RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 RBM6P78332 1123 aaKnown RBP15.74■□□□□ 0.11
CNOT3-210ENST00000618939 ST5P78524 1137 aa15.74■□□□□ 0.11
CNOT3-210ENST00000618939 PPARAQ07869 468 aa15.74■□□□□ 0.11
CNOT3-210ENST00000618939 MROH1Q8NDA8 1641 aa15.74■□□□□ 0.11
CNOT3-210ENST00000618939 ARHGEF28Q8N1W1 1705 aaKnown RBP15.73■□□□□ 0.11
CNOT3-210ENST00000618939 SYNRGQ9UMZ2 1314 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 GNA11P29992 359 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 MCM6Q14566 821 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 ELF2Q15723 593 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 APOA5Q6Q788 366 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 TRMT44Q8IYL2 757 aaKnown RBP15.73■□□□□ 0.11
CNOT3-210ENST00000618939 SERTAD1Q9UHV2 236 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 LUC7L2Q9Y383 392 aaKnown RBP15.73■□□□□ 0.11
CNOT3-210ENST00000618939 BTBD18B2RXH4 712 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 EVCP57679 992 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 C11orf57Q6ZUT1 292 aaPredicted RBP15.73■□□□□ 0.11
CNOT3-210ENST00000618939 RRP36Q96EU6 259 aaKnown RBP15.73■□□□□ 0.11
CNOT3-210ENST00000618939 POLR3EQ9NVU0 708 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 CTNND2Q9UQB3 1225 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 ADGRB2O60241 1585 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 CUL5Q93034 780 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 AATFQ9NY61 560 aaKnown RBP eCLIP15.73■□□□□ 0.11
CNOT3-210ENST00000618939 TECPR2O15040 1411 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 IGSF3O75054 1194 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 CKAP4Q07065 602 aaKnown RBP15.73■□□□□ 0.11
CNOT3-210ENST00000618939 TCERG1LQ5VWI1 586 aa15.73■□□□□ 0.11
CNOT3-210ENST00000618939 CMTR1Q8N1G2 835 aaKnown RBP15.73■□□□□ 0.11
CNOT3-210ENST00000618939 MED23Q9ULK4 1368 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 USP42Q9H9J4 1324 aaKnown RBP15.72■□□□□ 0.11
CNOT3-210ENST00000618939 PLCG2P16885 1265 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 BCAMP50895 628 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 KRT83P78385 493 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 FERMT2Q96AC1 680 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 PUS7LQ9H0K6 701 aaKnown RBP15.72■□□□□ 0.11
CNOT3-210ENST00000618939 VPS16Q9H269 839 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 PUF60Q9UHX1 559 aaKnown RBP15.72■□□□□ 0.11
CNOT3-210ENST00000618939 ZBTB1Q9Y2K1 713 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 MYO1BO43795 1136 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 SLC39A14Q15043 492 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 FANCBQ8NB91 859 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 LINC00301Q8NCQ3 95 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 GTPBP4Q9BZE4 634 aaKnown RBP15.72■□□□□ 0.11
CNOT3-210ENST00000618939 GUCA1BQ9UMX6 200 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 A0A087WWV3 80 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 BICDL2A1A5D9 508 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 F8W031 263 aaPredicted RBP15.72■□□□□ 0.11
CNOT3-210ENST00000618939 KIAA0754O94854 1291 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 LMAN1P49257 510 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 PICALMQ13492 652 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 CLIC6Q96NY7 704 aa15.72■□□□□ 0.11
CNOT3-210ENST00000618939 GNPATO15228 680 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 KRT86O43790 486 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 ADD2P35612 726 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 MATR3P43243 847 aaKnown RBP eCLIP15.71■□□□□ 0.111e-6■■■■■ 28.9
CNOT3-210ENST00000618939 SLFNL1Q499Z3 407 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 CARD6Q9BX69 1037 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 MMRN2Q9H8L6 949 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 TFCP2L1Q9NZI6 479 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 PXDNLA1KZ92 1463 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 KRT79Q5XKE5 535 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 KRBA2Q6ZNG9 492 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 SMAP1Q8IYB5 467 aaPredicted RBP15.71■□□□□ 0.11
CNOT3-210ENST00000618939 CACTINQ8WUQ7 758 aaKnown RBP15.71■□□□□ 0.11
CNOT3-210ENST00000618939 IL25Q9H293 177 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 MAPK8IP1Q9UQF2 711 aa15.71■□□□□ 0.11
CNOT3-210ENST00000618939 DPCR1Q3MIW9 517 aa15.71■□□□□ 0.1
CNOT3-210ENST00000618939 SDR42E1Q8WUS8 393 aa15.71■□□□□ 0.1
CNOT3-210ENST00000618939 TNKSO95271 1327 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 KIF23Q02241 960 aaPredicted RBP15.7■□□□□ 0.1
CNOT3-210ENST00000618939 LETM2Q2VYF4 491 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 CCDC42Q96M95 316 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 GPHNQ9NQX3 736 aaPredicted RBP15.7■□□□□ 0.1
CNOT3-210ENST00000618939 TMEM131LA2VDJ0 1609 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 TNNI2P48788 182 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 PPP2R3AQ06190 1150 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 KIF5AQ12840 1032 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 SPECC1LQ69YQ0 1117 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 STAMQ92783 540 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 C8orf37Q96NL8 207 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 USP17L12C9JPN9 530 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 USP17L21D6R901 530 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 CDC25BP30305 580 aa15.7■□□□□ 0.1
CNOT3-210ENST00000618939 NLRP10Q86W26 655 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 TICAM2Q86XR7 235 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 DRC1Q96MC2 740 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 GYG1P46976 350 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 PLCD1P51178 756 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 CTR9Q6PD62 1173 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 PARP1P09874 1014 aaKnown RBP15.69■□□□□ 0.1
CNOT3-210ENST00000618939 TUBB4BP68371 445 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 PAK1Q13153 545 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 NAA15Q9BXJ9 866 aaKnown RBP15.69■□□□□ 0.1
CNOT3-210ENST00000618939 WWC3Q9ULE0 1092 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 MAP2P11137 1827 aaKnown RBP15.69■□□□□ 0.1
CNOT3-210ENST00000618939 TACC1O75410 805 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 ZNF827Q17R98 1081 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.69■□□□□ 0.1
CNOT3-210ENST00000618939 PGBD1Q96JS3 809 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 FANCLQ9NW38 375 aa15.69■□□□□ 0.1
CNOT3-210ENST00000618939 TEX11Q8IYF3 940 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms