RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 CNPY2Q9Y2B0 182 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 BAZ2AQ9UIF9 1905 aaKnown RBP17.13■□□□□ 0.33
MKS1-211ENST00000581761 GOLGA8AA7E2F4 631 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 SMIM22K7EJ46 135 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 ZBTB43O43298 467 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 CYP2D6P10635 497 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 PCP11498 1178 aaKnown RBP17.12■□□□□ 0.33
MKS1-211ENST00000581761 BTDP43251 543 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 WTAPQ15007 396 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 SYNE3Q6ZMZ3 975 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 FERMT3Q86UX7 667 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 SGMS1Q86VZ5 419 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 CERS3Q8IU89 383 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 ZKSCAN3Q9BRR0 538 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 COL4A5P29400 1685 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 LAMB1P07942 1786 aa17.12■□□□□ 0.33
MKS1-211ENST00000581761 KIF3CO14782 793 aa17.11■□□□□ 0.33
MKS1-211ENST00000581761 GRIPAP1Q4V328 841 aa17.11■□□□□ 0.33
MKS1-211ENST00000581761 APOA5Q6Q788 366 aa17.11■□□□□ 0.33
MKS1-211ENST00000581761 USP48Q86UV5 1035 aa17.11■□□□□ 0.33
MKS1-211ENST00000581761 TMEM87AQ8NBN3 555 aa17.11■□□□□ 0.33
MKS1-211ENST00000581761 UBAC1Q9BSL1 405 aa17.11■□□□□ 0.33
MKS1-211ENST00000581761 GDPD2Q9HCC8 539 aa17.11■□□□□ 0.33
MKS1-211ENST00000581761 NMRK2Q9NPI5 230 aa17.11■□□□□ 0.33
MKS1-211ENST00000581761 MCM9Q9NXL9 1143 aa17.11■□□□□ 0.33
MKS1-211ENST00000581761 SLC12A7Q9Y666 1083 aa17.11■□□□□ 0.33
MKS1-211ENST00000581761 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
MKS1-211ENST00000581761 GPR75-ASB3A0A0A6YYF3 556 aa17.1■□□□□ 0.33
MKS1-211ENST00000581761 RANBP6O60518 1105 aaKnown RBP17.1■□□□□ 0.33
MKS1-211ENST00000581761 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
MKS1-211ENST00000581761 MBD3O95983 291 aa17.1■□□□□ 0.33
MKS1-211ENST00000581761 FGRP09769 529 aa17.1■□□□□ 0.33
MKS1-211ENST00000581761 USP17L8P0C7I0 530 aa17.1■□□□□ 0.33
MKS1-211ENST00000581761 PLCG2P16885 1265 aa17.1■□□□□ 0.33
MKS1-211ENST00000581761 IARSP41252 1262 aaKnown RBP17.1■□□□□ 0.33
MKS1-211ENST00000581761 DNM1Q05193 864 aaKnown RBP17.1■□□□□ 0.33
MKS1-211ENST00000581761 CSPP1Q1MSJ5 1256 aa17.1■□□□□ 0.33
MKS1-211ENST00000581761 CPLX2Q6PUV4 134 aaKnown RBP17.1■□□□□ 0.33
MKS1-211ENST00000581761 MICU3Q86XE3 530 aa17.1■□□□□ 0.33
MKS1-211ENST00000581761 AMOTL1Q8IY63 956 aa17.1■□□□□ 0.33
MKS1-211ENST00000581761 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
MKS1-211ENST00000581761 SUGT1Q9Y2Z0 365 aa17.1■□□□□ 0.33
MKS1-211ENST00000581761 FIBPO43427 364 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 ORC4O43929 436 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 PRDM1O75626 825 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 CDKL5O76039 1030 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 RXRAP19793 462 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 RESTQ13127 1097 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 TEX11Q8IYF3 940 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 TMTC2Q8N394 836 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 GPT2Q8TD30 523 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 TGFBRAP1Q8WUH2 860 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 FAM163AQ96GL9 167 aaPredicted RBP17.09■□□□□ 0.33
MKS1-211ENST00000581761 ORC3Q9UBD5 711 aaPredicted RBP17.09■□□□□ 0.33
MKS1-211ENST00000581761 GAKO14976 1311 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 NAV1Q8NEY1 1877 aa17.09■□□□□ 0.33
MKS1-211ENST00000581761 TNKSO95271 1327 aa17.08■□□□□ 0.32
MKS1-211ENST00000581761 FDPSP14324 419 aaKnown RBP17.08■□□□□ 0.32
MKS1-211ENST00000581761 KRT85P78386 507 aa17.08■□□□□ 0.32
MKS1-211ENST00000581761 EVX2Q03828 476 aa17.08■□□□□ 0.32
MKS1-211ENST00000581761 PDE4BQ07343 736 aa17.08■□□□□ 0.32
MKS1-211ENST00000581761 AOC3Q16853 763 aa17.08■□□□□ 0.32
MKS1-211ENST00000581761 MAPKAPK5Q8IW41 473 aa17.08■□□□□ 0.32
MKS1-211ENST00000581761 CCDC144CPQ8IYA2 1237 aa17.08■□□□□ 0.32
MKS1-211ENST00000581761 MYL10Q9BUA6 226 aa17.08■□□□□ 0.32
MKS1-211ENST00000581761 NID2Q14112 1375 aa17.07■□□□□ 0.32
MKS1-211ENST00000581761 F8W031 263 aaPredicted RBP17.07■□□□□ 0.32
MKS1-211ENST00000581761 POLR3DP05423 398 aaPredicted RBP17.07■□□□□ 0.32
MKS1-211ENST00000581761 CDC27P30260 824 aa17.07■□□□□ 0.32
MKS1-211ENST00000581761 ADD1P35611 737 aaKnown RBP17.07■□□□□ 0.32
MKS1-211ENST00000581761 SLC4A8Q2Y0W8 1093 aa17.07■□□□□ 0.32
MKS1-211ENST00000581761 C12orf60Q5U649 245 aa17.07■□□□□ 0.32
MKS1-211ENST00000581761 ZSCAN10Q96SZ4 725 aaPredicted RBP17.07■□□□□ 0.32
MKS1-211ENST00000581761 ZSCAN16Q9H4T2 348 aaPredicted RBP17.07■□□□□ 0.32
MKS1-211ENST00000581761 DBNDD1Q9H9R9 158 aa17.07■□□□□ 0.32
MKS1-211ENST00000581761 MKRN1Q9UHC7 482 aaKnown RBP17.07■□□□□ 0.32
MKS1-211ENST00000581761 DAGLAQ9Y4D2 1042 aa17.07■□□□□ 0.32
MKS1-211ENST00000581761 ZC3H4Q9UPT8 1303 aaKnown RBP17.06■□□□□ 0.32
MKS1-211ENST00000581761 GADD45BO75293 160 aaPredicted RBP17.06■□□□□ 0.32
MKS1-211ENST00000581761 SEC23AQ15436 765 aa17.06■□□□□ 0.32
MKS1-211ENST00000581761 RTN1Q16799 776 aa17.06■□□□□ 0.32
MKS1-211ENST00000581761 CAVIN1Q6NZI2 390 aaKnown RBP17.06■□□□□ 0.32
MKS1-211ENST00000581761 PODNQ7Z5L7 613 aa17.06■□□□□ 0.32
MKS1-211ENST00000581761 IQCA1Q86XH1 822 aa17.06■□□□□ 0.32
MKS1-211ENST00000581761 ZNF654Q8IZM8 581 aa17.06■□□□□ 0.32
MKS1-211ENST00000581761 CERS5Q8N5B7 392 aa17.06■□□□□ 0.32
MKS1-211ENST00000581761 SUPT20HQ8NEM7 779 aa17.06■□□□□ 0.32
MKS1-211ENST00000581761 C8orf76Q96K31 380 aa17.06■□□□□ 0.32
MKS1-211ENST00000581761 MXD3Q9BW11 206 aa17.06■□□□□ 0.32
MKS1-211ENST00000581761 RRAGCQ9HB90 399 aa17.06■□□□□ 0.32
MKS1-211ENST00000581761 SAP30BPQ9UHR5 308 aaKnown RBP17.06■□□□□ 0.32
MKS1-211ENST00000581761 TTF2Q9UNY4 1162 aaKnown RBP17.06■□□□□ 0.32
MKS1-211ENST00000581761 ROBO3Q96MS0 1386 aa17.05■□□□□ 0.32
MKS1-211ENST00000581761 ZNF541Q9H0D2 1346 aa17.05■□□□□ 0.32
MKS1-211ENST00000581761 FZD9O00144 591 aa17.05■□□□□ 0.32
MKS1-211ENST00000581761 PPIP5K2O43314 1243 aa17.05■□□□□ 0.32
MKS1-211ENST00000581761 ECE2O60344 883 aa17.05■□□□□ 0.32
MKS1-211ENST00000581761 RCAN1P53805 252 aa17.05■□□□□ 0.32
MKS1-211ENST00000581761 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
MKS1-211ENST00000581761 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms