RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	CCDC138	Q96M89	665 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ZNF142	P52746	1687 aa	Predicted RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	NOP56	O00567	594 aa	Known RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	GNGT2	O14610	69 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RLBP1	P12271	317 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	EEF1D	P29692	281 aa	Known RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	FLOT2	Q14254	428 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	C16orf87	Q6PH81	154 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	STXBP4	Q6ZWJ1	553 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PPHLN1	Q8NEY8	458 aa	Known RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	STAG1	Q8WVM7	1258 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TRIM47	Q96LD4	638 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	JAKMIP1	Q96N16	626 aa	Known RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	APLF	Q8IW19	511 aa	Predicted RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	EVI5L	Q96CN4	794 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	KRT82	Q9NSB4	513 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CCDC194	A0A1B0GVG4	234 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	BRD2	P25440	801 aa	Known RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	MCM7	P33993	719 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	KRT9	P35527	623 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	UBE3A	Q05086	875 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	NCBP1	Q09161	790 aa	Known RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SRGAP1	Q7Z6B7	1085 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	UBE2Q2	Q8WVN8	375 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RPGR	Q92834	1020 aa	Known RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	MTRF1L	Q9UGC7	380 aa	Known RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	AMOTL2	Q9Y2J4	779 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	IQANK1	A0A1B0GTG1	560 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CEP104	O60308	925 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ADCY5	O95622	1261 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	AMPD3	Q01432	767 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RILPL1	Q5EBL4	403 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	BLM	P54132	1417 aa	Predicted RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PLEKHG3	A1L390	1219 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	INPP5B	P32019	993 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	VAV2	P52735	878 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	MMEL1	Q495T6	779 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CCDC93	Q567U6	631 aa		4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TRMT10C	Q7L0Y3	403 aa	Known RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	LEO1	Q8WVC0	666 aa	Predicted RBP	4.55	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ORC4	O43929	436 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ATP5D	P30049	168 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RASSF2	P50749	326 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	GSDMD	P57764	484 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PLS1	Q14651	629 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PDRG1	Q9NUG6	133 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TRAK1	Q9UPV9	953 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624		K7ELQ4	463 aa	Predicted RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SKI	P12755	728 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	MGARP	Q8TDB4	240 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CCDC124	Q96CT7	223 aa	Known RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	DACH2	Q96NX9	599 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	HELLS	Q9NRZ9	838 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RAB11FIP3	O75154	756 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	POLR3D	P05423	398 aa	Predicted RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	KRT15	P19012	456 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	KCNA1	Q09470	495 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ANKRD20A3	Q5VUR7	823 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	BSPRY	Q5W0U4	402 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	HOMEZ	Q8IX15	550 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	IQSEC2	Q5JU85	1478 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CLTC	Q00610	1675 aa	Known RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	DIAPH2	O60879	1101 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PIP4K2B	P78356	416 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CWF19L2	Q2TBE0	894 aa	Known RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	FAM71B	Q8TC56	605 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	API5	Q9BZZ5	524 aa	Known RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624		Q9H521	79 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	METTL14	Q9HCE5	456 aa	Known RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	VAT1L	Q9HCJ6	419 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	OCRL	Q01968	901 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	BICDL1	Q6ZP65	573 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TEX9	Q8N6V9	391 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	GUCA1B	Q9UMX6	200 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RP1	P56715	2156 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ARHGEF9	O43307	516 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RANBP6	O60518	1105 aa	Known RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	BAG4	O95429	457 aa	Known RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SLC12A2	P55011	1212 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	MRPS15	P82914	257 aa	Known RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PDCL	Q13371	301 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SLC12A1	Q13621	1099 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	BTN2A1	Q7KYR7	527 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SPDYE1	Q8NFV5	336 aa	Predicted RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	C8orf76	Q96K31	380 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	N4BP3	O15049	544 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PPFIA4	O75335	1185 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ANGPT1	Q15389	498 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ZSCAN25	Q6NSZ9	544 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PLEKHM3	Q6ZWE6	761 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	KIAA2013	Q8IYS2	634 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ZBTB24	O43167	697 aa	Predicted RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TRPA1	O75762	1119 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TRIM37	O94972	964 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RAPGEF3	O95398	923 aa		4.54	□□□□□ -1.68

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