RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TCRBV5S4A2TA0A5A2 114 aa25.97■■□□□ 1.75
R3HDM4-206ENST00000590454 TLR2O60603 784 aa25.97■■□□□ 1.75
R3HDM4-206ENST00000590454 MYCP01106 439 aaPredicted RBP25.97■■□□□ 1.75
R3HDM4-206ENST00000590454 KBTBD3Q8NAB2 608 aa25.97■■□□□ 1.75
R3HDM4-206ENST00000590454 H0YGN5 161 aa25.96■■□□□ 1.75
R3HDM4-206ENST00000590454 GNRH1P01148 92 aa25.96■■□□□ 1.75
R3HDM4-206ENST00000590454 CETPP11597 493 aa25.96■■□□□ 1.75
R3HDM4-206ENST00000590454 SLF2Q8IX21 1173 aa25.96■■□□□ 1.75
R3HDM4-206ENST00000590454 ZCCHC17Q9NP64 241 aaKnown RBP25.96■■□□□ 1.75
R3HDM4-206ENST00000590454 USP40Q9NVE5 1235 aa25.96■■□□□ 1.75
R3HDM4-206ENST00000590454 CENPFP49454 3210 aa25.96■■□□□ 1.75
R3HDM4-206ENST00000590454 MYH7P12883 1935 aa25.96■■□□□ 1.75
R3HDM4-206ENST00000590454 ZNF532Q9HCE3 1301 aa25.95■■□□□ 1.75
R3HDM4-206ENST00000590454 OTOFQ9HC10 1997 aa25.95■■□□□ 1.75
R3HDM4-206ENST00000590454 SPDYE5A6NIY4 337 aa25.95■■□□□ 1.74
R3HDM4-206ENST00000590454 LDHCP07864 332 aa25.95■■□□□ 1.74
R3HDM4-206ENST00000590454 ADD2P35612 726 aa25.95■■□□□ 1.74
R3HDM4-206ENST00000590454 DYNLL1P63167 89 aaKnown RBP25.95■■□□□ 1.74
R3HDM4-206ENST00000590454 LACTBP83111 547 aaPredicted RBP25.95■■□□□ 1.74
R3HDM4-206ENST00000590454 MIGA1Q8NAN2 632 aa25.95■■□□□ 1.74
R3HDM4-206ENST00000590454 SH3TC2Q8TF17 1288 aa25.95■■□□□ 1.74
R3HDM4-206ENST00000590454 PRMT2P55345 433 aa25.94■■□□□ 1.74
R3HDM4-206ENST00000590454 RHBDL3P58872 404 aa25.94■■□□□ 1.74
R3HDM4-206ENST00000590454 ARHGAP39Q9C0H5 1083 aa25.94■■□□□ 1.74
R3HDM4-206ENST00000590454 AATFQ9NY61 560 aaKnown RBP eCLIP25.94■■□□□ 1.74
R3HDM4-206ENST00000590454 GSPT1P15170 499 aaKnown RBP25.93■■□□□ 1.74
R3HDM4-206ENST00000590454 NFIAQ12857 509 aa25.93■■□□□ 1.74
R3HDM4-206ENST00000590454 ERO1BQ86YB8 467 aa25.93■■□□□ 1.74
R3HDM4-206ENST00000590454 SH3RF3Q8TEJ3 882 aaPredicted RBP25.93■■□□□ 1.74
R3HDM4-206ENST00000590454 BTBD19C9JJ37 291 aa25.92■■□□□ 1.74
R3HDM4-206ENST00000590454 IGSF3O75054 1194 aa25.92■■□□□ 1.74
R3HDM4-206ENST00000590454 TTC22Q5TAA0 569 aa25.92■■□□□ 1.74
R3HDM4-206ENST00000590454 FSD1Q9BTV5 496 aa25.92■■□□□ 1.74
R3HDM4-206ENST00000590454 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.92■■□□□ 1.741e-10■■□□□ 12.1
R3HDM4-206ENST00000590454 TRIM6-TRIM34B2RNG4 842 aa25.91■■□□□ 1.74
R3HDM4-206ENST00000590454 SNAPC2Q13487 334 aa25.91■■□□□ 1.74
R3HDM4-206ENST00000590454 RILPL2Q969X0 211 aa25.91■■□□□ 1.74
R3HDM4-206ENST00000590454 EVI5LQ96CN4 794 aa25.91■■□□□ 1.74
R3HDM4-206ENST00000590454 SNCAIPQ9Y6H5 919 aa25.91■■□□□ 1.74
R3HDM4-206ENST00000590454 BRCA2P51587 3418 aa25.91■■□□□ 1.74
R3HDM4-206ENST00000590454 RGS3P49796 1198 aa25.9■■□□□ 1.74
R3HDM4-206ENST00000590454 PPP4CP60510 307 aa25.9■■□□□ 1.74
R3HDM4-206ENST00000590454 HOOK2Q96ED9 719 aa25.9■■□□□ 1.74
R3HDM4-206ENST00000590454 DDX4Q9NQI0 724 aaKnown RBP25.9■■□□□ 1.74
R3HDM4-206ENST00000590454 FAM198AQ9UFP1 575 aa25.9■■□□□ 1.74
R3HDM4-206ENST00000590454 RFX7Q2KHR2 1363 aa25.9■■□□□ 1.74
R3HDM4-206ENST00000590454 IRF6O14896 467 aa25.89■■□□□ 1.74
R3HDM4-206ENST00000590454 RNF113AO15541 343 aaKnown RBP25.89■■□□□ 1.74
R3HDM4-206ENST00000590454 UBE3CQ15386 1083 aa25.89■■□□□ 1.74
R3HDM4-206ENST00000590454 ZFPM1Q8IX07 1006 aa25.89■■□□□ 1.74
R3HDM4-206ENST00000590454 WRNIP1Q96S55 665 aa25.89■■□□□ 1.74
R3HDM4-206ENST00000590454 RIOK1Q9BRS2 568 aaKnown RBP25.89■■□□□ 1.74
R3HDM4-206ENST00000590454 PPIL2Q13356 520 aa25.88■■□□□ 1.73
R3HDM4-206ENST00000590454 CHRDL2Q6WN34 429 aa25.88■■□□□ 1.73
R3HDM4-206ENST00000590454 DPF3Q92784 378 aa25.88■■□□□ 1.73
R3HDM4-206ENST00000590454 ZKSCAN4Q969J2 545 aaPredicted RBP25.88■■□□□ 1.73
R3HDM4-206ENST00000590454 PUS7LQ9H0K6 701 aaKnown RBP25.88■■□□□ 1.73
R3HDM4-206ENST00000590454 TMOD2Q9NZR1 351 aa25.88■■□□□ 1.73
R3HDM4-206ENST00000590454 CDK5RAP2Q96SN8 1893 aa25.87■■□□□ 1.73
R3HDM4-206ENST00000590454 MAGEB6P1A0A0J9YX57 407 aa25.87■■□□□ 1.73
R3HDM4-206ENST00000590454 BAG3O95817 575 aa25.87■■□□□ 1.73
R3HDM4-206ENST00000590454 TCP10Q12799 353 aa25.87■■□□□ 1.73
R3HDM4-206ENST00000590454 ZSCAN25Q6NSZ9 544 aa25.87■■□□□ 1.73
R3HDM4-206ENST00000590454 FAM83AQ86UY5 434 aa25.87■■□□□ 1.73
R3HDM4-206ENST00000590454 OSBP2Q969R2 916 aa25.87■■□□□ 1.73
R3HDM4-206ENST00000590454 SEC62Q99442 399 aaKnown RBP25.87■■□□□ 1.73
R3HDM4-206ENST00000590454 NOL10Q9BSC4 688 aaKnown RBP25.87■■□□□ 1.73
R3HDM4-206ENST00000590454 SDSP20132 328 aa25.86■■□□□ 1.73
R3HDM4-206ENST00000590454 HOXD10P28358 340 aa25.86■■□□□ 1.73
R3HDM4-206ENST00000590454 PICALMQ13492 652 aa25.86■■□□□ 1.73
R3HDM4-206ENST00000590454 TMED8Q6PL24 325 aaPredicted RBP25.86■■□□□ 1.73
R3HDM4-206ENST00000590454 C17orf99Q6UX52 265 aa25.86■■□□□ 1.73
R3HDM4-206ENST00000590454 TEX11Q8IYF3 940 aa25.86■■□□□ 1.73
R3HDM4-206ENST00000590454 LCORLQ8N3X6 602 aa25.86■■□□□ 1.73
R3HDM4-206ENST00000590454 NKX2-3Q8TAU0 364 aa25.86■■□□□ 1.73
R3HDM4-206ENST00000590454 ARMT1Q9H993 441 aa25.86■■□□□ 1.73
R3HDM4-206ENST00000590454 AK9Q5TCS8 1911 aa25.86■■□□□ 1.73
R3HDM4-206ENST00000590454 M0R2C6 588 aa25.85■■□□□ 1.73
R3HDM4-206ENST00000590454 MBD4O95243 580 aa25.85■■□□□ 1.73
R3HDM4-206ENST00000590454 MTFR1Q15390 333 aa25.85■■□□□ 1.73
R3HDM4-206ENST00000590454 FKBP1CQ5VVH2 108 aa25.85■■□□□ 1.73
R3HDM4-206ENST00000590454 DCAF15Q66K64 600 aa25.85■■□□□ 1.73
R3HDM4-206ENST00000590454 IDI2Q9BXS1 227 aa25.85■■□□□ 1.73
R3HDM4-206ENST00000590454 SRRDQ9UH36 339 aa25.85■■□□□ 1.73
R3HDM4-206ENST00000590454 ZFYP08048 801 aaPredicted RBP25.84■■□□□ 1.73
R3HDM4-206ENST00000590454 PSMC4P43686 418 aa25.84■■□□□ 1.73
R3HDM4-206ENST00000590454 PPATQ06203 517 aa25.84■■□□□ 1.73
R3HDM4-206ENST00000590454 APPBP2Q92624 585 aa25.84■■□□□ 1.73
R3HDM4-206ENST00000590454 SHISA4Q96DD7 197 aa25.84■■□□□ 1.73
R3HDM4-206ENST00000590454 ECM2O94769 699 aaPredicted RBP25.83■■□□□ 1.73
R3HDM4-206ENST00000590454 ZMYM1Q5SVZ6 1142 aa25.83■■□□□ 1.73
R3HDM4-206ENST00000590454 TGFBRAP1Q8WUH2 860 aa25.83■■□□□ 1.73
R3HDM4-206ENST00000590454 FAM227BQ96M60 508 aa25.83■■□□□ 1.73
R3HDM4-206ENST00000590454 RBM27Q9P2N5 1060 aaKnown RBP25.83■■□□□ 1.73
R3HDM4-206ENST00000590454 CPA4Q9UI42 421 aa25.83■■□□□ 1.73
R3HDM4-206ENST00000590454 FOCADQ5VW36 1801 aa25.82■■□□□ 1.72
R3HDM4-206ENST00000590454 PRKAB2O43741 272 aa25.82■■□□□ 1.72
R3HDM4-206ENST00000590454 PLCG2P16885 1265 aa25.82■■□□□ 1.72
R3HDM4-206ENST00000590454 SH3BP5LQ7L8J4 393 aa25.82■■□□□ 1.72
R3HDM4-206ENST00000590454 ANKRD23Q86SG2 305 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms