■□□□ 1.31
PBX1-222ENST00000627490 STRBPQ96SI9 672 aaKnown RBP23.22■■□□□ 1.31
PBX1-222ENST00000627490 NOL10Q9BSC4 688 aaKnown RBP23.22■■□□□ 1.31
PBX1-222ENST00000627490 TIAM2Q8IVF5 1701 aa23.22■■□□□ 1.31
PBX1-222ENST00000627490 PATL2C9JE40 543 aaKnown RBP23.22■■□□□ 1.31
PBX1-222ENST00000627490 PTPAQ15257 358 aa23.22■■□□□ 1.31
PBX1-222ENST00000627490 CCDC102BQ68D86 513 aa23.22■■□□□ 1.31
PBX1-222ENST00000627490 TMC4Q7Z404 712 aa23.22■■□□□ 1.31
PBX1-222ENST00000627490 KIF13BQ9NQT8 1826 aa23.21■■□□□ 1.31
PBX1-222ENST00000627490 APPP05067 770 aa23.21■■□□□ 1.31
PBX1-222ENST00000627490 IARSP41252 1262 aaKnown RBP23.21■■□□□ 1.31
PBX1-222ENST00000627490 GNL2Q13823 731 aaKnown RBP23.21■■□□□ 1.31
PBX1-222ENST00000627490 RESP18Q5W5W9 173 aa23.21■■□□□ 1.31
PBX1-222ENST00000627490 KIF18AQ8NI77 898 aa23.21■■□□□ 1.31
PBX1-222ENST00000627490 ANKRD2Q9GZV1 360 aa23.21■■□□□ 1.31
PBX1-222ENST00000627490 C10orf71Q711Q0 1435 aa23.21■■□□□ 1.31
PBX1-222ENST00000627490 DOCK2Q92608 1830 aa23.2■■□□□ 1.31
PBX1-222ENST00000627490 IDH1O75874 414 aaKnown RBP23.2■■□□□ 1.3
PBX1-222ENST00000627490 BBOX1O75936 387 aa23.2■■□□□ 1.3
PBX1-222ENST00000627490 SRGNP10124 158 aa23.2■■□□□ 1.3
PBX1-222ENST00000627490 SLC5A1P13866 664 aa23.2■■□□□ 1.3
PBX1-222ENST00000627490 NPR1P16066 1061 aa23.2■■□□□ 1.3
PBX1-222ENST00000627490 UBE4AQ14139 1066 aa23.2■■□□□ 1.3
PBX1-222ENST00000627490 ARID5BQ14865 1188 aa23.2■■□□□ 1.3
PBX1-222ENST00000627490 NCAPHQ15003 741 aa23.2■■□□□ 1.3
PBX1-222ENST00000627490 AIDAQ96BJ3 306 aa23.2■■□□□ 1.3
PBX1-222ENST00000627490 MAP3K14Q99558 947 aa23.2■■□□□ 1.3
PBX1-222ENST00000627490 KRT23Q9C075 422 aa23.2■■□□□ 1.3
PBX1-222ENST00000627490 XPO4Q9C0E2 1151 aaKnown RBP23.2■■□□□ 1.3
PBX1-222ENST00000627490 IFNKQ9P0W0 207 aa23.2■■□□□ 1.3
PBX1-222ENST00000627490 GOLGA8AA7E2F4 631 aa23.19■■□□□ 1.3
PBX1-222ENST00000627490 WDHD1O75717 1129 aaPredicted RBP23.19■■□□□ 1.3
PBX1-222ENST00000627490 GNAT2P19087 354 aa23.19■■□□□ 1.3
PBX1-222ENST00000627490 RCAN1P53805 252 aa23.19■■□□□ 1.3
PBX1-222ENST00000627490 MAP3K12Q12852 859 aa23.19■■□□□ 1.3
PBX1-222ENST00000627490 NTRK3Q16288 839 aa23.19■■□□□ 1.3
PBX1-222ENST00000627490 UTP14CQ5TAP6 766 aaKnown RBP23.19■■□□□ 1.3
PBX1-222ENST00000627490 LY9Q9HBG7 655 aa23.19■■□□□ 1.3
PBX1-222ENST00000627490 HOOK1Q9UJC3 728 aaKnown RBP23.19■■□□□ 1.3
PBX1-222ENST00000627490 ECM29Q5VYK3 1845 aa23.19■■□□□ 1.3
PBX1-222ENST00000627490 DLEC1Q9Y238 1755 aa23.19■■□□□ 1.3
PBX1-222ENST00000627490 SMC2O95347 1197 aa23.19■■□□□ 1.3
PBX1-222ENST00000627490 SFPQP23246 707 aaKnown RBP eCLIP23.19■■□□□ 1.3
PBX1-222ENST00000627490 SSRP1Q08945 709 aaKnown RBP23.19■■□□□ 1.3
PBX1-222ENST00000627490 TMEM67Q5HYA8 995 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms