RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CCDC69A6NI79 296 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 SPTLC2O15270 562 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 PCCAP05165 728 aaPredicted RBP14.2□□□□□ -0.14
LITAF-221ENST00000622633 ELF1P32519 619 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 MYSM1Q5VVJ2 828 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 DNAJC10Q8IXB1 793 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 GIMAP7Q8NHV1 300 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 NUP188Q5SRE5 1749 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 CSF1RP07333 972 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 GPTP24298 496 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 TRIM28Q13263 835 aaKnown RBP14.2□□□□□ -0.14
LITAF-221ENST00000622633 DPCR1Q3MIW9 517 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 METTL24Q5JXM2 366 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 LRRC31Q6UY01 552 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 KCNG4Q8TDN1 519 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 CCDC34Q96HJ3 373 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 NAT10Q9H0A0 1025 aaKnown RBP14.2□□□□□ -0.14
LITAF-221ENST00000622633 KIAA1468Q9P260 1216 aa14.2□□□□□ -0.14
LITAF-221ENST00000622633 BIN1O00499 593 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 MCAMP43121 646 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 KIF6Q6ZMV9 814 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 SYNE3Q6ZMZ3 975 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 ZBTB38Q8NAP3 1195 aaPredicted RBP14.19□□□□□ -0.14
LITAF-221ENST00000622633 PAIP2Q9BPZ3 127 aaKnown RBP14.19□□□□□ -0.14
LITAF-221ENST00000622633 A1CFQ9NQ94 594 aaKnown RBP14.19□□□□□ -0.14
LITAF-221ENST00000622633 DCCP43146 1447 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 CCDC96Q2M329 555 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 GBP6Q6ZN66 633 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 TEX11Q8IYF3 940 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 AIFM3Q96NN9 605 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 POLR3EQ9NVU0 708 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 TMOD3Q9NYL9 352 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 MKRN1Q9UHC7 482 aaKnown RBP14.19□□□□□ -0.14
LITAF-221ENST00000622633 ASAP1Q9ULH1 1129 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 RIPOR2Q9Y4F9 1068 aa14.19□□□□□ -0.14
LITAF-221ENST00000622633 H3BQF6 201 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 NEMFO60524 1076 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 YEATS4O95619 227 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 RXRAP19793 462 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 GRIK3Q13003 919 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 HLFQ16534 295 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 LDHAL6AQ6ZMR3 332 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 BRINP3Q76B58 766 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 ZNF483Q8TF39 744 aaPredicted RBP14.18□□□□□ -0.14
LITAF-221ENST00000622633 PLA2G12BQ9BX93 195 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 GREM2Q9H772 168 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 TRMT1Q9NXH9 659 aaKnown RBP14.18□□□□□ -0.14
LITAF-221ENST00000622633 MYH15Q9Y2K3 1946 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 ZNF202O95125 648 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 MARCKSP29966 332 aaPredicted RBP14.18□□□□□ -0.14
LITAF-221ENST00000622633 CCZ1BP86790 482 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 CCZ1P86791 482 aaPredicted RBP14.18□□□□□ -0.14
LITAF-221ENST00000622633 KIF23Q02241 960 aaPredicted RBP14.18□□□□□ -0.14
LITAF-221ENST00000622633 SLC9C2Q5TAH2 1124 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 ANO1Q5XXA6 986 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 BRAPQ7Z569 592 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 FMNL3Q8IVF7 1028 aa14.18□□□□□ -0.14
LITAF-221ENST00000622633 PARP4Q9UKK3 1724 aaKnown RBP14.18□□□□□ -0.14
LITAF-221ENST00000622633 NWD2Q9ULI1 1742 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 SLC3A2P08195 630 aaKnown RBP14.17□□□□□ -0.14
LITAF-221ENST00000622633 ITGA6P23229 1130 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 AP1ARQ63HQ0 302 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 ISM2Q6H9L7 571 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 CYB5R4Q7L1T6 521 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 TBC1D10CQ8IV04 446 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 CCDC26Q8TAB7 109 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 PIK3R5Q8WYR1 880 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 THOC1Q96FV9 657 aaKnown RBP14.17□□□□□ -0.14
LITAF-221ENST00000622633 JPH2Q9BR39 696 aaPredicted RBP14.17□□□□□ -0.14
LITAF-221ENST00000622633 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.17□□□□□ -0.14
LITAF-221ENST00000622633 PIH1D3Q9NQM4 214 aaKnown RBP14.17□□□□□ -0.14
LITAF-221ENST00000622633 TNS2Q63HR2 1409 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 NEDD4P46934 1319 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 WDHD1O75717 1129 aaPredicted RBP14.17□□□□□ -0.14
LITAF-221ENST00000622633 MYBL2P10244 700 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 ADD2P35612 726 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 CCNHP51946 323 aaPredicted RBP14.17□□□□□ -0.14
LITAF-221ENST00000622633 EVA1CP58658 441 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 TEX13AQ9BXU3 409 aaPredicted RBP14.17□□□□□ -0.14
LITAF-221ENST00000622633 CNNM1Q9NRU3 951 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 MCM8Q9UJA3 840 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.17□□□□□ -0.14
LITAF-221ENST00000622633 SPEF2Q9C093 1822 aa14.17□□□□□ -0.14
LITAF-221ENST00000622633 IDH1O75874 414 aaKnown RBP14.16□□□□□ -0.14
LITAF-221ENST00000622633 GCFC2P16383 781 aaKnown RBP14.16□□□□□ -0.14
LITAF-221ENST00000622633 USP8P40818 1118 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 CC2D1AQ6P1N0 951 aaPredicted RBP14.16□□□□□ -0.14
LITAF-221ENST00000622633 TTLL11Q8NHH1 800 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 PIGBQ92521 554 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 ALG1Q9BT22 464 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 VEZTQ9HBM0 779 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 SENP2Q9HC62 589 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 UBR2Q8IWV8 1755 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 ERLIN2O94905 339 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 FAM163BP0C2L3 166 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 PFKFB1P16118 471 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 NEDD9Q14511 834 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 INCENPQ9NQS7 918 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 IFNKQ9P0W0 207 aa14.16□□□□□ -0.14
LITAF-221ENST00000622633 RIC1Q4ADV7 1423 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms