RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 HMOX1P09601 288 aa10.08□□□□□ -0.8
VMP1-213ENST00000591877 MSX1P28360 303 aa10.08□□□□□ -0.8
VMP1-213ENST00000591877 SMTNP53814 917 aa10.08□□□□□ -0.8
VMP1-213ENST00000591877 PSMA6P60900 246 aaKnown RBP10.08□□□□□ -0.8
VMP1-213ENST00000591877 CNGB1Q14028 1251 aaPredicted RBP10.08□□□□□ -0.8
VMP1-213ENST00000591877 LBRQ14739 615 aaKnown RBP10.08□□□□□ -0.8
VMP1-213ENST00000591877 MSL1Q68DK7 614 aa10.08□□□□□ -0.8
VMP1-213ENST00000591877 C2orf49Q9BVC5 232 aaPredicted RBP10.08□□□□□ -0.8
VMP1-213ENST00000591877 SERTAD1Q9UHV2 236 aa10.08□□□□□ -0.8
VMP1-213ENST00000591877 TJP1Q07157 1748 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 DIAPH1O60610 1272 aaKnown RBP10.07□□□□□ -0.8
VMP1-213ENST00000591877 POLD1P28340 1107 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 GATA4P43694 442 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 FGD1P98174 961 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 C4orf17Q53FE4 359 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 EFHC2Q5JST6 749 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 SLC9A9Q8IVB4 645 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 FLAD1Q8NFF5 587 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 NLGN2Q8NFZ4 835 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 XAGE2Q96GT9 111 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 NDFIP2Q9NV92 336 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 CHMP3Q9Y3E7 222 aa10.07□□□□□ -0.8
VMP1-213ENST00000591877 CICQ96RK0 1608 aaPredicted RBP10.07□□□□□ -0.8
VMP1-213ENST00000591877 CDK2AP1O14519 115 aa10.06□□□□□ -0.8
VMP1-213ENST00000591877 TCF3P15923 654 aa10.06□□□□□ -0.8
VMP1-213ENST00000591877 YY1P25490 414 aa10.06□□□□□ -0.8
VMP1-213ENST00000591877 HIRAP54198 1017 aaPredicted RBP10.06□□□□□ -0.8
VMP1-213ENST00000591877 CABP4P57796 275 aa10.06□□□□□ -0.8
VMP1-213ENST00000591877 FOXD4L6Q3SYB3 417 aaPredicted RBP10.06□□□□□ -0.8
VMP1-213ENST00000591877 EAPPQ56P03 285 aaPredicted RBP10.06□□□□□ -0.8
VMP1-213ENST00000591877 C1orf141Q5JVX7 400 aa10.06□□□□□ -0.8
VMP1-213ENST00000591877 TMEM214Q6NUQ4 689 aaKnown RBP10.06□□□□□ -0.8
VMP1-213ENST00000591877 FOXD4L3Q6VB84 417 aaPredicted RBP10.06□□□□□ -0.8
VMP1-213ENST00000591877 MYO19Q96H55 970 aa10.06□□□□□ -0.8
VMP1-213ENST00000591877 LGR6Q9HBX8 967 aa10.06□□□□□ -0.8
VMP1-213ENST00000591877 MRC1P22897 1456 aa10.05□□□□□ -0.8
VMP1-213ENST00000591877 C4AP0C0L4 1744 aa10.05□□□□□ -0.8
VMP1-213ENST00000591877 STAU1O95793 577 aaKnown RBP10.05□□□□□ -0.8
VMP1-213ENST00000591877 MPSTP25325 297 aa10.05□□□□□ -0.8
VMP1-213ENST00000591877 HMGB2P26583 209 aaKnown RBP10.05□□□□□ -0.8
VMP1-213ENST00000591877 MTHFSDQ2M296 383 aaKnown RBP10.05□□□□□ -0.8
VMP1-213ENST00000591877 AKAP4Q5JQC9 854 aa10.05□□□□□ -0.8
VMP1-213ENST00000591877 GNASQ5JWF2 1037 aa10.05□□□□□ -0.8
VMP1-213ENST00000591877 CHSY3Q70JA7 882 aa10.05□□□□□ -0.8
VMP1-213ENST00000591877 KRTAP4-12Q9BQ66 201 aa10.05□□□□□ -0.8
VMP1-213ENST00000591877 STIM2Q9P246 746 aa10.05□□□□□ -0.8
VMP1-213ENST00000591877 RNMTO43148 476 aaKnown RBP10.04□□□□□ -0.8
VMP1-213ENST00000591877 TREHO43280 583 aa10.04□□□□□ -0.8
VMP1-213ENST00000591877 IGSF3O75054 1194 aa10.04□□□□□ -0.8
VMP1-213ENST00000591877 ARAFP10398 606 aa10.04□□□□□ -0.8
VMP1-213ENST00000591877 GTF2E1P29083 439 aaPredicted RBP10.04□□□□□ -0.8
VMP1-213ENST00000591877 TMC7Q7Z402 723 aa10.04□□□□□ -0.8
VMP1-213ENST00000591877 DMRTB1Q96MA1 342 aa10.04□□□□□ -0.8
VMP1-213ENST00000591877 BRPF3Q9ULD4 1205 aa10.04□□□□□ -0.8
VMP1-213ENST00000591877 SIPA1L3O60292 1781 aaPredicted RBP10.03□□□□□ -0.8
VMP1-213ENST00000591877 UBR2Q8IWV8 1755 aa10.03□□□□□ -0.8
VMP1-213ENST00000591877 FMR1Q06787 632 aaKnown RBP eCLIP10.03□□□□□ -0.8
VMP1-213ENST00000591877 RSPO4Q2I0M5 234 aaPredicted RBP10.03□□□□□ -0.8
VMP1-213ENST00000591877 SLC52A2Q9HAB3 445 aa10.03□□□□□ -0.8
VMP1-213ENST00000591877 IQSEC3Q9UPP2 1182 aaPredicted RBP10.03□□□□□ -0.8
VMP1-213ENST00000591877 HRH3Q9Y5N1 445 aa10.03□□□□□ -0.8
VMP1-213ENST00000591877 CNTNAP4Q9C0A0 1308 aa10.03□□□□□ -0.8
VMP1-213ENST00000591877 KIF13BQ9NQT8 1826 aa10.03□□□□□ -0.8
VMP1-213ENST00000591877 UTRNP46939 3433 aa10.03□□□□□ -0.8
VMP1-213ENST00000591877 KCPQ6ZWJ8 1503 aa10.02□□□□□ -0.8
VMP1-213ENST00000591877 KIAA1551Q9HCM1 1747 aa10.02□□□□□ -0.8
VMP1-213ENST00000591877 TNFRSF10BO14763 440 aa10.02□□□□□ -0.81
VMP1-213ENST00000591877 U2SURPO15042 1029 aaKnown RBP10.02□□□□□ -0.81
VMP1-213ENST00000591877 PPP2R1AP30153 589 aa10.02□□□□□ -0.81
VMP1-213ENST00000591877 COX20Q5RI15 118 aa10.02□□□□□ -0.81
VMP1-213ENST00000591877 SAP130Q9H0E3 1048 aa10.02□□□□□ -0.81
VMP1-213ENST00000591877 RPS6KA4O75676 772 aa10.01□□□□□ -0.81
VMP1-213ENST00000591877 YBX3P16989 372 aaKnown RBP eCLIP10.01□□□□□ -0.81
VMP1-213ENST00000591877 EIF1AXP47813 144 aaKnown RBP10.01□□□□□ -0.81
VMP1-213ENST00000591877 SLC39A6Q13433 755 aa10.01□□□□□ -0.81
VMP1-213ENST00000591877 TLR1Q15399 786 aa10.01□□□□□ -0.81
VMP1-213ENST00000591877 TEAD4Q15561 434 aa10.01□□□□□ -0.81
VMP1-213ENST00000591877 TRIM11Q96F44 468 aa10.01□□□□□ -0.81
VMP1-213ENST00000591877 RTCBQ9Y3I0 505 aaKnown RBP10.01□□□□□ -0.81
VMP1-213ENST00000591877 P4HBP07237 508 aaKnown RBP10□□□□□ -0.81
VMP1-213ENST00000591877 CRKLP46109 303 aaKnown RBP10□□□□□ -0.81
VMP1-213ENST00000591877 GPR162Q16538 588 aa10□□□□□ -0.81
VMP1-213ENST00000591877 TRAPPC3LQ5T215 181 aa10□□□□□ -0.81
VMP1-213ENST00000591877 IL17REQ8NFR9 667 aa10□□□□□ -0.81
VMP1-213ENST00000591877 ALKBH8Q96BT7 664 aaKnown RBP10□□□□□ -0.81
VMP1-213ENST00000591877 PHACTR3Q96KR7 559 aa10□□□□□ -0.81
VMP1-213ENST00000591877 PLVAPQ9BX97 442 aa10□□□□□ -0.81
VMP1-213ENST00000591877 CD2APQ9Y5K6 639 aa10□□□□□ -0.81
VMP1-213ENST00000591877 GOLGB1Q14789 3259 aaKnown RBP9.99□□□□□ -0.81
VMP1-213ENST00000591877 N4BP2Q86UW6 1770 aaPredicted RBP9.99□□□□□ -0.81
VMP1-213ENST00000591877 SERTM1A2A2V5 107 aa9.99□□□□□ -0.81
VMP1-213ENST00000591877 FZD6O60353 706 aa9.99□□□□□ -0.81
VMP1-213ENST00000591877 GYS1P13807 737 aa9.99□□□□□ -0.81
VMP1-213ENST00000591877 INTS5Q6P9B9 1019 aaKnown RBP9.99□□□□□ -0.81
VMP1-213ENST00000591877 DNAJC10Q8IXB1 793 aa9.99□□□□□ -0.81
VMP1-213ENST00000591877 FAM129BQ96TA1 746 aa9.99□□□□□ -0.81
VMP1-213ENST00000591877 KLF15Q9UIH9 416 aa9.99□□□□□ -0.81
VMP1-213ENST00000591877 EML1O00423 815 aa9.98□□□□□ -0.81
VMP1-213ENST00000591877 RECKO95980 971 aa9.98□□□□□ -0.81
VMP1-213ENST00000591877 MMP10P09238 476 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms