RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 GUCY1A2P33402 732 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 GYG1P46976 350 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 SAFBQ15424 915 aaKnown RBP eCLIP15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 SYCP1Q15431 976 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 ANKRD18AQ8IVF6 992 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 NOSTRINQ8IVI9 506 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 TMTC2Q8N394 836 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 SMARCC1Q92922 1105 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 CLIC6Q96NY7 704 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 GNL3LQ9NVN8 582 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 RREB1Q92766 1687 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 ZNF804BA4D1E1 1349 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 SPATA31A5Q5VU36 1347 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 SPATA31A7Q8IWB4 1347 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 KCNQ2O43526 872 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 CCDC82Q8N4S0 544 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 SDR42E1Q8WUS8 393 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 UBAC1Q9BSL1 405 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 MTA3Q9BTC8 594 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 MAGEB6P1A0A0J9YX57 407 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 CCDC196A0A1B0GTZ2 297 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 MINDY4BA8MYZ0 360 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 MMP1P03956 469 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 TPM4P67936 248 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 ERFEQ4G0M1 354 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 RESP18Q5W5W9 173 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 CLEC4GQ6UXB4 293 aa15.22■□□□□ 0.03
CSNK1D-222ENST00000584377 BTBD18B2RXH4 712 aa15.21■□□□□ 0.03
CSNK1D-222ENST00000584377 CUTAO60888 179 aa15.21■□□□□ 0.03
CSNK1D-222ENST00000584377 SKILP12757 684 aa15.21■□□□□ 0.03
CSNK1D-222ENST00000584377 TPD52L1Q16890 204 aaPredicted RBP15.21■□□□□ 0.03
CSNK1D-222ENST00000584377 DIS3L2Q8IYB7 885 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-222ENST00000584377 NUP133Q8WUM0 1156 aa15.21■□□□□ 0.03
CSNK1D-222ENST00000584377 FAM237AA0A1B0GTK4 181 aa15.21■□□□□ 0.02
CSNK1D-222ENST00000584377 SMC2O95347 1197 aa15.21■□□□□ 0.02
CSNK1D-222ENST00000584377 ISM2Q6H9L7 571 aa15.21■□□□□ 0.02
CSNK1D-222ENST00000584377 C3orf67Q6ZVT6 689 aa15.21■□□□□ 0.02
CSNK1D-222ENST00000584377 KCNJ14Q9UNX9 436 aa15.21■□□□□ 0.02
CSNK1D-222ENST00000584377 ECM29Q5VYK3 1845 aa15.21■□□□□ 0.02
CSNK1D-222ENST00000584377 LAMB2P55268 1798 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 WTIPA6NIX2 430 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 NUTM2BA6NNL0 878 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 SMTNL1A8MU46 457 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 NUTM2EB1AL46 878 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 TNNT1P13805 278 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 UBE4AQ14139 1066 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 NBPF11Q86T75 865 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 NUTM2AQ8IVF1 878 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 ZNF654Q8IZM8 581 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 CMTR1Q8N1G2 835 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 CRACR2BQ8N4Y2 399 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 FANCBQ8NB91 859 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 TUBE1Q9UJT0 475 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 COL4A1P02462 1669 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 NRAPQ86VF7 1730 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 BCORQ6W2J9 1755 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 DEXIO95424 95 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 RCAN1P53805 252 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 GSDMDP57764 484 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 CAVIN4Q5BKX8 364 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 KRI1Q8N9T8 703 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 ESR2Q92731 530 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 XPO4Q9C0E2 1151 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 BSDC1Q9NW68 430 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 IFNKQ9P0W0 207 aa15.2■□□□□ 0.02
CSNK1D-222ENST00000584377 NCAPHQ15003 741 aa15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 SF3B3Q15393 1217 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 BARGINQ6ZT62 677 aa15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 KIF18AQ8NI77 898 aa15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 KCNH3Q9ULD8 1083 aa15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 CCZ1BP86790 482 aa15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 CCZ1P86791 482 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 PNOCQ13519 176 aa15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 FOXP1Q9H334 677 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 IMPACTQ9P2X3 320 aa15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 ANAPC4Q9UJX5 808 aa15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 TNKSO95271 1327 aa15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 CICQ96RK0 1608 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-222ENST00000584377 IKBKBO14920 756 aa15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 TOB1P50616 345 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 NAA30Q147X3 362 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 RIOK1Q9BRS2 568 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 OSBPL5Q9H0X9 879 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 COL1A1P02452 1464 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 LONRF3Q496Y0 759 aa15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 RILPL1Q5EBL4 403 aa15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 BICDL1Q6ZP65 573 aa15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 LINC00116Q8NCU8 138 aa15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 CNNM3Q8NE01 707 aa15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 MINPP1Q9UNW1 487 aa15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 LMOD1P29536 600 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 KRBA2Q6ZNG9 492 aa15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 PAXIP1Q6ZW49 1069 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 METTL16Q86W50 562 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 KRT222Q8N1A0 295 aa15.18■□□□□ 0.02
CSNK1D-222ENST00000584377 SMIM22K7EJ46 135 aa15.17■□□□□ 0.02
CSNK1D-222ENST00000584377 TULP2O00295 520 aa15.17■□□□□ 0.02
CSNK1D-222ENST00000584377 CAPN2P17655 700 aa15.17■□□□□ 0.02
CSNK1D-222ENST00000584377 SEC23AQ15436 765 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms