RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 CD53P19397 219 aa13.57□□□□□ -0.24
LINC00538-201ENST00000626109 ADORA1P30542 326 aa13.57□□□□□ -0.24
LINC00538-201ENST00000626109 USP5P45974 858 aa13.57□□□□□ -0.24
LINC00538-201ENST00000626109 C15orf52Q6ZUT6 534 aaKnown RBP13.57□□□□□ -0.24
LINC00538-201ENST00000626109 GPR101Q96P66 508 aaPredicted RBP13.57□□□□□ -0.24
LINC00538-201ENST00000626109 ZC3H12CQ9C0D7 883 aaKnown RBP13.57□□□□□ -0.24
LINC00538-201ENST00000626109 TLR7Q9NYK1 1049 aaKnown RBP13.57□□□□□ -0.24
LINC00538-201ENST00000626109 DBNLQ9UJU6 430 aaKnown RBP13.57□□□□□ -0.24
LINC00538-201ENST00000626109 ARAP2Q8WZ64 1704 aa13.57□□□□□ -0.24
LINC00538-201ENST00000626109 MX1P20591 662 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 KLRK1P26718 216 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 TERF1P54274 439 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 GPR162Q16538 588 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 WASHC4Q2M389 1173 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 CCDC158Q5M9N0 1113 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 VPS37DQ86XT2 251 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 ZNF513Q8N8E2 541 aaPredicted RBP13.56□□□□□ -0.24
LINC00538-201ENST00000626109 PANK2Q9BZ23 570 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 AOX1Q06278 1338 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC00538-201ENST00000626109 ZNF804AQ7Z570 1209 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 PCGF5Q86SE9 256 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 SCINQ9Y6U3 715 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 LTBP3Q9NS15 1303 aa13.56□□□□□ -0.24
LINC00538-201ENST00000626109 G3V3G9 751 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 NFKBIEO00221 500 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 RIMBP2O15034 1052 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 PPIP5K2O43314 1243 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 RRP9O43818 475 aaKnown RBP13.55□□□□□ -0.24
LINC00538-201ENST00000626109 CYP2E1P05181 493 aaPredicted RBP13.55□□□□□ -0.24
LINC00538-201ENST00000626109 ATP2B1P20020 1258 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 GYG1P46976 350 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 RAD51AP2Q09MP3 1159 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 TTC39AQ5SRH9 613 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 ARHGAP27Q6ZUM4 889 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 MPHOSPH6Q99547 160 aaKnown RBP13.55□□□□□ -0.24
LINC00538-201ENST00000626109 BRINP2Q9C0B6 783 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 VPS33BQ9H267 617 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 STAP2Q9UGK3 403 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 IRS2Q9Y4H2 1338 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 FER1L6Q2WGJ9 1857 aa13.55□□□□□ -0.24
LINC00538-201ENST00000626109 ATG7O95352 703 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 HIBADHP31937 336 aaKnown RBP13.54□□□□□ -0.24
LINC00538-201ENST00000626109 CLCN1P35523 988 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 KIAA2012Q0VF49 1180 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 TTC39BQ5VTQ0 682 aaPredicted RBP13.54□□□□□ -0.24
LINC00538-201ENST00000626109 CCDC102BQ68D86 513 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 PHLDB3Q6NSJ2 640 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 TXNRD3Q86VQ6 643 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 FAM84BQ96KN1 310 aaPredicted RBP13.54□□□□□ -0.24
LINC00538-201ENST00000626109 CEP63Q96MT8 703 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 ESYT1Q9BSJ8 1104 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 PPP1R12CQ9BZL4 782 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 RRAGDQ9NQL2 400 aaPredicted RBP13.54□□□□□ -0.24
LINC00538-201ENST00000626109 ZNF277Q9NRM2 450 aaPredicted RBP13.54□□□□□ -0.24
LINC00538-201ENST00000626109 ECHDC1Q9NTX5 307 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 TTC41PQ6P2S7 1318 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 TRIM6-TRIM34B2RNG4 842 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 UQCRFS1P1P0C7P4 283 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 IARSP41252 1262 aaKnown RBP13.54□□□□□ -0.24
LINC00538-201ENST00000626109 PHKA1P46020 1223 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 BCAMP50895 628 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 RASSF7Q02833 373 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 AOC3Q16853 763 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 MCTP1Q6DN14 999 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 FBXO33Q7Z6M2 555 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 MTMR14Q8NCE2 650 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
LINC00538-201ENST00000626109 TINF2Q9BSI4 451 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 LRRC27Q9C0I9 530 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 SALL3Q9BXA9 1300 aa13.54□□□□□ -0.24
LINC00538-201ENST00000626109 GRIN3BO60391 1043 aa13.53□□□□□ -0.24
LINC00538-201ENST00000626109 PPP1R37O75864 691 aa13.53□□□□□ -0.24
LINC00538-201ENST00000626109 LMOD1P29536 600 aaPredicted RBP13.53□□□□□ -0.24
LINC00538-201ENST00000626109 COA1Q9GZY4 146 aa13.53□□□□□ -0.24
LINC00538-201ENST00000626109 NEK4P51957 841 aa13.52□□□□□ -0.24
LINC00538-201ENST00000626109 CCDC173Q0VFZ6 552 aa13.52□□□□□ -0.24
LINC00538-201ENST00000626109 RILPL2Q969X0 211 aa13.52□□□□□ -0.24
LINC00538-201ENST00000626109 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.25
LINC00538-201ENST00000626109 TSHZ3Q63HK5 1081 aa13.52□□□□□ -0.25
LINC00538-201ENST00000626109 CD209Q9NNX6 404 aa13.52□□□□□ -0.25
LINC00538-201ENST00000626109 U3KPZ7 1027 aaPredicted RBP13.52□□□□□ -0.25
LINC00538-201ENST00000626109 GLRX3O76003 335 aaKnown RBP13.51□□□□□ -0.25
LINC00538-201ENST00000626109 LDHAP00338 332 aaKnown RBP13.51□□□□□ -0.25
LINC00538-201ENST00000626109 FAM200BP0CF97 657 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 ATP5JP18859 108 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 CHMLP26374 656 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 ZNF445P59923 1031 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 DOK7Q18PE1 504 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 NIM1KQ8IY84 436 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC00538-201ENST00000626109 INTS4Q96HW7 963 aaKnown RBP13.51□□□□□ -0.25
LINC00538-201ENST00000626109 DBNDD1Q9H9R9 158 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 ECE2O60344 883 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 VDRP11473 427 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 IL1R1P14778 569 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 NASPP49321 788 aaPredicted RBP13.51□□□□□ -0.25
LINC00538-201ENST00000626109 PODNQ7Z5L7 613 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 GAS2L3Q86XJ1 694 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms