RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 METTL5Q9NRN9 209 aaKnown RBP7.55□□□□□ -1.2
SMAD4-203ENST00000585448 CUX2O14529 1486 aa7.55□□□□□ -1.2
SMAD4-203ENST00000585448 SMARCA2P51531 1590 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 GSC2O15499 205 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 DRD2P14416 443 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 LIG1P18858 919 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 ERVK-24P63145 666 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 ID3Q02535 119 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 RING1Q06587 406 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 BECN1Q14457 450 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 ERMP1Q7Z2K6 904 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 ZSCAN30Q86W11 494 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 GRIN3AQ8TCU5 1115 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 GPBAR1Q8TDU6 330 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 PUS7Q96PZ0 661 aaKnown RBP7.54□□□□□ -1.2
SMAD4-203ENST00000585448 FAM83CQ9BQN1 747 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 YIPF2Q9BWQ6 316 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 ATXN3LQ9H3M9 355 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 PRDM10Q9NQV6 1147 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 POGKQ9P215 609 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 ACTL7BQ9Y614 415 aa7.54□□□□□ -1.2
SMAD4-203ENST00000585448 GAS2O43903 313 aaKnown RBP7.53□□□□□ -1.2
SMAD4-203ENST00000585448 ADAM23O75077 832 aa7.53□□□□□ -1.2
SMAD4-203ENST00000585448 BMP3P12645 472 aa7.53□□□□□ -1.2
SMAD4-203ENST00000585448 TRIM42Q8IWZ5 723 aa7.53□□□□□ -1.2
SMAD4-203ENST00000585448 ACSS3Q9H6R3 686 aa7.53□□□□□ -1.2
SMAD4-203ENST00000585448 CBX8Q9HC52 389 aa7.53□□□□□ -1.2
SMAD4-203ENST00000585448 KCNQ5Q9NR82 932 aa7.53□□□□□ -1.2
SMAD4-203ENST00000585448 PPP1R9AQ9ULJ8 1098 aa7.53□□□□□ -1.2
SMAD4-203ENST00000585448 NINLQ9Y2I6 1382 aa7.52□□□□□ -1.21
SMAD4-203ENST00000585448 K7ELQ4 463 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-203ENST00000585448 RECKO95980 971 aa7.52□□□□□ -1.21
SMAD4-203ENST00000585448 MSNP26038 577 aaKnown RBP7.52□□□□□ -1.21
SMAD4-203ENST00000585448 CCDC173Q0VFZ6 552 aa7.52□□□□□ -1.21
SMAD4-203ENST00000585448 HSP90AB3PQ58FF7 597 aa7.52□□□□□ -1.21
SMAD4-203ENST00000585448 AKAP4Q5JQC9 854 aa7.52□□□□□ -1.21
SMAD4-203ENST00000585448 PHC3Q8NDX5 983 aa7.52□□□□□ -1.21
SMAD4-203ENST00000585448 RHOVQ96L33 236 aa7.52□□□□□ -1.21
SMAD4-203ENST00000585448 FANCD2OSQ96PS1 177 aa7.52□□□□□ -1.21
SMAD4-203ENST00000585448 PSMD1Q99460 953 aa7.52□□□□□ -1.21
SMAD4-203ENST00000585448 ZC3H12CQ9C0D7 883 aaKnown RBP7.52□□□□□ -1.21
SMAD4-203ENST00000585448 SLC52A1Q9NWF4 448 aa7.52□□□□□ -1.21
SMAD4-203ENST00000585448 TACC3Q9Y6A5 838 aa7.52□□□□□ -1.21
SMAD4-203ENST00000585448 UQCRHLA0A096LP55 91 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 UQCRHP07919 91 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 FURINP09958 794 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 TFE3P19532 575 aaPredicted RBP7.51□□□□□ -1.21
SMAD4-203ENST00000585448 MAP4P27816 1152 aaKnown RBP7.51□□□□□ -1.21
SMAD4-203ENST00000585448 SGO2Q562F6 1265 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 CTR9Q6PD62 1173 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 HS2ST1Q7LGA3 356 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 MRRFQ96E11 262 aaKnown RBP7.51□□□□□ -1.21
SMAD4-203ENST00000585448 TMEM74Q96NL1 305 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 GRPEL1Q9HAV7 217 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 DISC1Q9NRI5 854 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 FAM105AQ9NUU6 356 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 STOML1Q9UBI4 398 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 AP4E1Q9UPM8 1137 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 NUDCQ9Y266 331 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 KIF3AQ9Y496 699 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 SNCAIPQ9Y6H5 919 aa7.51□□□□□ -1.21
SMAD4-203ENST00000585448 ZNF500O60304 480 aaPredicted RBP7.5□□□□□ -1.21
SMAD4-203ENST00000585448 MCM5P33992 734 aa7.5□□□□□ -1.21
SMAD4-203ENST00000585448 LMNB2Q03252 620 aa7.5□□□□□ -1.21
SMAD4-203ENST00000585448 GABPB1Q06547 395 aaPredicted RBP7.5□□□□□ -1.21
SMAD4-203ENST00000585448 CDPF1Q6NVV7 123 aa7.5□□□□□ -1.21
SMAD4-203ENST00000585448 SASS6Q6UVJ0 657 aa7.5□□□□□ -1.21
SMAD4-203ENST00000585448 BEND4Q6ZU67 534 aa7.5□□□□□ -1.21
SMAD4-203ENST00000585448 RNF214Q8ND24 703 aa7.5□□□□□ -1.21
SMAD4-203ENST00000585448 ACSBG1Q96GR2 724 aa7.5□□□□□ -1.21
SMAD4-203ENST00000585448 MIR1-1HGQ9H1L0 117 aa7.5□□□□□ -1.21
SMAD4-203ENST00000585448 CGNQ9P2M7 1197 aaKnown RBP7.5□□□□□ -1.21
SMAD4-203ENST00000585448 FANCGO15287 622 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 ITGB7P26010 798 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 ASPAP45381 313 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 USP11P51784 963 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 MAP7Q14244 749 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 CPSF6Q16630 551 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMAD4-203ENST00000585448 RNF43Q68DV7 783 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 SEZ6L2Q6UXD5 910 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 MPRIPQ6WCQ1 1025 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 DYMQ7RTS9 669 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 CREBRFQ8IUR6 639 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 RELL1Q8IUW5 271 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 TMEM87AQ8NBN3 555 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 TIGD1Q96MW7 591 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 PPP1R9BQ96SB3 815 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 SEMA6CQ9H3T2 930 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 C7orf69Q9H7B7 122 aa7.49□□□□□ -1.21
SMAD4-203ENST00000585448 KIAA1522Q9P206 1035 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-203ENST00000585448 BAZ1BQ9UIG0 1483 aaKnown RBP7.49□□□□□ -1.21
SMAD4-203ENST00000585448 FAM95CA0A1B0GW59 222 aa7.48□□□□□ -1.21
SMAD4-203ENST00000585448 UNCXA6NJT0 531 aa7.48□□□□□ -1.21
SMAD4-203ENST00000585448 SCAMP3O14828 347 aaKnown RBP7.48□□□□□ -1.21
SMAD4-203ENST00000585448 FANCCQ00597 558 aa7.48□□□□□ -1.21
SMAD4-203ENST00000585448 LMOD3Q0VAK6 560 aa7.48□□□□□ -1.21
SMAD4-203ENST00000585448 TSNAXIP1Q2TAA8 658 aa7.48□□□□□ -1.21
SMAD4-203ENST00000585448 CYFIP1Q7L576 1253 aa7.48□□□□□ -1.21
SMAD4-203ENST00000585448 EGFL6Q8IUX8 553 aa7.48□□□□□ -1.21
SMAD4-203ENST00000585448 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms