RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 IFIT1BQ5T764 474 aaKnown RBP23.14■■□□□ 1.3
PCSK6-217ENST00000618548 ABCB6Q9NP58 842 aa23.14■■□□□ 1.3
PCSK6-217ENST00000618548 KRT2P35908 639 aa23.14■■□□□ 1.3
PCSK6-217ENST00000618548 MIGA1Q8NAN2 632 aa23.14■■□□□ 1.3
PCSK6-217ENST00000618548 JAKMIP2Q96AA8 810 aa23.14■■□□□ 1.3
PCSK6-217ENST00000618548 CCDC114Q96M63 670 aa23.14■■□□□ 1.3
PCSK6-217ENST00000618548 hCG_1642624A0A1W2PR95 340 aa23.14■■□□□ 1.29
PCSK6-217ENST00000618548 ZMYND10O75800 440 aa23.14■■□□□ 1.29
PCSK6-217ENST00000618548 GRAMD1CQ8IYS0 662 aa23.14■■□□□ 1.29
PCSK6-217ENST00000618548 BCAS4Q8TDM0 211 aa23.14■■□□□ 1.29
PCSK6-217ENST00000618548 BLZF1Q9H2G9 400 aa23.14■■□□□ 1.29
PCSK6-217ENST00000618548 EXOC1Q9NV70 894 aa23.14■■□□□ 1.29
PCSK6-217ENST00000618548 DYDC1Q8WWB3 177 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 ENC1O14682 589 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 ANKLE2Q86XL3 938 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 C19orf44Q9H6X5 657 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.13■■□□□ 1.29
PCSK6-217ENST00000618548 TADA3O75528 432 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 UQCRFS1P1P0C7P4 283 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 MED4Q9NPJ6 270 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 ARHGEF40Q8TER5 1519 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 E2F4Q16254 413 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 TOGARAM2Q6ZUX3 1019 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 NOSTRINQ8IVI9 506 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 MAGEB6Q8N7X4 407 aa23.13■■□□□ 1.29
PCSK6-217ENST00000618548 CDC5LQ99459 802 aaKnown RBP23.13■■□□□ 1.29
PCSK6-217ENST00000618548 CCT5P48643 541 aa23.12■■□□□ 1.29
PCSK6-217ENST00000618548 CCDC121Q6ZUS5 278 aa23.12■■□□□ 1.29
PCSK6-217ENST00000618548 ANKRD18AQ8IVF6 992 aa23.12■■□□□ 1.29
PCSK6-217ENST00000618548 JRKLQ9Y4A0 524 aa23.12■■□□□ 1.29
PCSK6-217ENST00000618548 TRIM66O15016 1216 aa23.12■■□□□ 1.29
PCSK6-217ENST00000618548 CCDC40Q4G0X9 1142 aa23.12■■□□□ 1.29
PCSK6-217ENST00000618548 FAM89AQ96GI7 184 aa23.12■■□□□ 1.29
PCSK6-217ENST00000618548 DEXIO95424 95 aa23.12■■□□□ 1.29
PCSK6-217ENST00000618548 ASIC1P78348 528 aa23.12■■□□□ 1.29
PCSK6-217ENST00000618548 ARID5AQ03989 594 aa23.12■■□□□ 1.29
PCSK6-217ENST00000618548 MBD4O95243 580 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 FGFR1OPO95684 399 aaKnown RBP23.11■■□□□ 1.29
PCSK6-217ENST00000618548 GBP2P32456 591 aaPredicted RBP23.11■■□□□ 1.29
PCSK6-217ENST00000618548 HPDP32754 393 aaPredicted RBP23.11■■□□□ 1.29
PCSK6-217ENST00000618548 RBL2Q08999 1139 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 WDR24Q96S15 920 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 PAK1Q13153 545 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 CASP8Q14790 479 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 KRT28Q7Z3Y7 464 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 TSG101Q99816 390 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 RNF40O75150 1001 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 RNASE9P60153 205 aaKnown RBP23.11■■□□□ 1.29
PCSK6-217ENST00000618548 TRIM14Q14142 442 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 ZMYM1Q5SVZ6 1142 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 B4GALNT4Q76KP1 1039 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 ACRBPQ8NEB7 543 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 PLBD2Q8NHP8 589 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 DPF2Q92785 391 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 SCLT1Q96NL6 688 aa23.11■■□□□ 1.29
PCSK6-217ENST00000618548 USP5P45974 858 aa23.1■■□□□ 1.29
PCSK6-217ENST00000618548 CYP7A1P22680 504 aa23.1■■□□□ 1.29
PCSK6-217ENST00000618548 CTDSPL2Q05D32 466 aa23.1■■□□□ 1.29
PCSK6-217ENST00000618548 PRPF4BQ13523 1007 aaKnown RBP23.1■■□□□ 1.29
PCSK6-217ENST00000618548 LRRC24Q50LG9 513 aa23.1■■□□□ 1.29
PCSK6-217ENST00000618548 TTC19Q6DKK2 380 aaPredicted RBP23.1■■□□□ 1.29
PCSK6-217ENST00000618548 MAST3O60307 1309 aa23.1■■□□□ 1.29
PCSK6-217ENST00000618548 TSPY2A6NKD2 308 aa23.1■■□□□ 1.29
PCSK6-217ENST00000618548 GNGT1P63211 74 aa23.1■■□□□ 1.29
PCSK6-217ENST00000618548 MKNK2Q9HBH9 465 aa23.1■■□□□ 1.29
PCSK6-217ENST00000618548 MAP2K1Q02750 393 aaPredicted RBP23.09■■□□□ 1.29
PCSK6-217ENST00000618548 ZFYVE27Q5T4F4 411 aa23.09■■□□□ 1.29
PCSK6-217ENST00000618548 V9GY48 417 aaPredicted RBP23.09■■□□□ 1.29
PCSK6-217ENST00000618548 CHGBP05060 677 aa23.09■■□□□ 1.29
PCSK6-217ENST00000618548 KCNA6P17658 529 aa23.09■■□□□ 1.29
PCSK6-217ENST00000618548 SMYD4Q8IYR2 804 aaPredicted RBP23.09■■□□□ 1.29
PCSK6-217ENST00000618548 AMPD3Q01432 767 aa23.09■■□□□ 1.29
PCSK6-217ENST00000618548 SPATA1Q5VX52 437 aa23.09■■□□□ 1.29
PCSK6-217ENST00000618548 POTEDQ86YR6 584 aa23.09■■□□□ 1.29
PCSK6-217ENST00000618548 IRX2Q9BZI1 471 aaPredicted RBP23.09■■□□□ 1.29
PCSK6-217ENST00000618548 TMOD3Q9NYL9 352 aa23.09■■□□□ 1.29
PCSK6-217ENST00000618548 SALL3Q9BXA9 1300 aa23.09■■□□□ 1.29
PCSK6-217ENST00000618548 ATP2B2Q01814 1243 aa23.08■■□□□ 1.29
PCSK6-217ENST00000618548 C8orf74Q6P047 294 aa23.08■■□□□ 1.29
PCSK6-217ENST00000618548 EFCC1Q9HA90 598 aa23.08■■□□□ 1.29
PCSK6-217ENST00000618548 PLCD1P51178 756 aa23.08■■□□□ 1.29
PCSK6-217ENST00000618548 SETBP1Q9Y6X0 1596 aa23.08■■□□□ 1.29
PCSK6-217ENST00000618548 OR8K1Q8NGG5 319 aa23.08■■□□□ 1.28
PCSK6-217ENST00000618548 CCDC51Q96ER9 411 aa23.08■■□□□ 1.28
PCSK6-217ENST00000618548 CAPN7Q9Y6W3 813 aa23.08■■□□□ 1.28
PCSK6-217ENST00000618548 PPFIA1Q13136 1202 aa23.08■■□□□ 1.28
PCSK6-217ENST00000618548 MAN1B1Q9UKM7 699 aa23.08■■□□□ 1.28
PCSK6-217ENST00000618548 G3V3G9 751 aa23.07■■□□□ 1.28
PCSK6-217ENST00000618548 PPP6R2O75170 966 aa23.07■■□□□ 1.28
PCSK6-217ENST00000618548 MAP2K2P36507 400 aa23.07■■□□□ 1.28
PCSK6-217ENST00000618548 DCAF8Q5TAQ9 597 aa23.07■■□□□ 1.28
PCSK6-217ENST00000618548 SMARCC2Q8TAQ2 1214 aa23.07■■□□□ 1.28
PCSK6-217ENST00000618548 EEF2KMTQ96G04 330 aa23.07■■□□□ 1.28
PCSK6-217ENST00000618548 CALML4Q96GE6 196 aa23.07■■□□□ 1.28
PCSK6-217ENST00000618548 EPN1Q9Y6I3 576 aaPredicted RBP23.07■■□□□ 1.28
PCSK6-217ENST00000618548 PTPN12Q05209 780 aaKnown RBP23.07■■□□□ 1.28
PCSK6-217ENST00000618548 VPS54Q9P1Q0 977 aa23.07■■□□□ 1.28
PCSK6-217ENST00000618548 PLA2G4AP47712 749 aa23.07■■□□□ 1.28
PCSK6-217ENST00000618548 ATP1A2P50993 1020 aa23.07■■□□□ 1.28
PCSK6-217ENST00000618548 NELFBQ8WX92 580 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms