RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 SUGT1Q9Y2Z0 365 aa6.18□□□□□ -1.42
LINC01539-206ENST00000593282 JUNBP17275 347 aaPredicted RBP6.17□□□□□ -1.42
LINC01539-206ENST00000593282 HSD3B2P26439 372 aa6.17□□□□□ -1.42
LINC01539-206ENST00000593282 CCDC181Q5TID7 509 aa6.17□□□□□ -1.42
LINC01539-206ENST00000593282 JAZF1Q86VZ6 243 aa6.17□□□□□ -1.42
LINC01539-206ENST00000593282 OSBPL7Q9BZF2 842 aa6.17□□□□□ -1.42
LINC01539-206ENST00000593282 DDX41Q9UJV9 622 aaKnown RBP6.17□□□□□ -1.42
LINC01539-206ENST00000593282 SLC5A6Q9Y289 635 aa6.17□□□□□ -1.42
LINC01539-206ENST00000593282 RIPOR2Q9Y4F9 1068 aa6.17□□□□□ -1.42
LINC01539-206ENST00000593282 AK5Q9Y6K8 562 aa6.17□□□□□ -1.42
LINC01539-206ENST00000593282 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
LINC01539-206ENST00000593282 ECEL1O95672 775 aa6.16□□□□□ -1.42
LINC01539-206ENST00000593282 IBSPP21815 317 aaPredicted RBP6.16□□□□□ -1.42
LINC01539-206ENST00000593282 HNRNPUQ00839 825 aaKnown RBP eCLIP6.16□□□□□ -1.42
LINC01539-206ENST00000593282 PLCL1Q15111 1095 aa6.16□□□□□ -1.42
LINC01539-206ENST00000593282 CBLL1Q75N03 491 aa6.16□□□□□ -1.42
LINC01539-206ENST00000593282 GATA6Q92908 595 aa6.16□□□□□ -1.42
LINC01539-206ENST00000593282 ACSS3Q9H6R3 686 aa6.16□□□□□ -1.42
LINC01539-206ENST00000593282 PIDD1Q9HB75 910 aa6.16□□□□□ -1.42
LINC01539-206ENST00000593282 INPP5FQ9Y2H2 1132 aa6.16□□□□□ -1.42
LINC01539-206ENST00000593282 NOP58Q9Y2X3 529 aaKnown RBP6.16□□□□□ -1.42
LINC01539-206ENST00000593282 LOC102724159A0A0B4J2E5 919 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 AOC2O75106 756 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 GADD45BO75293 160 aaPredicted RBP6.15□□□□□ -1.42
LINC01539-206ENST00000593282 B3GALT4O96024 378 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 CTSHP09668 335 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 AP3B2Q13367 1082 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 PWP2Q15269 919 aaKnown RBP6.15□□□□□ -1.42
LINC01539-206ENST00000593282 CYP27C1Q4G0S4 372 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 NFXL1Q6ZNB6 911 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 MCF2L2Q86YR7 1114 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 ZNF654Q8IZM8 581 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 STK11IPQ8N1F8 1099 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 ZCRB1Q8TBF4 217 aaKnown RBP6.15□□□□□ -1.42
LINC01539-206ENST00000593282 PSMD1Q99460 953 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 TRIM56Q9BRZ2 755 aaKnown RBP6.15□□□□□ -1.42
LINC01539-206ENST00000593282 ZNF576Q9H609 170 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 PAK6Q9NQU5 681 aaPredicted RBP6.15□□□□□ -1.42
LINC01539-206ENST00000593282 SPG7Q9UQ90 795 aa6.15□□□□□ -1.42
LINC01539-206ENST00000593282 STK10O94804 968 aaKnown RBP6.14□□□□□ -1.43
LINC01539-206ENST00000593282 CLSTN1O94985 981 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 FGRP09769 529 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 EIF4BP23588 611 aaKnown RBP6.14□□□□□ -1.43
LINC01539-206ENST00000593282 ANAPC15P60006 121 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 RACK1P63244 317 aaKnown RBP6.14□□□□□ -1.43
LINC01539-206ENST00000593282 KIAA0319Q5VV43 1072 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 NXPE4Q6UWF7 544 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 ARHGAP27Q6ZUM4 889 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 VPS37DQ86XT2 251 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 FAM9AQ8IZU1 332 aaPredicted RBP6.14□□□□□ -1.43
LINC01539-206ENST00000593282 CRELD1Q96HD1 420 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 FRMD6Q96NE9 622 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 BCO2Q9BYV7 579 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 SLC52A1Q9NWF4 448 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 KLHL42Q9P2K6 505 aa6.14□□□□□ -1.43
LINC01539-206ENST00000593282 BIN1O00499 593 aa6.13□□□□□ -1.43
LINC01539-206ENST00000593282 ITGB5P18084 799 aa6.13□□□□□ -1.43
LINC01539-206ENST00000593282 BMS1Q14692 1282 aaKnown RBP6.13□□□□□ -1.43
LINC01539-206ENST00000593282 NFE2L2Q16236 605 aa6.13□□□□□ -1.43
LINC01539-206ENST00000593282 ZNF394Q53GI3 561 aa6.13□□□□□ -1.43
LINC01539-206ENST00000593282 RNF187Q5TA31 235 aaPredicted RBP6.13□□□□□ -1.43
LINC01539-206ENST00000593282 OGFOD3Q6PK18 319 aa6.13□□□□□ -1.43
LINC01539-206ENST00000593282 WDR18Q9BV38 432 aa6.13□□□□□ -1.43
LINC01539-206ENST00000593282 ZC3H12CQ9C0D7 883 aaKnown RBP6.13□□□□□ -1.43
LINC01539-206ENST00000593282 C12orf49Q9H741 205 aa6.13□□□□□ -1.43
LINC01539-206ENST00000593282 DYNC1LI2O43237 492 aaPredicted RBP6.12□□□□□ -1.43
LINC01539-206ENST00000593282 SLFN14P0C7P3 912 aa6.12□□□□□ -1.43
LINC01539-206ENST00000593282 XRCC5P13010 732 aaKnown RBP6.12□□□□□ -1.43
LINC01539-206ENST00000593282 LIG1P18858 919 aa6.12□□□□□ -1.43
LINC01539-206ENST00000593282 ITPKAP23677 461 aa6.12□□□□□ -1.43
LINC01539-206ENST00000593282 ZNF157P51786 506 aaPredicted RBP6.12□□□□□ -1.43
LINC01539-206ENST00000593282 PTPN12Q05209 780 aaKnown RBP6.12□□□□□ -1.43
LINC01539-206ENST00000593282 GRM2Q14416 872 aa6.12□□□□□ -1.43
LINC01539-206ENST00000593282 ZNF574Q6ZN55 896 aaPredicted RBP6.12□□□□□ -1.43
LINC01539-206ENST00000593282 POU5F2Q8N7G0 328 aa6.12□□□□□ -1.43
LINC01539-206ENST00000593282 BCL7CQ8WUZ0 217 aaPredicted RBP6.12□□□□□ -1.43
LINC01539-206ENST00000593282 ATXN3LQ9H3M9 355 aa6.12□□□□□ -1.43
LINC01539-206ENST00000593282 C1GALT1Q9NS00 363 aa6.12□□□□□ -1.43
LINC01539-206ENST00000593282 MRPL42Q9Y6G3 142 aaKnown RBP6.12□□□□□ -1.43
LINC01539-206ENST00000593282 GIPC1O14908 333 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 RNGTTO60942 597 aaKnown RBP6.11□□□□□ -1.43
LINC01539-206ENST00000593282 PARNO95453 639 aaKnown RBP6.11□□□□□ -1.43
LINC01539-206ENST00000593282 C8AP07357 584 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 USP17L7P0C7H9 530 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 FAM87AP0C7U9 286 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 GJA8P48165 433 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 CDK5R2Q13319 367 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 SEZ6L2Q6UXD5 910 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 USP48Q86UV5 1035 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 GLIS3Q8NEA6 775 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 MISP3Q96FF7 219 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 GSX1Q9H4S2 264 aaPredicted RBP6.11□□□□□ -1.43
LINC01539-206ENST00000593282 PPP1R9AQ9ULJ8 1098 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 PCDHGB7Q9Y5F8 929 aa6.11□□□□□ -1.43
LINC01539-206ENST00000593282 ENPP3O14638 875 aa6.1□□□□□ -1.43
LINC01539-206ENST00000593282 TMPRSS2O15393 492 aa6.1□□□□□ -1.43
LINC01539-206ENST00000593282 TPD52L2O43399 206 aaKnown RBP6.1□□□□□ -1.43
LINC01539-206ENST00000593282 ID3Q02535 119 aa6.1□□□□□ -1.43
LINC01539-206ENST00000593282 ZNF792Q3KQV3 632 aa6.1□□□□□ -1.43
LINC01539-206ENST00000593282 MEI1Q5TIA1 1274 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms