RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 SIPA1L1O43166 1804 aa19.99■□□□□ 0.79
SREBF1-221ENST00000583080 COL2A1P02458 1487 aaPredicted RBP19.99■□□□□ 0.79
SREBF1-221ENST00000583080 SOX1O00570 391 aaPredicted RBP19.99■□□□□ 0.79
SREBF1-221ENST00000583080 SRGAP3O43295 1099 aa19.99■□□□□ 0.79
SREBF1-221ENST00000583080 EVI5O60447 810 aa19.99■□□□□ 0.79
SREBF1-221ENST00000583080 HMGCS2P54868 508 aa19.99■□□□□ 0.79
SREBF1-221ENST00000583080 SPP2Q13103 211 aa19.99■□□□□ 0.79
SREBF1-221ENST00000583080 PROCA1Q8NCQ7 364 aaPredicted RBP19.99■□□□□ 0.79
SREBF1-221ENST00000583080 NSUN4Q96CB9 384 aaKnown RBP19.99■□□□□ 0.79
SREBF1-221ENST00000583080 CRISPLD2Q9H0B8 497 aa19.99■□□□□ 0.79
SREBF1-221ENST00000583080 PNMA3Q9UL41 463 aa19.99■□□□□ 0.79
SREBF1-221ENST00000583080 NPM3O75607 178 aaKnown RBP19.98■□□□□ 0.79
SREBF1-221ENST00000583080 PAWRQ96IZ0 340 aaKnown RBP19.98■□□□□ 0.79
SREBF1-221ENST00000583080 NEUROD6Q96NK8 337 aa19.98■□□□□ 0.79
SREBF1-221ENST00000583080 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.98■□□□□ 0.79
SREBF1-221ENST00000583080 OSBPL5Q9H0X9 879 aaPredicted RBP19.98■□□□□ 0.79
SREBF1-221ENST00000583080 HDAC5Q9UQL6 1122 aa19.98■□□□□ 0.79
SREBF1-221ENST00000583080 AKAP2Q9Y2D5 859 aa19.98■□□□□ 0.79
SREBF1-221ENST00000583080 LAMA3Q16787 3333 aa19.97■□□□□ 0.79
SREBF1-221ENST00000583080 MTX1Q13505 466 aa19.97■□□□□ 0.79
SREBF1-221ENST00000583080 SPATA5Q8NB90 893 aa19.97■□□□□ 0.79
SREBF1-221ENST00000583080 ZNF280CQ8ND82 737 aa19.97■□□□□ 0.79
SREBF1-221ENST00000583080 PLXNB2O15031 1838 aa19.97■□□□□ 0.79
SREBF1-221ENST00000583080 MAST2Q6P0Q8 1798 aa19.96■□□□□ 0.79
SREBF1-221ENST00000583080 CT47B1P0C2W7 299 aaPredicted RBP19.96■□□□□ 0.79
SREBF1-221ENST00000583080 TRIM32Q13049 653 aa19.96■□□□□ 0.79
SREBF1-221ENST00000583080 ASCC2Q9H1I8 757 aaPredicted RBP19.96■□□□□ 0.79
SREBF1-221ENST00000583080 RAI14Q9P0K7 980 aa19.96■□□□□ 0.79
SREBF1-221ENST00000583080 STAP2Q9UGK3 403 aa19.96■□□□□ 0.79
SREBF1-221ENST00000583080 HMGCRP04035 888 aa19.95■□□□□ 0.78
SREBF1-221ENST00000583080 ARID4AP29374 1257 aaPredicted RBP19.95■□□□□ 0.78
SREBF1-221ENST00000583080 CAP2P40123 477 aa19.95■□□□□ 0.78
SREBF1-221ENST00000583080 MCAMP43121 646 aa19.95■□□□□ 0.78
SREBF1-221ENST00000583080 LRCH3Q96II8 777 aa19.95■□□□□ 0.78
SREBF1-221ENST00000583080 DDX60LQ5H9U9 1706 aaKnown RBP19.94■□□□□ 0.78
SREBF1-221ENST00000583080 A0A1W2PPC1 479 aa19.94■□□□□ 0.78
SREBF1-221ENST00000583080 PEX10O60683 326 aa19.94■□□□□ 0.78
SREBF1-221ENST00000583080 GCLCP48506 637 aaPredicted RBP19.94■□□□□ 0.78
SREBF1-221ENST00000583080 RARSP54136 660 aaKnown RBP19.94■□□□□ 0.78
SREBF1-221ENST00000583080 GSTO1P78417 241 aa19.94■□□□□ 0.78
SREBF1-221ENST00000583080 TEX11Q8IYF3 940 aa19.94■□□□□ 0.78
SREBF1-221ENST00000583080 SH3RF3Q8TEJ3 882 aaPredicted RBP19.94■□□□□ 0.78
SREBF1-221ENST00000583080 GJD2Q9UKL4 321 aa19.94■□□□□ 0.78
SREBF1-221ENST00000583080 USP17L5A8MUK1 530 aa19.93■□□□□ 0.78
SREBF1-221ENST00000583080 LDHCP07864 332 aa19.93■□□□□ 0.78
SREBF1-221ENST00000583080 GNAI3P08754 354 aa19.93■□□□□ 0.78
SREBF1-221ENST00000583080 SH3D19Q5HYK7 790 aa19.93■□□□□ 0.78
SREBF1-221ENST00000583080 GORABQ5T7V8 394 aa19.93■□□□□ 0.78
SREBF1-221ENST00000583080 NECAB2Q7Z6G3 386 aa19.93■□□□□ 0.78
SREBF1-221ENST00000583080 C7orf61Q8IZ16 206 aa19.93■□□□□ 0.78
SREBF1-221ENST00000583080 TNNQ9UQP3 1299 aa19.93■□□□□ 0.78
SREBF1-221ENST00000583080 CDK5RAP2Q96SN8 1893 aa19.92■□□□□ 0.78
SREBF1-221ENST00000583080 MAP4K4O95819 1239 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-221ENST00000583080 CAPN2P17655 700 aa19.92■□□□□ 0.78
SREBF1-221ENST00000583080 MNX1P50219 401 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-221ENST00000583080 JAG1P78504 1218 aa19.92■□□□□ 0.78
SREBF1-221ENST00000583080 PABPC4Q13310 644 aaKnown RBP eCLIP19.92■□□□□ 0.78
SREBF1-221ENST00000583080 MTMR2Q13614 643 aa19.92■□□□□ 0.78
SREBF1-221ENST00000583080 SHROOM1Q2M3G4 852 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-221ENST00000583080 TRIB2Q92519 343 aa19.92■□□□□ 0.78
SREBF1-221ENST00000583080 TBC1D2Q9BYX2 928 aa19.92■□□□□ 0.78
SREBF1-221ENST00000583080 DNAJC18Q9H819 358 aa19.92■□□□□ 0.78
SREBF1-221ENST00000583080 ZMYND8Q9ULU4 1186 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-221ENST00000583080 PNMA6EA0A0J9YXQ4 647 aa19.91■□□□□ 0.78
SREBF1-221ENST00000583080 MORF4L1Q9UBU8 362 aa19.91■□□□□ 0.78
SREBF1-221ENST00000583080 HERC5Q9UII4 1024 aaKnown RBP19.91■□□□□ 0.78
SREBF1-221ENST00000583080 ADGRA1Q86SQ6 560 aa19.9■□□□□ 0.78
SREBF1-221ENST00000583080 ANKLE1Q8NAG6 615 aa19.9■□□□□ 0.78
SREBF1-221ENST00000583080 ARHGAP45Q92619 1136 aa19.9■□□□□ 0.78
SREBF1-221ENST00000583080 AS3MTQ9HBK9 375 aa19.9■□□□□ 0.78
SREBF1-221ENST00000583080 TXNRD2Q9NNW7 524 aa19.9■□□□□ 0.78
SREBF1-221ENST00000583080 SNRKQ9NRH2 765 aa19.9■□□□□ 0.78
SREBF1-221ENST00000583080 AATFQ9NY61 560 aaKnown RBP eCLIP19.9■□□□□ 0.78
SREBF1-221ENST00000583080 LRP2BPQ9P2M1 347 aa19.9■□□□□ 0.78
SREBF1-221ENST00000583080 RPTORQ8N122 1335 aa19.9■□□□□ 0.78
SREBF1-221ENST00000583080 FOCADQ5VW36 1801 aa19.9■□□□□ 0.78
SREBF1-221ENST00000583080 CYP2B6P20813 491 aa19.89■□□□□ 0.77
SREBF1-221ENST00000583080 IRX3P78415 501 aaPredicted RBP19.89■□□□□ 0.77
SREBF1-221ENST00000583080 MAPKAPK5Q8IW41 473 aa19.89■□□□□ 0.77
SREBF1-221ENST00000583080 GDF15Q99988 308 aa19.89■□□□□ 0.77
SREBF1-221ENST00000583080 WDR18Q9BV38 432 aa19.89■□□□□ 0.77
SREBF1-221ENST00000583080 HMX1Q9NP08 348 aaPredicted RBP19.89■□□□□ 0.77
SREBF1-221ENST00000583080 FLT1P17948 1338 aa19.88■□□□□ 0.77
SREBF1-221ENST00000583080 GDF11O95390 407 aa19.88■□□□□ 0.77
SREBF1-221ENST00000583080 TRIM27P14373 513 aa19.88■□□□□ 0.77
SREBF1-221ENST00000583080 SYN1P17600 705 aa19.88■□□□□ 0.77
SREBF1-221ENST00000583080 BACE1P56817 501 aa19.88■□□□□ 0.77
SREBF1-221ENST00000583080 P2RX7Q99572 595 aaKnown RBP19.88■□□□□ 0.77
SREBF1-221ENST00000583080 PI4KBQ9UBF8 816 aa19.88■□□□□ 0.77
SREBF1-221ENST00000583080 MYO5AQ9Y4I1 1855 aaKnown RBP19.88■□□□□ 0.77
SREBF1-221ENST00000583080 GNAI2P04899 355 aa19.87■□□□□ 0.77
SREBF1-221ENST00000583080 UQCRFS1P1P0C7P4 283 aa19.87■□□□□ 0.77
SREBF1-221ENST00000583080 PRKAR2AP13861 404 aaKnown RBP19.87■□□□□ 0.77
SREBF1-221ENST00000583080 G3BP1Q13283 466 aaKnown RBP eCLIP19.87■□□□□ 0.77
SREBF1-221ENST00000583080 MAP3K21Q5TCX8 1036 aa19.87■□□□□ 0.77
SREBF1-221ENST00000583080 NAA16Q6N069 864 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-221ENST00000583080 TGFBRAP1Q8WUH2 860 aa19.87■□□□□ 0.77
SREBF1-221ENST00000583080 NOL10Q9BSC4 688 aaKnown RBP19.87■□□□□ 0.77
SREBF1-221ENST00000583080 NBPF3Q9H094 633 aa19.87■□□□□ 0.77
SREBF1-221ENST00000583080 C11orf49Q9H6J7 331 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms