RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 IL1RAPL2Q9NP60 686 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 ZMYM6O95789 1325 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 HMMRO75330 724 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 SLFNL1Q499Z3 407 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 TTC39AQ5SRH9 613 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 C17orf99Q6UX52 265 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 ERO1BQ86YB8 467 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 SLF2Q8IX21 1173 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 FBXW7Q969H0 707 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 EDC3Q96F86 508 aaKnown RBP6.94□□□□□ -1.3
FMR1-217ENST00000620828 C12orf42Q96LP6 360 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.94□□□□□ -1.3
FMR1-217ENST00000620828 SHROOM1Q2M3G4 852 aaPredicted RBP6.94□□□□□ -1.3
FMR1-217ENST00000620828 FAM43AQ8N2R8 423 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 ZKSCAN4Q969J2 545 aaPredicted RBP6.94□□□□□ -1.3
FMR1-217ENST00000620828 HERC5Q9UII4 1024 aaKnown RBP6.94□□□□□ -1.3
FMR1-217ENST00000620828 BCRP11274 1271 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 TTF1Q15361 905 aaPredicted RBP6.93□□□□□ -1.3
FMR1-217ENST00000620828 GCC1Q96CN9 775 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 PAG1Q9NWQ8 432 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 SBK1Q52WX2 424 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 NEUROD6Q96NK8 337 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 DHX36Q9H2U1 1008 aaKnown RBP6.93□□□□□ -1.3
FMR1-217ENST00000620828 SMIM22K7EJ46 135 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 CXCL11O14625 94 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 CAP2P40123 477 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 LBX2Q6XYB7 198 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 LCORLQ8N3X6 602 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 HOOK2Q96ED9 719 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 PDE4AP27815 886 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 KBTBD3Q8NAB2 608 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 PUS7LQ9H0K6 701 aaKnown RBP6.93□□□□□ -1.3
FMR1-217ENST00000620828 EPB41L4AQ9HCS5 686 aaPredicted RBP6.93□□□□□ -1.3
FMR1-217ENST00000620828 TSHZ2Q9NRE2 1034 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 ECHDC1Q9NTX5 307 aa6.93□□□□□ -1.3
FMR1-217ENST00000620828 ZNF532Q9HCE3 1301 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 BTBD19C9JJ37 291 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 LDHCP07864 332 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 SREBF2Q12772 1141 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 GIMAP6Q6P9H5 292 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 STRBPQ96SI9 672 aaKnown RBP6.92□□□□□ -1.3
FMR1-217ENST00000620828 ELP3Q9H9T3 547 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 VEZTQ9HBM0 779 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 DCP1AQ9NPI6 582 aaPredicted RBP6.92□□□□□ -1.3
FMR1-217ENST00000620828 GTF2A2P52657 109 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 NAA16Q6N069 864 aaPredicted RBP6.92□□□□□ -1.3
FMR1-217ENST00000620828 GSG1L2A8MUP6 293 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 PPP1R12BO60237 982 aaPredicted RBP6.92□□□□□ -1.3
FMR1-217ENST00000620828 HOXA7P31268 230 aaPredicted RBP6.92□□□□□ -1.3
FMR1-217ENST00000620828 PLCD1P51178 756 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 ZMYM1Q5SVZ6 1142 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 PLEKHM2Q8IWE5 1019 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 CLASRPQ8N2M8 674 aaKnown RBP6.92□□□□□ -1.3
FMR1-217ENST00000620828 MAGEB6Q8N7X4 407 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 EXOC6Q8TAG9 804 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 OSBP2Q969R2 916 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 ZNF408Q9H9D4 720 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 AATFQ9NY61 560 aaKnown RBP eCLIP6.92□□□□□ -1.3
FMR1-217ENST00000620828 CNMDO75829 334 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 DCAF15Q66K64 600 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 DZIP1Q86YF9 867 aaKnown RBP6.92□□□□□ -1.3
FMR1-217ENST00000620828 NBPF3Q9H094 633 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.92□□□□□ -1.3
FMR1-217ENST00000620828 ADAMTS5Q9UNA0 930 aa6.92□□□□□ -1.3
FMR1-217ENST00000620828 M0R2C6 588 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 PLCG2P16885 1265 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 NF2P35240 595 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 CRHR2Q13324 411 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.91□□□□□ -1.3
FMR1-217ENST00000620828 FOXP4Q8IVH2 680 aaPredicted RBP6.91□□□□□ -1.3
FMR1-217ENST00000620828 ZNF296Q8WUU4 475 aaPredicted RBP6.91□□□□□ -1.3
FMR1-217ENST00000620828 LTBP2Q14767 1821 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 GPR25O00155 361 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 ALDH1A1P00352 501 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 C12orf60Q5U649 245 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 C16orf86Q6ZW13 317 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 USP6NLQ92738 828 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 WRNIP1Q96S55 665 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 PI4KBQ9UBF8 816 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 ANAPC4Q9UJX5 808 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 DOCK3Q8IZD9 2030 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 PROCA1Q8NCQ7 364 aaPredicted RBP6.91□□□□□ -1.3
FMR1-217ENST00000620828 NKX2-3Q8TAU0 364 aa6.91□□□□□ -1.3
FMR1-217ENST00000620828 PDE1AP54750 535 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 KIAA1755Q5JYT7 1200 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 CTR9Q6PD62 1173 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 SLC10A4Q96EP9 437 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.9□□□□□ -1.3
FMR1-217ENST00000620828 MIGA2Q7L4E1 593 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 UBE2Q1Q7Z7E8 422 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 TLR2O60603 784 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 RBM5P52756 815 aaKnown RBP eCLIP6.9□□□□□ -1.3
FMR1-217ENST00000620828 ALX1Q15699 326 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 TEX11Q8IYF3 940 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 EMILIN3Q9NT22 766 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 MORF4L1Q9UBU8 362 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 ABCF2Q9UG63 623 aa6.9□□□□□ -1.3
FMR1-217ENST00000620828 GOLIM4O00461 696 aa6.9□□□□□ -1.31
FMR1-217ENST00000620828 CETPP11597 493 aa6.9□□□□□ -1.31
FMR1-217ENST00000620828 CYP7A1P22680 504 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms