RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 PRDM5Q9NQX1 630 aaPredicted RBP13.27□□□□□ -0.29
SRSF3-204ENST00000613941 ATP11BQ9Y2G3 1177 aa13.27□□□□□ -0.29
SRSF3-204ENST00000613941 SUGT1Q9Y2Z0 365 aa13.27□□□□□ -0.29
SRSF3-204ENST00000613941 MROH5Q6ZUA9 1318 aa13.27□□□□□ -0.29
SRSF3-204ENST00000613941 DDTLA6NHG4 134 aaPredicted RBP13.26□□□□□ -0.29
SRSF3-204ENST00000613941 FAM196BA6NMK8 535 aa13.26□□□□□ -0.29
SRSF3-204ENST00000613941 HMGCS2P54868 508 aa13.26□□□□□ -0.29
SRSF3-204ENST00000613941 GRIN2CQ14957 1233 aa13.26□□□□□ -0.29
SRSF3-204ENST00000613941 RALBP1Q15311 655 aa13.26□□□□□ -0.29
SRSF3-204ENST00000613941 METTL24Q5JXM2 366 aa13.26□□□□□ -0.29
SRSF3-204ENST00000613941 BEND3Q5T5X7 828 aa13.26□□□□□ -0.29
SRSF3-204ENST00000613941 PROCA1Q8NCQ7 364 aaPredicted RBP13.26□□□□□ -0.29
SRSF3-204ENST00000613941 ADAMTS19Q8TE59 1207 aa13.26□□□□□ -0.29
SRSF3-204ENST00000613941 BADQ92934 168 aa13.26□□□□□ -0.29
SRSF3-204ENST00000613941 NUDT12Q9BQG2 462 aa13.26□□□□□ -0.29
SRSF3-204ENST00000613941 SMCHD1A6NHR9 2005 aa13.25□□□□□ -0.29
SRSF3-204ENST00000613941 RFX7Q2KHR2 1363 aa13.25□□□□□ -0.29
SRSF3-204ENST00000613941 MYBBP1AQ9BQG0 1328 aaKnown RBP13.25□□□□□ -0.29
SRSF3-204ENST00000613941 GRM8O00222 908 aa13.25□□□□□ -0.29
SRSF3-204ENST00000613941 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
SRSF3-204ENST00000613941 SPP2Q13103 211 aa13.25□□□□□ -0.29
SRSF3-204ENST00000613941 VGLL2Q8N8G2 317 aa13.25□□□□□ -0.29
SRSF3-204ENST00000613941 CTNND1O60716 968 aaKnown RBP13.24□□□□□ -0.29
SRSF3-204ENST00000613941 SOCS4Q8WXH5 440 aa13.24□□□□□ -0.29
SRSF3-204ENST00000613941 SUCLG2Q96I99 432 aa13.24□□□□□ -0.29
SRSF3-204ENST00000613941 TXNRD2Q9NNW7 524 aa13.24□□□□□ -0.29
SRSF3-204ENST00000613941 MORF4L1Q9UBU8 362 aa13.24□□□□□ -0.29
SRSF3-204ENST00000613941 PDE8BO95263 885 aa13.23□□□□□ -0.29
SRSF3-204ENST00000613941 XRCC5P13010 732 aaKnown RBP13.23□□□□□ -0.29
SRSF3-204ENST00000613941 PICALMQ13492 652 aa13.23□□□□□ -0.29
SRSF3-204ENST00000613941 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
SRSF3-204ENST00000613941 UHRF1Q96T88 793 aaPredicted RBP13.23□□□□□ -0.29
SRSF3-204ENST00000613941 DDX4Q9NQI0 724 aaKnown RBP13.23□□□□□ -0.29
SRSF3-204ENST00000613941 ZNFX1Q9P2E3 1918 aaKnown RBP13.23□□□□□ -0.29
SRSF3-204ENST00000613941 ENTPD3O75355 529 aa13.22□□□□□ -0.29
SRSF3-204ENST00000613941 MAP3K10Q02779 954 aa13.22□□□□□ -0.29
SRSF3-204ENST00000613941 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
SRSF3-204ENST00000613941 SH3RF1Q7Z6J0 888 aa13.22□□□□□ -0.29
SRSF3-204ENST00000613941 KLHDC4Q8TBB5 520 aa13.22□□□□□ -0.29
SRSF3-204ENST00000613941 WDR66Q8TBY9 1149 aa13.22□□□□□ -0.29
SRSF3-204ENST00000613941 KAZALD1Q96I82 304 aa13.22□□□□□ -0.29
SRSF3-204ENST00000613941 RNPC3Q96LT9 517 aaKnown RBP13.22□□□□□ -0.29
SRSF3-204ENST00000613941 NECAB3Q96P71 396 aaPredicted RBP13.22□□□□□ -0.29
SRSF3-204ENST00000613941 PORCNQ9H237 461 aa13.22□□□□□ -0.29
SRSF3-204ENST00000613941 C9orf78Q9NZ63 289 aaPredicted RBP13.22□□□□□ -0.29
SRSF3-204ENST00000613941 THEGQ9P2T0 379 aa13.22□□□□□ -0.29
SRSF3-204ENST00000613941 XIRP2A4UGR9 3374 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 FOCADQ5VW36 1801 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
SRSF3-204ENST00000613941 CNGA1P29973 690 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 RGS2P41220 211 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 IRX3P78415 501 aaPredicted RBP13.21□□□□□ -0.29
SRSF3-204ENST00000613941 TRIM60Q495X7 471 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 GJC2Q5T442 439 aaPredicted RBP13.21□□□□□ -0.29
SRSF3-204ENST00000613941 TRMT44Q8IYL2 757 aaKnown RBP13.21□□□□□ -0.29
SRSF3-204ENST00000613941 ZNF280CQ8ND82 737 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 USP6NLQ92738 828 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 ASB2Q96Q27 587 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 APBA2Q99767 749 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 IDI2Q9BXS1 227 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 PDLIM7Q9NR12 457 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 FLRT1Q9NZU1 646 aa13.21□□□□□ -0.29
SRSF3-204ENST00000613941 CHD9Q3L8U1 2897 aa13.21□□□□□ -0.3
SRSF3-204ENST00000613941 DNAJB2P25686 324 aa13.2□□□□□ -0.3
SRSF3-204ENST00000613941 EPHB4P54760 987 aa13.2□□□□□ -0.3
SRSF3-204ENST00000613941 Q3C1V9 767 aa13.2□□□□□ -0.3
SRSF3-204ENST00000613941 MORN1Q5T089 497 aa13.2□□□□□ -0.3
SRSF3-204ENST00000613941 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
SRSF3-204ENST00000613941 GPR142Q7Z601 462 aa13.2□□□□□ -0.3
SRSF3-204ENST00000613941 ATXN2LQ8WWM7 1075 aaKnown RBP13.2□□□□□ -0.3
SRSF3-204ENST00000613941 P2RX7Q99572 595 aaKnown RBP13.2□□□□□ -0.3
SRSF3-204ENST00000613941 PAGR1Q9BTK6 254 aa13.2□□□□□ -0.3
SRSF3-204ENST00000613941 DDX20Q9UHI6 824 aaKnown RBP13.2□□□□□ -0.3
SRSF3-204ENST00000613941 NDUFB9Q9Y6M9 179 aa13.2□□□□□ -0.3
SRSF3-204ENST00000613941 MUC6Q6W4X9 2439 aa13.19□□□□□ -0.3
SRSF3-204ENST00000613941 TRIM43BA6NCK2 446 aa13.19□□□□□ -0.3
SRSF3-204ENST00000613941 DNM1LO00429 736 aa13.19□□□□□ -0.3
SRSF3-204ENST00000613941 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
SRSF3-204ENST00000613941 FGFR2P21802 821 aa13.19□□□□□ -0.3
SRSF3-204ENST00000613941 HERVK_113P62684 666 aa13.19□□□□□ -0.3
SRSF3-204ENST00000613941 RRP1BQ14684 758 aaKnown RBP13.19□□□□□ -0.3
SRSF3-204ENST00000613941 PUM3Q15397 648 aaKnown RBP13.19□□□□□ -0.3
SRSF3-204ENST00000613941 CCDC85BQ15834 202 aaPredicted RBP13.19□□□□□ -0.3
SRSF3-204ENST00000613941 ANO1Q5XXA6 986 aa13.19□□□□□ -0.3
SRSF3-204ENST00000613941 SLC39A5Q6ZMH5 540 aa13.19□□□□□ -0.3
SRSF3-204ENST00000613941 GPRC5AQ8NFJ5 357 aa13.19□□□□□ -0.3
SRSF3-204ENST00000613941 LPAR1Q92633 364 aa13.19□□□□□ -0.3
SRSF3-204ENST00000613941 TRIM43Q96BQ3 446 aaPredicted RBP13.19□□□□□ -0.3
SRSF3-204ENST00000613941 BICC1Q9H694 974 aaKnown RBP13.19□□□□□ -0.3
SRSF3-204ENST00000613941 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.19□□□□□ -0.3
SRSF3-204ENST00000613941 CHD7Q9P2D1 2997 aa13.19□□□□□ -0.3
SRSF3-204ENST00000613941 KIF16BQ96L93 1317 aa13.18□□□□□ -0.3
SRSF3-204ENST00000613941 SYNGAP1Q96PV0 1343 aa13.18□□□□□ -0.3
SRSF3-204ENST00000613941 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
SRSF3-204ENST00000613941 NBPF7P0C2Y1 421 aaPredicted RBP13.18□□□□□ -0.3
SRSF3-204ENST00000613941 ITGB8P26012 769 aa13.18□□□□□ -0.3
SRSF3-204ENST00000613941 MAPK4P31152 587 aa13.18□□□□□ -0.3
SRSF3-204ENST00000613941 ERVK-9P63128 1117 aa13.18□□□□□ -0.3
SRSF3-204ENST00000613941 ERVK-24P63145 666 aa13.18□□□□□ -0.3
SRSF3-204ENST00000613941 MTMR2Q13614 643 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms