RNA–Protein interactions for RNA: ENST00000590212.1

SNRPD2-208, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD2, Length 454 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-208ENST00000590212 TRMT44Q8IYL2 757 aaKnown RBP12.13□□□□□ -0.47
SNRPD2-208ENST00000590212 ZNF280CQ8ND82 737 aa12.13□□□□□ -0.47
SNRPD2-208ENST00000590212 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
SNRPD2-208ENST00000590212 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
SNRPD2-208ENST00000590212 DDX4Q9NQI0 724 aaKnown RBP12.13□□□□□ -0.47
SNRPD2-208ENST00000590212 MORF4L1Q9UBU8 362 aa12.13□□□□□ -0.47
SNRPD2-208ENST00000590212 VCANP13611 3396 aa12.13□□□□□ -0.47
SNRPD2-208ENST00000590212 GAKO14976 1311 aa12.12□□□□□ -0.47
SNRPD2-208ENST00000590212 EYA2O00167 538 aa12.12□□□□□ -0.47
SNRPD2-208ENST00000590212 TBC1D12O60347 775 aa12.12□□□□□ -0.47
SNRPD2-208ENST00000590212 ZKSCAN1P17029 563 aaPredicted RBP12.12□□□□□ -0.47
SNRPD2-208ENST00000590212 HMGCS2P54868 508 aa12.12□□□□□ -0.47
SNRPD2-208ENST00000590212 CACNB2Q08289 660 aaPredicted RBP12.12□□□□□ -0.47
SNRPD2-208ENST00000590212 PICALMQ13492 652 aa12.12□□□□□ -0.47
SNRPD2-208ENST00000590212 LHX8Q68G74 356 aa12.12□□□□□ -0.47
SNRPD2-208ENST00000590212 SYMPKQ92797 1274 aaKnown RBP12.12□□□□□ -0.47
SNRPD2-208ENST00000590212 TBC1D2Q9BYX2 928 aa12.12□□□□□ -0.47
SNRPD2-208ENST00000590212 OSBPL5Q9H0X9 879 aaPredicted RBP12.12□□□□□ -0.47
SNRPD2-208ENST00000590212 MAST2Q6P0Q8 1798 aa12.11□□□□□ -0.47
SNRPD2-208ENST00000590212 SEMA3EO15041 775 aa12.11□□□□□ -0.47
SNRPD2-208ENST00000590212 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
SNRPD2-208ENST00000590212 SH3D19Q5HYK7 790 aa12.11□□□□□ -0.47
SNRPD2-208ENST00000590212 WDR63Q8IWG1 891 aa12.11□□□□□ -0.47
SNRPD2-208ENST00000590212 SLF2Q8IX21 1173 aa12.11□□□□□ -0.47
SNRPD2-208ENST00000590212 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
SNRPD2-208ENST00000590212 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNRPD2-208ENST00000590212 DENND2AQ9ULE3 1009 aa12.11□□□□□ -0.47
SNRPD2-208ENST00000590212 ATAD5Q96QE3 1844 aa12.11□□□□□ -0.47
SNRPD2-208ENST00000590212 FAM196BA6NMK8 535 aa12.1□□□□□ -0.47
SNRPD2-208ENST00000590212 CCND3P30281 292 aaPredicted RBP12.1□□□□□ -0.47
SNRPD2-208ENST00000590212 BTDP43251 543 aa12.1□□□□□ -0.47
SNRPD2-208ENST00000590212 IRX3P78415 501 aaPredicted RBP12.1□□□□□ -0.47
SNRPD2-208ENST00000590212 ATP2B3Q16720 1220 aa12.1□□□□□ -0.47
SNRPD2-208ENST00000590212 DZIP1Q86YF9 867 aaKnown RBP12.1□□□□□ -0.47
SNRPD2-208ENST00000590212 GPRC5AQ8NFJ5 357 aa12.1□□□□□ -0.47
SNRPD2-208ENST00000590212 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
SNRPD2-208ENST00000590212 SEMA6BQ9H3T3 888 aa12.1□□□□□ -0.47
SNRPD2-208ENST00000590212 PRKAG2Q9UGJ0 569 aa12.1□□□□□ -0.47
SNRPD2-208ENST00000590212 FRMPD3Q5JV73 1810 aa12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 LAMA2P24043 3122 aaKnown RBP12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 SPTBN5Q9NRC6 3674 aaKnown RBP12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 USP17L5A8MUK1 530 aa12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 COL9A1P20849 921 aa12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 MAPK4P31152 587 aa12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 RGS2P41220 211 aa12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 RFX5P48382 616 aaPredicted RBP12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 ATG9AQ7Z3C6 839 aa12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 USP6NLQ92738 828 aa12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 SENP6Q9GZR1 1112 aaPredicted RBP12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 AS3MTQ9HBK9 375 aa12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 LTBP2Q14767 1821 aa12.09□□□□□ -0.47
SNRPD2-208ENST00000590212 ZBTB22O15209 634 aa12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 HOXA7P31268 230 aaPredicted RBP12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 CAP2P40123 477 aa12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 PHKA1P46020 1223 aa12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 CCL14Q16627 93 aa12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 CCAR1Q8IX12 1150 aaKnown RBP12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 MYLIPQ8WY64 445 aa12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 P2RX7Q99572 595 aaKnown RBP12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 APBA2Q99767 749 aa12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 TXNRD2Q9NNW7 524 aa12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 ABCF2Q9UG63 623 aa12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 MROH7-TTC4A0A0A0MT08 1334 aa12.08□□□□□ -0.48
SNRPD2-208ENST00000590212 PEX10O60683 326 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 FOSL2P15408 326 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 ATN1P54259 1190 aaPredicted RBP12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 RHBDL3P58872 404 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 HERVK_113P62684 666 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 SMAD3P84022 425 aaKnown RBP12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 MTMR2Q13614 643 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 SHHQ15465 462 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 MORN1Q5T089 497 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 SPTY2D1Q68D10 685 aaPredicted RBP12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 GPR142Q7Z601 462 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 TTYH1Q9H313 450 aaPredicted RBP12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 TMOD4Q9NZQ9 345 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 CEP126Q9P2H0 1117 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 FBXO3Q9UK99 471 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 EYSQ5T1H1 3165 aa12.07□□□□□ -0.48
SNRPD2-208ENST00000590212 PRUNE2Q8WUY3 3088 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 GPR75-ASB3A0A0A6YYF3 556 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 CIAO1O76071 339 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 BACE1P56817 501 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 RTP1P59025 263 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 ERVK-9P63128 1117 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 ERVK-24P63145 666 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 RASGRF1Q13972 1273 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 RRP1BQ14684 758 aaKnown RBP12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 C9orf50Q5SZB4 431 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 CCDC102BQ68D86 513 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 PLEKHH3Q7Z736 793 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 WDR18Q9BV38 432 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 USP44Q9H0E7 712 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 PORCNQ9H237 461 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 RBPJLQ9UBG7 517 aa12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 SALL2Q9Y467 1007 aaPredicted RBP12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 PDS5AQ29RF7 1337 aaKnown RBP12.06□□□□□ -0.48
SNRPD2-208ENST00000590212 TNFRSF10AO00220 468 aa12.05□□□□□ -0.48
SNRPD2-208ENST00000590212 DNM1LO00429 736 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8761.5 ms