RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 FAM196BA6NMK8 535 aa6.04□□□□□ -1.44
SYCP1-209ENST00000613524 FZD9O00144 591 aa6.04□□□□□ -1.44
SYCP1-209ENST00000613524 STAU1O95793 577 aaKnown RBP6.04□□□□□ -1.44
SYCP1-209ENST00000613524 PUM3Q15397 648 aaKnown RBP6.04□□□□□ -1.44
SYCP1-209ENST00000613524 ANKRD45Q5TZF3 282 aa6.04□□□□□ -1.44
SYCP1-209ENST00000613524 CC2D2BQ6DHV5 1058 aa6.04□□□□□ -1.44
SYCP1-209ENST00000613524 CEP85Q6P2H3 762 aa6.04□□□□□ -1.44
SYCP1-209ENST00000613524 ATG9AQ7Z3C6 839 aa6.04□□□□□ -1.44
SYCP1-209ENST00000613524 RBM46Q8TBY0 533 aaKnown RBP6.04□□□□□ -1.44
SYCP1-209ENST00000613524 LNPKQ9C0E8 428 aa6.04□□□□□ -1.44
SYCP1-209ENST00000613524 LRP2BPQ9P2M1 347 aa6.04□□□□□ -1.44
SYCP1-209ENST00000613524 PCDHGA4Q9Y5G9 962 aa6.04□□□□□ -1.44
SYCP1-209ENST00000613524 DNAH12Q6ZR08 3092 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 ZNF831Q5JPB2 1677 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 MYCP01106 439 aaPredicted RBP6.03□□□□□ -1.44
SYCP1-209ENST00000613524 IFIT2P09913 472 aaKnown RBP6.03□□□□□ -1.44
SYCP1-209ENST00000613524 DLGAP5Q15398 846 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 CYP4F22Q6NT55 531 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 DZIP1Q86YF9 867 aaKnown RBP6.03□□□□□ -1.44
SYCP1-209ENST00000613524 SULF1Q8IWU6 871 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 OTUD7AQ8TE49 926 aaPredicted RBP6.03□□□□□ -1.44
SYCP1-209ENST00000613524 DCPSQ96C86 337 aaKnown RBP6.03□□□□□ -1.44
SYCP1-209ENST00000613524 L3MBTL3Q96JM7 780 aaPredicted RBP6.03□□□□□ -1.44
SYCP1-209ENST00000613524 MAP10Q9P2G4 905 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 PNMA3Q9UL41 463 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 DDX19BQ9UMR2 479 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 DDX60Q8IY21 1712 aaKnown RBP6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L15C9J2P7 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L10C9JJH3 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L13C9JLJ4 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L12C9JPN9 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L11C9JVI0 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L21D6R901 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L18D6R9N7 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L22D6RA61 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L17D6RBQ6 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L19D6RCP7 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L20D6RJB6 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 CT47B1P0C2W7 299 aaPredicted RBP6.03□□□□□ -1.44
SYCP1-209ENST00000613524 USP17L24Q0WX57 530 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 DPYDQ12882 1025 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 CCDC102BQ68D86 513 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 DHX38Q92620 1227 aaKnown RBP6.03□□□□□ -1.44
SYCP1-209ENST00000613524 MYOZ2Q9NPC6 264 aa6.03□□□□□ -1.44
SYCP1-209ENST00000613524 LAMB2P55268 1798 aa6.02□□□□□ -1.44
SYCP1-209ENST00000613524 ANKRD36CQ5JPF3 1778 aa6.02□□□□□ -1.44
SYCP1-209ENST00000613524 UBE2Q2LH0YL09 131 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 RNF40O75150 1001 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 RFX5P48382 616 aaPredicted RBP6.02□□□□□ -1.45
SYCP1-209ENST00000613524 CFAP100Q494V2 611 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 SIRT2Q8IXJ6 389 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 PRMT6Q96LA8 375 aaPredicted RBP6.02□□□□□ -1.45
SYCP1-209ENST00000613524 LEMD3Q9Y2U8 911 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 POLR2AP24928 1970 aaKnown RBP6.02□□□□□ -1.45
SYCP1-209ENST00000613524 GOLIM4O00461 696 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 CEP290O15078 2479 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 SBF1O95248 1867 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 IL15P40933 162 aaPredicted RBP6.02□□□□□ -1.45
SYCP1-209ENST00000613524 RASGRF1Q13972 1273 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 AK9Q5TCS8 1911 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 MROH5Q6ZUA9 1318 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 CCDC84Q86UT8 332 aaPredicted RBP6.02□□□□□ -1.45
SYCP1-209ENST00000613524 SMC1BQ8NDV3 1235 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 EAF2Q96CJ1 260 aaPredicted RBP6.02□□□□□ -1.45
SYCP1-209ENST00000613524 ANTXR1Q9H6X2 564 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 TMEM134Q9H6X4 195 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.02□□□□□ -1.45
SYCP1-209ENST00000613524 SAP30BPQ9UHR5 308 aaKnown RBP6.02□□□□□ -1.45
SYCP1-209ENST00000613524 KIAA1551Q9HCM1 1747 aa6.02□□□□□ -1.45
SYCP1-209ENST00000613524 AOC2O75106 756 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 RGS3P49796 1198 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 HUNKP57058 714 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 MTMR2Q13614 643 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 NAA30Q147X3 362 aaPredicted RBP6.01□□□□□ -1.45
SYCP1-209ENST00000613524 PLA2G12BQ9BX93 195 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 TMEM39BQ9GZU3 492 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 COA1Q9GZY4 146 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 ADARB2Q9NS39 739 aaKnown RBP6.01□□□□□ -1.45
SYCP1-209ENST00000613524 SCN9AQ15858 1988 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 BRCA1P38398 1863 aaKnown RBP6.01□□□□□ -1.45
SYCP1-209ENST00000613524 HTTP42858 3142 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 PLCG2P16885 1265 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 ZAP70P43403 619 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 ATP8B2P98198 1209 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 PTK7Q13308 1070 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 RABL6Q3YEC7 729 aaPredicted RBP6.01□□□□□ -1.45
SYCP1-209ENST00000613524 DACT2Q5SW24 774 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 PODNQ7Z5L7 613 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 SREK1Q8WXA9 508 aaKnown RBP6.01□□□□□ -1.45
SYCP1-209ENST00000613524 LPIN2Q92539 896 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 ARHGAP45Q92619 1136 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 AATFQ9NY61 560 aaKnown RBP eCLIP6.01□□□□□ -1.45
SYCP1-209ENST00000613524 HDAC9Q9UKV0 1011 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 ISY1Q9ULR0 285 aaKnown RBP6.01□□□□□ -1.45
SYCP1-209ENST00000613524 COL24A1Q17RW2 1714 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 IBTKQ9P2D0 1353 aaPredicted RBP6.01□□□□□ -1.45
SYCP1-209ENST00000613524 WNT10BO00744 389 aa6.01□□□□□ -1.45
SYCP1-209ENST00000613524 ATMINO43313 823 aaPredicted RBP6.01□□□□□ -1.45
SYCP1-209ENST00000613524 LDHBP07195 334 aaKnown RBP6.01□□□□□ -1.45
SYCP1-209ENST00000613524 HMGB1P09429 215 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms