RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 XRCC5P13010 732 aaKnown RBP12.93□□□□□ -0.34
SSX3-204ENST00000612497 ATN1P54259 1190 aaPredicted RBP12.93□□□□□ -0.34
SSX3-204ENST00000612497 SPP2Q13103 211 aa12.93□□□□□ -0.34
SSX3-204ENST00000612497 C9orf50Q5SZB4 431 aa12.93□□□□□ -0.34
SSX3-204ENST00000612497 LHX8Q68G74 356 aa12.93□□□□□ -0.34
SSX3-204ENST00000612497 TRMT44Q8IYL2 757 aaKnown RBP12.93□□□□□ -0.34
SSX3-204ENST00000612497 VGLL2Q8N8G2 317 aa12.93□□□□□ -0.34
SSX3-204ENST00000612497 SOCS4Q8WXH5 440 aa12.93□□□□□ -0.34
SSX3-204ENST00000612497 MYH2Q9UKX2 1941 aa12.93□□□□□ -0.34
SSX3-204ENST00000612497 LTBP2Q14767 1821 aa12.92□□□□□ -0.34
SSX3-204ENST00000612497 FRMPD3Q5JV73 1810 aa12.92□□□□□ -0.34
SSX3-204ENST00000612497 LOC285556D6RIA3 1793 aa12.92□□□□□ -0.34
SSX3-204ENST00000612497 LDHBP07195 334 aaKnown RBP12.92□□□□□ -0.34
SSX3-204ENST00000612497 PRDX5P30044 214 aa12.92□□□□□ -0.34
SSX3-204ENST00000612497 HMGCS2P54868 508 aa12.92□□□□□ -0.34
SSX3-204ENST00000612497 SMAD3P84022 425 aaKnown RBP12.92□□□□□ -0.34
SSX3-204ENST00000612497 MAP3K10Q02779 954 aa12.92□□□□□ -0.34
SSX3-204ENST00000612497 PDE3AQ14432 1141 aa12.92□□□□□ -0.34
SSX3-204ENST00000612497 SH3BP5LQ7L8J4 393 aa12.92□□□□□ -0.34
SSX3-204ENST00000612497 SUCLG2Q96I99 432 aa12.92□□□□□ -0.34
SSX3-204ENST00000612497 NCOR1O75376 2440 aa12.91□□□□□ -0.34
SSX3-204ENST00000612497 DDTLA6NHG4 134 aaPredicted RBP12.91□□□□□ -0.34
SSX3-204ENST00000612497 DSG3P32926 999 aa12.91□□□□□ -0.34
SSX3-204ENST00000612497 PUM3Q15397 648 aaKnown RBP12.91□□□□□ -0.34
SSX3-204ENST00000612497 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
SSX3-204ENST00000612497 ZNF280CQ8ND82 737 aa12.91□□□□□ -0.34
SSX3-204ENST00000612497 KAZALD1Q96I82 304 aa12.91□□□□□ -0.34
SSX3-204ENST00000612497 IDI2Q9BXS1 227 aa12.91□□□□□ -0.34
SSX3-204ENST00000612497 MORF4L1Q9UBU8 362 aa12.91□□□□□ -0.34
SSX3-204ENST00000612497 KIF16BQ96L93 1317 aa12.9□□□□□ -0.34
SSX3-204ENST00000612497 ALDH1L1O75891 902 aa12.9□□□□□ -0.34
SSX3-204ENST00000612497 RTP1P59025 263 aa12.9□□□□□ -0.34
SSX3-204ENST00000612497 IRX3P78415 501 aaPredicted RBP12.9□□□□□ -0.34
SSX3-204ENST00000612497 PICALMQ13492 652 aa12.9□□□□□ -0.34
SSX3-204ENST00000612497 CCL14Q16627 93 aa12.9□□□□□ -0.34
SSX3-204ENST00000612497 SLC4A10Q6U841 1118 aa12.9□□□□□ -0.34
SSX3-204ENST00000612497 USP38Q8NB14 1042 aa12.9□□□□□ -0.34
SSX3-204ENST00000612497 GPRC5AQ8NFJ5 357 aa12.9□□□□□ -0.34
SSX3-204ENST00000612497 ATP11BQ9Y2G3 1177 aa12.9□□□□□ -0.34
SSX3-204ENST00000612497 ATAD5Q96QE3 1844 aa12.9□□□□□ -0.34
SSX3-204ENST00000612497 MYO9BQ13459 2157 aa12.9□□□□□ -0.34
SSX3-204ENST00000612497 PEX10O60683 326 aa12.89□□□□□ -0.35
SSX3-204ENST00000612497 SLC5A1P13866 664 aa12.89□□□□□ -0.35
SSX3-204ENST00000612497 FGFR2P21802 821 aa12.89□□□□□ -0.35
SSX3-204ENST00000612497 RGS2P41220 211 aa12.89□□□□□ -0.35
SSX3-204ENST00000612497 MAP3K12Q12852 859 aa12.89□□□□□ -0.35
SSX3-204ENST00000612497 BICC1Q9H694 974 aaKnown RBP12.89□□□□□ -0.35
SSX3-204ENST00000612497 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.89□□□□□ -0.35
SSX3-204ENST00000612497 PRDM5Q9NQX1 630 aaPredicted RBP12.89□□□□□ -0.35
SSX3-204ENST00000612497 FAM196BA6NMK8 535 aa12.88□□□□□ -0.35
SSX3-204ENST00000612497 NBPF7P0C2Y1 421 aaPredicted RBP12.88□□□□□ -0.35
SSX3-204ENST00000612497 MAPK4P31152 587 aa12.88□□□□□ -0.35
SSX3-204ENST00000612497 KLHDC4Q8TBB5 520 aa12.88□□□□□ -0.35
SSX3-204ENST00000612497 BADQ92934 168 aa12.88□□□□□ -0.35
SSX3-204ENST00000612497 P2RX7Q99572 595 aaKnown RBP12.88□□□□□ -0.35
SSX3-204ENST00000612497 SRCIN1Q9C0H9 1055 aa12.88□□□□□ -0.35
SSX3-204ENST00000612497 DDX4Q9NQI0 724 aaKnown RBP12.88□□□□□ -0.35
SSX3-204ENST00000612497 TBC1D12O60347 775 aa12.87□□□□□ -0.35
SSX3-204ENST00000612497 VAMP4O75379 141 aa12.87□□□□□ -0.35
SSX3-204ENST00000612497 CNGA1P29973 690 aa12.87□□□□□ -0.35
SSX3-204ENST00000612497 GRIN2CQ14957 1233 aa12.87□□□□□ -0.35
SSX3-204ENST00000612497 MFSD14CQ5VZR4 134 aa12.87□□□□□ -0.35
SSX3-204ENST00000612497 USP6NLQ92738 828 aa12.87□□□□□ -0.35
SSX3-204ENST00000612497 APBA2Q99767 749 aa12.87□□□□□ -0.35
SSX3-204ENST00000612497 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
SSX3-204ENST00000612497 OSBPL5Q9H0X9 879 aaPredicted RBP12.87□□□□□ -0.35
SSX3-204ENST00000612497 CWC22Q9HCG8 908 aaKnown RBP12.87□□□□□ -0.35
SSX3-204ENST00000612497 TXNRD2Q9NNW7 524 aa12.87□□□□□ -0.35
SSX3-204ENST00000612497 GNL3LQ9NVN8 582 aaKnown RBP12.87□□□□□ -0.35
SSX3-204ENST00000612497 RLFQ13129 1914 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 RFX7Q2KHR2 1363 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 USP17L5A8MUK1 530 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 DNM1LO00429 736 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 HERVK_113P62684 666 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 RABL6Q3YEC7 729 aaPredicted RBP12.86□□□□□ -0.35
SSX3-204ENST00000612497 SH3D19Q5HYK7 790 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 MORN1Q5T089 497 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 GPR142Q7Z601 462 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 WWC1Q8IX03 1113 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 ADAMTS19Q8TE59 1207 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 PPM1EQ8WY54 764 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 LPIN2Q92539 896 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 LPAR1Q92633 364 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 PORCNQ9H237 461 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 AS3MTQ9HBK9 375 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 TMOD4Q9NZQ9 345 aa12.86□□□□□ -0.35
SSX3-204ENST00000612497 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
SSX3-204ENST00000612497 MSCO60682 206 aa12.85□□□□□ -0.35
SSX3-204ENST00000612497 MTMR2Q13614 643 aa12.85□□□□□ -0.35
SSX3-204ENST00000612497 Q3C1V9 767 aa12.85□□□□□ -0.35
SSX3-204ENST00000612497 PLEKHH3Q7Z736 793 aa12.85□□□□□ -0.35
SSX3-204ENST00000612497 DZIP1Q86YF9 867 aaKnown RBP12.85□□□□□ -0.35
SSX3-204ENST00000612497 ANKRD44Q8N8A2 993 aa12.85□□□□□ -0.35
SSX3-204ENST00000612497 ATXN2LQ8WWM7 1075 aaKnown RBP12.85□□□□□ -0.35
SSX3-204ENST00000612497 RNPC3Q96LT9 517 aaKnown RBP12.85□□□□□ -0.35
SSX3-204ENST00000612497 PAGR1Q9BTK6 254 aa12.85□□□□□ -0.35
SSX3-204ENST00000612497 RBPJLQ9UBG7 517 aa12.85□□□□□ -0.35
SSX3-204ENST00000612497 GAKO14976 1311 aa12.85□□□□□ -0.35
SSX3-204ENST00000612497 SALL1Q9NSC2 1324 aa12.85□□□□□ -0.35
SSX3-204ENST00000612497 FANCIQ9NVI1 1328 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms