RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 METTL16Q86W50 562 aaKnown RBP13.65□□□□□ -0.22
DDX39A-210ENST00000589675 SH3RF3Q8TEJ3 882 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-210ENST00000589675 EAF2Q96CJ1 260 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-210ENST00000589675 TRIM47Q96LD4 638 aa13.65□□□□□ -0.22
DDX39A-210ENST00000589675 TMEM106CQ9BVX2 250 aa13.65□□□□□ -0.22
DDX39A-210ENST00000589675 PI4KBQ9UBF8 816 aa13.65□□□□□ -0.22
DDX39A-210ENST00000589675 SRRDQ9UH36 339 aa13.65□□□□□ -0.22
DDX39A-210ENST00000589675 SIPA1L1O43166 1804 aa13.64□□□□□ -0.23
DDX39A-210ENST00000589675 LOC285556D6RIA3 1793 aa13.64□□□□□ -0.23
DDX39A-210ENST00000589675 SLC34A2O95436 690 aa13.64□□□□□ -0.23
DDX39A-210ENST00000589675 SLURP2P0DP57 97 aa13.64□□□□□ -0.23
DDX39A-210ENST00000589675 CTGFP29279 349 aa13.64□□□□□ -0.23
DDX39A-210ENST00000589675 CAP2P40123 477 aa13.64□□□□□ -0.23
DDX39A-210ENST00000589675 ZAP70P43403 619 aa13.64□□□□□ -0.23
DDX39A-210ENST00000589675 HSP90AB4PQ58FF6 505 aa13.64□□□□□ -0.23
DDX39A-210ENST00000589675 CERS3Q8IU89 383 aa13.64□□□□□ -0.23
DDX39A-210ENST00000589675 PROCA1Q8NCQ7 364 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-210ENST00000589675 PANK1Q8TE04 598 aa13.64□□□□□ -0.23
DDX39A-210ENST00000589675 AATFQ9NY61 560 aaKnown RBP eCLIP13.64□□□□□ -0.23
DDX39A-210ENST00000589675 CYP2C8P10632 490 aa13.63□□□□□ -0.23
DDX39A-210ENST00000589675 EN2P19622 333 aaPredicted RBP13.63□□□□□ -0.23
DDX39A-210ENST00000589675 GADL1Q6ZQY3 521 aa13.63□□□□□ -0.23
DDX39A-210ENST00000589675 ADGRA1Q86SQ6 560 aa13.63□□□□□ -0.23
DDX39A-210ENST00000589675 FOXP4Q8IVH2 680 aaPredicted RBP13.63□□□□□ -0.23
DDX39A-210ENST00000589675 CCDC8Q9H0W5 538 aaPredicted RBP13.63□□□□□ -0.23
DDX39A-210ENST00000589675 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
DDX39A-210ENST00000589675 TLR7Q9NYK1 1049 aaKnown RBP13.63□□□□□ -0.23
DDX39A-210ENST00000589675 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
DDX39A-210ENST00000589675 DOCK3Q8IZD9 2030 aa13.63□□□□□ -0.23
DDX39A-210ENST00000589675 MYH1P12882 1939 aa13.62□□□□□ -0.23
DDX39A-210ENST00000589675 TRIM75PA6NK02 468 aa13.62□□□□□ -0.23
DDX39A-210ENST00000589675 FAM196BA6NMK8 535 aa13.62□□□□□ -0.23
DDX39A-210ENST00000589675 USP17L5A8MUK1 530 aa13.62□□□□□ -0.23
DDX39A-210ENST00000589675 FMNL1O95466 1100 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-210ENST00000589675 OSBPP22059 807 aa13.62□□□□□ -0.23
DDX39A-210ENST00000589675 FCGRTP55899 365 aa13.62□□□□□ -0.23
DDX39A-210ENST00000589675 RPAP2Q8IXW5 612 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-210ENST00000589675 ZNF280CQ8ND82 737 aa13.62□□□□□ -0.23
DDX39A-210ENST00000589675 TGFBRAP1Q8WUH2 860 aa13.62□□□□□ -0.23
DDX39A-210ENST00000589675 PIH1D3Q9NQM4 214 aaKnown RBP13.62□□□□□ -0.23
DDX39A-210ENST00000589675 FLT1P17948 1338 aa13.62□□□□□ -0.23
DDX39A-210ENST00000589675 CEP290O15078 2479 aa13.61□□□□□ -0.23
DDX39A-210ENST00000589675 SPP2Q13103 211 aa13.61□□□□□ -0.23
DDX39A-210ENST00000589675 RRP1BQ14684 758 aaKnown RBP13.61□□□□□ -0.23
DDX39A-210ENST00000589675 SH3D19Q5HYK7 790 aa13.61□□□□□ -0.23
DDX39A-210ENST00000589675 SH3TC2Q8TF17 1288 aa13.61□□□□□ -0.23
DDX39A-210ENST00000589675 WDR18Q9BV38 432 aa13.61□□□□□ -0.23
DDX39A-210ENST00000589675 CHMP4BQ9H444 224 aaKnown RBP13.61□□□□□ -0.23
DDX39A-210ENST00000589675 ZBTB40Q9NUA8 1239 aa13.61□□□□□ -0.23
DDX39A-210ENST00000589675 PNMA3Q9UL41 463 aa13.61□□□□□ -0.23
DDX39A-210ENST00000589675 DDX19BQ9UMR2 479 aa13.61□□□□□ -0.23
DDX39A-210ENST00000589675 EXOC6BQ9Y2D4 811 aa13.61□□□□□ -0.23
DDX39A-210ENST00000589675 ASNSP08243 561 aa13.6□□□□□ -0.23
DDX39A-210ENST00000589675 CYP7A1P22680 504 aa13.6□□□□□ -0.23
DDX39A-210ENST00000589675 GRK4P32298 578 aa13.6□□□□□ -0.23
DDX39A-210ENST00000589675 MAP3K12Q12852 859 aa13.6□□□□□ -0.23
DDX39A-210ENST00000589675 PABPC4Q13310 644 aaKnown RBP eCLIP13.6□□□□□ -0.23
DDX39A-210ENST00000589675 SLC4A8Q2Y0W8 1093 aa13.6□□□□□ -0.23
DDX39A-210ENST00000589675 AACSQ86V21 672 aa13.6□□□□□ -0.23
DDX39A-210ENST00000589675 MAPKAPK5Q8IW41 473 aa13.6□□□□□ -0.23
DDX39A-210ENST00000589675 RHPN1Q8TCX5 695 aa13.6□□□□□ -0.23
DDX39A-210ENST00000589675 RAET1EQ8TD07 263 aa13.6□□□□□ -0.23
DDX39A-210ENST00000589675 AS3MTQ9HBK9 375 aa13.6□□□□□ -0.23
DDX39A-210ENST00000589675 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-210ENST00000589675 MYPNQ86TC9 1320 aa13.6□□□□□ -0.23
DDX39A-210ENST00000589675 HMMRO75330 724 aa13.59□□□□□ -0.23
DDX39A-210ENST00000589675 IDH1O75874 414 aaKnown RBP13.59□□□□□ -0.23
DDX39A-210ENST00000589675 GCLCP48506 637 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-210ENST00000589675 FAM110CQ1W6H9 321 aa13.59□□□□□ -0.23
DDX39A-210ENST00000589675 TREML2Q5T2D2 321 aa13.59□□□□□ -0.23
DDX39A-210ENST00000589675 CCDC84Q86UT8 332 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-210ENST00000589675 SMCR8Q8TEV9 937 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-210ENST00000589675 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.59□□□□□ -0.23
DDX39A-210ENST00000589675 KIF1BPQ96EK5 621 aa13.59□□□□□ -0.23
DDX39A-210ENST00000589675 DNAJC18Q9H819 358 aa13.59□□□□□ -0.23
DDX39A-210ENST00000589675 PALD1Q9ULE6 856 aa13.59□□□□□ -0.23
DDX39A-210ENST00000589675 RAB11FIP3O75154 756 aa13.58□□□□□ -0.24
DDX39A-210ENST00000589675 HLA-DOAP06340 250 aa13.58□□□□□ -0.24
DDX39A-210ENST00000589675 CAPN2P17655 700 aa13.58□□□□□ -0.24
DDX39A-210ENST00000589675 DYNLL1P63167 89 aaKnown RBP13.58□□□□□ -0.24
DDX39A-210ENST00000589675 PRKCZQ05513 592 aa13.58□□□□□ -0.24
DDX39A-210ENST00000589675 IRF5Q13568 498 aa13.58□□□□□ -0.24
DDX39A-210ENST00000589675 TTF1Q15361 905 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-210ENST00000589675 SIRT2Q8IXJ6 389 aa13.58□□□□□ -0.24
DDX39A-210ENST00000589675 CLASRPQ8N2M8 674 aaKnown RBP13.58□□□□□ -0.24
DDX39A-210ENST00000589675 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-210ENST00000589675 MAGEB6Q8N7X4 407 aa13.58□□□□□ -0.24
DDX39A-210ENST00000589675 SLAIN1Q8ND83 568 aa13.58□□□□□ -0.24
DDX39A-210ENST00000589675 NKX2-3Q8TAU0 364 aa13.58□□□□□ -0.24
DDX39A-210ENST00000589675 C19orf81C9J6K1 198 aa13.57□□□□□ -0.24
DDX39A-210ENST00000589675 HOXA7P31268 230 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-210ENST00000589675 HMGCS2P54868 508 aa13.57□□□□□ -0.24
DDX39A-210ENST00000589675 BACE1P56817 501 aa13.57□□□□□ -0.24
DDX39A-210ENST00000589675 TATDN1Q6P1N9 297 aa13.57□□□□□ -0.24
DDX39A-210ENST00000589675 PXYLP1Q8TE99 480 aa13.57□□□□□ -0.24
DDX39A-210ENST00000589675 GCC1Q96CN9 775 aa13.57□□□□□ -0.24
DDX39A-210ENST00000589675 TRIM34Q9BYJ4 488 aa13.57□□□□□ -0.24
DDX39A-210ENST00000589675 EHD4Q9H223 541 aa13.57□□□□□ -0.24
DDX39A-210ENST00000589675 ANTXR1Q9H6X2 564 aa13.57□□□□□ -0.24
DDX39A-210ENST00000589675 RCAN3Q9UKA8 241 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms