RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.97□□□□□ -0.01
CTSA-210ENST00000606000 MYH7P12883 1935 aa14.96□□□□□ -0.01
CTSA-210ENST00000606000 PTPRAP18433 802 aa14.96□□□□□ -0.01
CTSA-210ENST00000606000 MAP3K12Q12852 859 aa14.96□□□□□ -0.01
CTSA-210ENST00000606000 SHROOM1Q2M3G4 852 aaPredicted RBP14.96□□□□□ -0.01
CTSA-210ENST00000606000 CD99L2Q8TCZ2 262 aa14.96□□□□□ -0.01
CTSA-210ENST00000606000 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.96□□□□□ -0.01
CTSA-210ENST00000606000 DCTPP1Q9H773 170 aa14.96□□□□□ -0.01
CTSA-210ENST00000606000 DNAJC18Q9H819 358 aa14.96□□□□□ -0.01
CTSA-210ENST00000606000 PALD1Q9ULE6 856 aa14.96□□□□□ -0.01
CTSA-210ENST00000606000 KCNH4Q9UQ05 1017 aa14.96□□□□□ -0.01
CTSA-210ENST00000606000 ZHX2Q9Y6X8 837 aa14.96□□□□□ -0.01
CTSA-210ENST00000606000 TBC1D12O60347 775 aa14.95□□□□□ -0.02
CTSA-210ENST00000606000 PDE6AP16499 860 aa14.95□□□□□ -0.02
CTSA-210ENST00000606000 PLCG2P16885 1265 aa14.95□□□□□ -0.02
CTSA-210ENST00000606000 TSHZ3Q63HK5 1081 aa14.95□□□□□ -0.02
CTSA-210ENST00000606000 PICK1Q9NRD5 415 aa14.95□□□□□ -0.02
CTSA-210ENST00000606000 LOC285556D6RIA3 1793 aa14.95□□□□□ -0.02
CTSA-210ENST00000606000 ZNF532Q9HCE3 1301 aa14.94□□□□□ -0.02
CTSA-210ENST00000606000 TCRBV5S4A2TA0A5A2 114 aa14.94□□□□□ -0.02
CTSA-210ENST00000606000 CTNND1O60716 968 aaKnown RBP14.94□□□□□ -0.02
CTSA-210ENST00000606000 ECM2O94769 699 aaPredicted RBP14.94□□□□□ -0.02
CTSA-210ENST00000606000 ATP5JP18859 108 aa14.94□□□□□ -0.02
CTSA-210ENST00000606000 JAG1P78504 1218 aa14.94□□□□□ -0.02
CTSA-210ENST00000606000 TTF1Q15361 905 aaPredicted RBP14.94□□□□□ -0.02
CTSA-210ENST00000606000 SLC9C2Q5TAH2 1124 aa14.94□□□□□ -0.02
CTSA-210ENST00000606000 RIOK1Q9BRS2 568 aaKnown RBP14.94□□□□□ -0.02
CTSA-210ENST00000606000 ZFYVE28Q9HCC9 887 aa14.94□□□□□ -0.02
CTSA-210ENST00000606000 PAG1Q9NWQ8 432 aa14.94□□□□□ -0.02
CTSA-210ENST00000606000 TRIM75PA6NK02 468 aa14.93□□□□□ -0.02
CTSA-210ENST00000606000 PDHXO00330 501 aa14.93□□□□□ -0.02
CTSA-210ENST00000606000 USP5P45974 858 aa14.93□□□□□ -0.02
CTSA-210ENST00000606000 EVX2Q03828 476 aa14.93□□□□□ -0.02
CTSA-210ENST00000606000 GPAT2Q6NUI2 795 aa14.93□□□□□ -0.02
CTSA-210ENST00000606000 OTOP1Q7RTM1 612 aa14.93□□□□□ -0.02
CTSA-210ENST00000606000 HAUS7Q99871 368 aa14.93□□□□□ -0.02
CTSA-210ENST00000606000 HPS5Q9UPZ3 1129 aa14.93□□□□□ -0.02
CTSA-210ENST00000606000 AFG3L2Q9Y4W6 797 aa14.93□□□□□ -0.02
CTSA-210ENST00000606000 TRIM17Q9Y577 477 aa14.93□□□□□ -0.02
CTSA-210ENST00000606000 A0A0G2JLL6 359 aaPredicted RBP14.92□□□□□ -0.02
CTSA-210ENST00000606000 MAGEB6P1A0A0J9YX57 407 aa14.92□□□□□ -0.02
CTSA-210ENST00000606000 IGSF3O75054 1194 aa14.92□□□□□ -0.02
CTSA-210ENST00000606000 CAP2P40123 477 aa14.92□□□□□ -0.02
CTSA-210ENST00000606000 SP3Q02447 781 aa14.92□□□□□ -0.02
CTSA-210ENST00000606000 GADL1Q6ZQY3 521 aa14.92□□□□□ -0.02
CTSA-210ENST00000606000 PRRT2Q7Z6L0 340 aaPredicted RBP14.92□□□□□ -0.02
CTSA-210ENST00000606000 ANKRD23Q86SG2 305 aa14.92□□□□□ -0.02
CTSA-210ENST00000606000 LCORLQ8N3X6 602 aa14.92□□□□□ -0.02
CTSA-210ENST00000606000 ARHGAP39Q9C0H5 1083 aa14.92□□□□□ -0.02
CTSA-210ENST00000606000 PI4KBQ9UBF8 816 aa14.92□□□□□ -0.02
CTSA-210ENST00000606000 HERC5Q9UII4 1024 aaKnown RBP14.92□□□□□ -0.02
CTSA-210ENST00000606000 ADGRA2Q96PE1 1338 aa14.92□□□□□ -0.02
CTSA-210ENST00000606000 CXCL11O14625 94 aa14.91□□□□□ -0.02
CTSA-210ENST00000606000 TLR2O60603 784 aa14.91□□□□□ -0.02
CTSA-210ENST00000606000 GDF11O95390 407 aa14.91□□□□□ -0.02
CTSA-210ENST00000606000 SOX10P56693 466 aa14.91□□□□□ -0.02
CTSA-210ENST00000606000 CRACR2BQ8N4Y2 399 aaPredicted RBP14.91□□□□□ -0.02
CTSA-210ENST00000606000 OTUD7AQ8TE49 926 aaPredicted RBP14.91□□□□□ -0.02
CTSA-210ENST00000606000 ERO1AQ96HE7 468 aa14.91□□□□□ -0.02
CTSA-210ENST00000606000 DHX36Q9H2U1 1008 aaKnown RBP14.91□□□□□ -0.02
CTSA-210ENST00000606000 CPA4Q9UI42 421 aa14.91□□□□□ -0.02
CTSA-210ENST00000606000 CYP2C8P10632 490 aa14.9□□□□□ -0.02
CTSA-210ENST00000606000 ADD2P35612 726 aa14.9□□□□□ -0.02
CTSA-210ENST00000606000 FBXO46Q6PJ61 603 aaPredicted RBP14.9□□□□□ -0.02
CTSA-210ENST00000606000 SDR42E1Q8WUS8 393 aa14.9□□□□□ -0.02
CTSA-210ENST00000606000 ARMT1Q9H993 441 aa14.9□□□□□ -0.02
CTSA-210ENST00000606000 ZCCHC17Q9NP64 241 aaKnown RBP14.9□□□□□ -0.02
CTSA-210ENST00000606000 ECHDC1Q9NTX5 307 aa14.9□□□□□ -0.02
CTSA-210ENST00000606000 BAZ2AQ9UIF9 1905 aaKnown RBP14.9□□□□□ -0.02
CTSA-210ENST00000606000 PRKAB2O43741 272 aa14.89□□□□□ -0.03
CTSA-210ENST00000606000 HLA-DOAP06340 250 aa14.89□□□□□ -0.03
CTSA-210ENST00000606000 CTGFP29279 349 aa14.89□□□□□ -0.03
CTSA-210ENST00000606000 PLCD1P51178 756 aa14.89□□□□□ -0.03
CTSA-210ENST00000606000 SPP2Q13103 211 aa14.89□□□□□ -0.03
CTSA-210ENST00000606000 PKN2Q16513 984 aaKnown RBP14.89□□□□□ -0.03
CTSA-210ENST00000606000 TREML2Q5T2D2 321 aa14.89□□□□□ -0.03
CTSA-210ENST00000606000 METTL16Q86W50 562 aaKnown RBP14.89□□□□□ -0.03
CTSA-210ENST00000606000 TRIM34Q9BYJ4 488 aa14.89□□□□□ -0.03
CTSA-210ENST00000606000 MBD4O95243 580 aa14.88□□□□□ -0.03
CTSA-210ENST00000606000 CYP2D6P10635 497 aa14.88□□□□□ -0.03
CTSA-210ENST00000606000 C17orf99Q6UX52 265 aa14.88□□□□□ -0.03
CTSA-210ENST00000606000 FOXP4Q8IVH2 680 aaPredicted RBP14.88□□□□□ -0.03
CTSA-210ENST00000606000 EFCC1Q9HA90 598 aa14.88□□□□□ -0.03
CTSA-210ENST00000606000 MGAMO43451 1857 aa14.88□□□□□ -0.03
CTSA-210ENST00000606000 USP17L5A8MUK1 530 aa14.87□□□□□ -0.03
CTSA-210ENST00000606000 SMIM22K7EJ46 135 aa14.87□□□□□ -0.03
CTSA-210ENST00000606000 HMGCS2P54868 508 aa14.87□□□□□ -0.03
CTSA-210ENST00000606000 LACTBP83111 547 aaPredicted RBP14.87□□□□□ -0.03
CTSA-210ENST00000606000 TMED8Q6PL24 325 aaPredicted RBP14.87□□□□□ -0.03
CTSA-210ENST00000606000 FASTKD5Q7L8L6 764 aaKnown RBP14.87□□□□□ -0.03
CTSA-210ENST00000606000 CERS3Q8IU89 383 aa14.87□□□□□ -0.03
CTSA-210ENST00000606000 ZNF280CQ8ND82 737 aa14.87□□□□□ -0.03
CTSA-210ENST00000606000 PARK7Q99497 189 aaKnown RBP14.87□□□□□ -0.03
CTSA-210ENST00000606000 CRNKL1Q9BZJ0 848 aaKnown RBP14.87□□□□□ -0.03
CTSA-210ENST00000606000 ZBTB21Q9ULJ3 1066 aa14.87□□□□□ -0.03
CTSA-210ENST00000606000 PTPN22Q9Y2R2 807 aa14.87□□□□□ -0.03
CTSA-210ENST00000606000 MTMR2Q13614 643 aa14.86□□□□□ -0.03
CTSA-210ENST00000606000 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.86□□□□□ -0.03
CTSA-210ENST00000606000 PUS7LQ9H0K6 701 aaKnown RBP14.86□□□□□ -0.03
CTSA-210ENST00000606000 DCP1AQ9NPI6 582 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms