RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 MVPQ14764 893 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-226ENST00000583182 PI16Q6UXB8 463 aa18.3■□□□□ 0.52
CDK5RAP3-226ENST00000583182 PROCA1Q8NCQ7 364 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-226ENST00000583182 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.3■□□□□ 0.52
CDK5RAP3-226ENST00000583182 HMG20BQ9P0W2 317 aa18.3■□□□□ 0.52
CDK5RAP3-226ENST00000583182 PNMA3Q9UL41 463 aa18.3■□□□□ 0.52
CDK5RAP3-226ENST00000583182 TBC1D9Q6ZT07 1266 aa18.29■□□□□ 0.52
CDK5RAP3-226ENST00000583182 DIS3LQ8TF46 1054 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-226ENST00000583182 NSUN4Q96CB9 384 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-226ENST00000583182 PAWRQ96IZ0 340 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-226ENST00000583182 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP3-226ENST00000583182 AKAP2Q9Y2D5 859 aa18.29■□□□□ 0.52
CDK5RAP3-226ENST00000583182 PLXNB2O15031 1838 aa18.28■□□□□ 0.52
CDK5RAP3-226ENST00000583182 COL2A1P02458 1487 aaPredicted RBP18.28■□□□□ 0.52
CDK5RAP3-226ENST00000583182 SOX1O00570 391 aaPredicted RBP18.28■□□□□ 0.52
CDK5RAP3-226ENST00000583182 SRGAP3O43295 1099 aa18.28■□□□□ 0.52
CDK5RAP3-226ENST00000583182 CAPN2P17655 700 aa18.28■□□□□ 0.52
CDK5RAP3-226ENST00000583182 HMGCS2P54868 508 aa18.28■□□□□ 0.52
CDK5RAP3-226ENST00000583182 ZNF280CQ8ND82 737 aa18.28■□□□□ 0.52
CDK5RAP3-226ENST00000583182 NEUROD6Q96NK8 337 aa18.28■□□□□ 0.52
CDK5RAP3-226ENST00000583182 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDK5RAP3-226ENST00000583182 STAP2Q9UGK3 403 aa18.28■□□□□ 0.52
CDK5RAP3-226ENST00000583182 SIPA1L1O43166 1804 aa18.28■□□□□ 0.52
CDK5RAP3-226ENST00000583182 COL6A3P12111 3177 aa18.27■□□□□ 0.52
CDK5RAP3-226ENST00000583182 A0A1W2PPC1 479 aa18.27■□□□□ 0.52
CDK5RAP3-226ENST00000583182 CT47B1P0C2W7 299 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP3-226ENST00000583182 CAP2P40123 477 aa18.27■□□□□ 0.52
CDK5RAP3-226ENST00000583182 MTX1Q13505 466 aa18.27■□□□□ 0.52
CDK5RAP3-226ENST00000583182 SPATA5Q8NB90 893 aa18.27■□□□□ 0.52
CDK5RAP3-226ENST00000583182 GJD2Q9UKL4 321 aa18.27■□□□□ 0.52
CDK5RAP3-226ENST00000583182 LDHCP07864 332 aa18.26■□□□□ 0.51
CDK5RAP3-226ENST00000583182 GCLCP48506 637 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP3-226ENST00000583182 TRIM32Q13049 653 aa18.26■□□□□ 0.51
CDK5RAP3-226ENST00000583182 LRCH3Q96II8 777 aa18.26■□□□□ 0.51
CDK5RAP3-226ENST00000583182 ASCC2Q9H1I8 757 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP3-226ENST00000583182 USP17L5A8MUK1 530 aa18.25■□□□□ 0.51
CDK5RAP3-226ENST00000583182 MAP4K4O95819 1239 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP3-226ENST00000583182 HMGCRP04035 888 aa18.25■□□□□ 0.51
CDK5RAP3-226ENST00000583182 GSTO1P78417 241 aa18.25■□□□□ 0.51
CDK5RAP3-226ENST00000583182 SH3D19Q5HYK7 790 aa18.25■□□□□ 0.51
CDK5RAP3-226ENST00000583182 NECAB2Q7Z6G3 386 aa18.25■□□□□ 0.51
CDK5RAP3-226ENST00000583182 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
CDK5RAP3-226ENST00000583182 RAI14Q9P0K7 980 aa18.25■□□□□ 0.51
CDK5RAP3-226ENST00000583182 CDK5RAP2Q96SN8 1893 aa18.24■□□□□ 0.51
CDK5RAP3-226ENST00000583182 DDX60LQ5H9U9 1706 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-226ENST00000583182 GNAI3P08754 354 aa18.24■□□□□ 0.51
CDK5RAP3-226ENST00000583182 ARID4AP29374 1257 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-226ENST00000583182 MCAMP43121 646 aa18.24■□□□□ 0.51
CDK5RAP3-226ENST00000583182 MNX1P50219 401 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-226ENST00000583182 RARSP54136 660 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-226ENST00000583182 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.51
CDK5RAP3-226ENST00000583182 TEX11Q8IYF3 940 aa18.24■□□□□ 0.51
CDK5RAP3-226ENST00000583182 GORABQ5T7V8 394 aa18.23■□□□□ 0.51
CDK5RAP3-226ENST00000583182 ANKLE1Q8NAG6 615 aa18.23■□□□□ 0.51
CDK5RAP3-226ENST00000583182 SH3RF3Q8TEJ3 882 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-226ENST00000583182 GDF15Q99988 308 aa18.23■□□□□ 0.51
CDK5RAP3-226ENST00000583182 MORF4L1Q9UBU8 362 aa18.23■□□□□ 0.51
CDK5RAP3-226ENST00000583182 HERC5Q9UII4 1024 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-226ENST00000583182 RPTORQ8N122 1335 aa18.23■□□□□ 0.51
CDK5RAP3-226ENST00000583182 PEX10O60683 326 aa18.22■□□□□ 0.51
CDK5RAP3-226ENST00000583182 JAG1P78504 1218 aa18.22■□□□□ 0.51
CDK5RAP3-226ENST00000583182 C7orf61Q8IZ16 206 aa18.22■□□□□ 0.51
CDK5RAP3-226ENST00000583182 TRIB2Q92519 343 aa18.22■□□□□ 0.51
CDK5RAP3-226ENST00000583182 ARHGAP45Q92619 1136 aa18.22■□□□□ 0.51
CDK5RAP3-226ENST00000583182 AS3MTQ9HBK9 375 aa18.22■□□□□ 0.51
CDK5RAP3-226ENST00000583182 HMX1Q9NP08 348 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-226ENST00000583182 ZMYND8Q9ULU4 1186 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-226ENST00000583182 FOCADQ5VW36 1801 aa18.21■□□□□ 0.51
CDK5RAP3-226ENST00000583182 MYO5AQ9Y4I1 1855 aaKnown RBP18.21■□□□□ 0.51
CDK5RAP3-226ENST00000583182 MTMR2Q13614 643 aa18.21■□□□□ 0.51
CDK5RAP3-226ENST00000583182 WDR18Q9BV38 432 aa18.21■□□□□ 0.51
CDK5RAP3-226ENST00000583182 LRP2BPQ9P2M1 347 aa18.21■□□□□ 0.51
CDK5RAP3-226ENST00000583182 PI4KBQ9UBF8 816 aa18.21■□□□□ 0.51
CDK5RAP3-226ENST00000583182 MAST2Q6P0Q8 1798 aa18.21■□□□□ 0.51
CDK5RAP3-226ENST00000583182 PNMA6EA0A0J9YXQ4 647 aa18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 CYP2B6P20813 491 aa18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 BMP8BP34820 402 aa18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 BACE1P56817 501 aa18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 SHROOM1Q2M3G4 852 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 SLC17A8Q8NDX2 589 aa18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 P2RX7Q99572 595 aaKnown RBP18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 NBPF3Q9H094 633 aa18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 DNAJC18Q9H819 358 aa18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 TXNRD2Q9NNW7 524 aa18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 AATFQ9NY61 560 aaKnown RBP eCLIP18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
CDK5RAP3-226ENST00000583182 UQCRFS1P1P0C7P4 283 aa18.19■□□□□ 0.5
CDK5RAP3-226ENST00000583182 HOXA7P31268 230 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-226ENST00000583182 IRX3P78415 501 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-226ENST00000583182 MAP3K21Q5TCX8 1036 aa18.19■□□□□ 0.5
CDK5RAP3-226ENST00000583182 SNRKQ9NRH2 765 aa18.19■□□□□ 0.5
CDK5RAP3-226ENST00000583182 OGDHLQ9ULD0 1010 aa18.19■□□□□ 0.5
CDK5RAP3-226ENST00000583182 GNAI2P04899 355 aa18.18■□□□□ 0.5
CDK5RAP3-226ENST00000583182 ASNSP08243 561 aa18.18■□□□□ 0.5
CDK5RAP3-226ENST00000583182 SYN1P17600 705 aa18.18■□□□□ 0.5
CDK5RAP3-226ENST00000583182 HERVK_113P62684 666 aa18.18■□□□□ 0.5
CDK5RAP3-226ENST00000583182 G3BP1Q13283 466 aaKnown RBP eCLIP18.18■□□□□ 0.5
CDK5RAP3-226ENST00000583182 NAA16Q6N069 864 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-226ENST00000583182 ADGRA1Q86SQ6 560 aa18.18■□□□□ 0.5
CDK5RAP3-226ENST00000583182 MAPKAPK5Q8IW41 473 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms