RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 FAM160A1Q05DH4 1040 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 MAP7Q14244 749 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 PRSS36Q5K4E3 855 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 RNF43Q68DV7 783 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 BNC2Q6ZN30 1099 aaPredicted RBP5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 CYFIP1Q7L576 1253 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 HDXQ7Z353 690 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 SLC51AQ86UW1 340 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 SMYD4Q8IYR2 804 aaPredicted RBP5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 PLPPR2Q96GM1 343 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 WDR97A6NE52 1622 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 FAM221AA4D161 298 aa5.97□□□□□ -1.45
CKS1BP3-201ENST00000600888 GFRA2O00451 464 aa5.97□□□□□ -1.45
CKS1BP3-201ENST00000600888 FANCGO15287 622 aa5.97□□□□□ -1.45
CKS1BP3-201ENST00000600888 IGLV1-40P01703 118 aa5.97□□□□□ -1.45
CKS1BP3-201ENST00000600888 NEFMP07197 916 aa5.97□□□□□ -1.45
CKS1BP3-201ENST00000600888 HCLS1P14317 486 aaPredicted RBP5.97□□□□□ -1.45
CKS1BP3-201ENST00000600888 GARTP22102 1010 aa5.97□□□□□ -1.45
CKS1BP3-201ENST00000600888 NFIAQ12857 509 aa5.97□□□□□ -1.45
CKS1BP3-201ENST00000600888 RNF34Q969K3 372 aa5.97□□□□□ -1.45
CKS1BP3-201ENST00000600888 PCOLCE2Q9UKZ9 415 aa5.97□□□□□ -1.45
CKS1BP3-201ENST00000600888 DAGLAQ9Y4D2 1042 aa5.97□□□□□ -1.45
CKS1BP3-201ENST00000600888 GSC2O15499 205 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 DYNC1LI2O43237 492 aaPredicted RBP5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 F13A1P00488 732 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 NTF4P34130 210 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 EIF4A3P38919 411 aaKnown RBP5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 RBM25P49756 843 aaKnown RBP5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 RPL6Q02878 288 aaKnown RBP5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 WIPI1Q5MNZ9 446 aaPredicted RBP5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 SNAP47Q5SQN1 464 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 ZBTB37Q5TC79 503 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 DIEXFQ68CQ4 756 aaKnown RBP5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 FBXL19Q6PCT2 694 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 SEZ6L2Q6UXD5 910 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 GOLM1Q8NBJ4 401 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 GATAD2BQ8WXI9 593 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 ISL2Q96A47 359 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 LGR6Q9HBX8 967 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 SSU72Q9NP77 194 aaKnown RBP5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 KCNQ5Q9NR82 932 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 PICK1Q9NRD5 415 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 C1GALT1Q9NS00 363 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 PRKAG2Q9UGJ0 569 aa5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 EIF4G3O43432 1585 aaKnown RBP5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 POLA1P09884 1462 aaPredicted RBP5.96□□□□□ -1.46
CKS1BP3-201ENST00000600888 ZNF608Q9ULD9 1512 aaPredicted RBP5.95□□□□□ -1.46
CKS1BP3-201ENST00000600888 PRAMEF27A3QJZ7 478 aa5.95□□□□□ -1.46
CKS1BP3-201ENST00000600888 GREM1O60565 184 aa5.95□□□□□ -1.46
CKS1BP3-201ENST00000600888 CILPO75339 1184 aa5.95□□□□□ -1.46
CKS1BP3-201ENST00000600888 METTL16Q86W50 562 aaKnown RBP5.95□□□□□ -1.46
CKS1BP3-201ENST00000600888 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.95□□□□□ -1.46
CKS1BP3-201ENST00000600888 ZNF296Q8WUU4 475 aaPredicted RBP5.95□□□□□ -1.46
CKS1BP3-201ENST00000600888 DBNDD2Q9BQY9 259 aa5.95□□□□□ -1.46
CKS1BP3-201ENST00000600888 WNT10AQ9GZT5 417 aa5.95□□□□□ -1.46
CKS1BP3-201ENST00000600888 ADAMTS1Q9UHI8 967 aa5.95□□□□□ -1.46
CKS1BP3-201ENST00000600888 TACC3Q9Y6A5 838 aa5.95□□□□□ -1.46
CKS1BP3-201ENST00000600888 ADMP35318 185 aa5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 HDLBPQ00341 1268 aaKnown RBP5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 FAM196AQ6ZSG2 479 aa5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 CDC37L1Q7L3B6 337 aa5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 USP48Q86UV5 1035 aa5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 SHISA5Q8N114 240 aa5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 FBXL6Q8N531 539 aa5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 ZNF507Q8TCN5 953 aa5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 MFSD14AQ96MC6 490 aa5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 TBC1D32Q96NH3 1257 aa5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 SUPT16HQ9Y5B9 1047 aaKnown RBP5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 CUX1P39880 1505 aa5.94□□□□□ -1.46
CKS1BP3-201ENST00000600888 WDR64B1ANS9 1081 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 BPNT1O95861 308 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 F13BP05160 661 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 ETF1P62495 437 aaKnown RBP5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 RACK1P63244 317 aaKnown RBP5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 ZNF394Q53GI3 561 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 C9orf131Q5VYM1 1079 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 UBE3DQ7Z6J8 389 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 ZAR1Q86SH2 424 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 KCT2Q8NC54 265 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 SHKBP1Q8TBC3 707 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 GATA6Q92908 595 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 DDX41Q9UJV9 622 aaKnown RBP5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 PCDHGB7Q9Y5F8 929 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 CHD1O14646 1710 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 ROBO2Q9HCK4 1378 aa5.93□□□□□ -1.46
CKS1BP3-201ENST00000600888 BIVM-ERCC5R4GMW8 1640 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 SOGA1O94964 1423 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 FGD5Q6ZNL6 1462 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 GRK4P32298 578 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 CDK5R2Q13319 367 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 MPP2Q14168 576 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 NT5DC4Q86YG4 428 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 ZDHHC13Q8IUH4 622 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 GIMAP7Q8NHV1 300 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 FBXO27Q8NI29 283 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 PSMG3-AS1Q96PY0 264 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 SPON2Q9BUD6 331 aa5.92□□□□□ -1.46
CKS1BP3-201ENST00000600888 FAM170BA6NMN3 283 aa5.91□□□□□ -1.46
CKS1BP3-201ENST00000600888 E9PSI1 815 aa5.91□□□□□ -1.46
CKS1BP3-201ENST00000600888 TLR3O15455 904 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms