RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PLD6Q8N2A8 252 aaKnown RBP7.71□□□□□ -1.18
SMCHD1-205ENST00000581383 TOP6BLQ8N6T0 577 aa7.71□□□□□ -1.18
SMCHD1-205ENST00000581383 GPBAR1Q8TDU6 330 aa7.71□□□□□ -1.18
SMCHD1-205ENST00000581383 BCL7CQ8WUZ0 217 aaPredicted RBP7.71□□□□□ -1.18
SMCHD1-205ENST00000581383 C12orf49Q9H741 205 aa7.71□□□□□ -1.18
SMCHD1-205ENST00000581383 GIPC1O14908 333 aa7.7□□□□□ -1.18
SMCHD1-205ENST00000581383 FBXO24O75426 580 aa7.7□□□□□ -1.18
SMCHD1-205ENST00000581383 JUNBP17275 347 aaPredicted RBP7.7□□□□□ -1.18
SMCHD1-205ENST00000581383 LRRC14Q15048 493 aa7.7□□□□□ -1.18
SMCHD1-205ENST00000581383 LDLRAD1Q5T700 205 aa7.7□□□□□ -1.18
SMCHD1-205ENST00000581383 TMEM87AQ8NBN3 555 aa7.7□□□□□ -1.18
SMCHD1-205ENST00000581383 ELMO3Q96BJ8 720 aa7.7□□□□□ -1.18
SMCHD1-205ENST00000581383 SRCIN1Q9C0H9 1055 aa7.7□□□□□ -1.18
SMCHD1-205ENST00000581383 DCDC2CA8MYV0 355 aa7.69□□□□□ -1.18
SMCHD1-205ENST00000581383 LEFTY1O75610 366 aa7.69□□□□□ -1.18
SMCHD1-205ENST00000581383 IFI16Q16666 785 aaKnown RBP7.69□□□□□ -1.18
SMCHD1-205ENST00000581383 AOC3Q16853 763 aa7.69□□□□□ -1.18
SMCHD1-205ENST00000581383 RNF214Q8ND24 703 aa7.69□□□□□ -1.18
SMCHD1-205ENST00000581383 PI4K2BQ8TCG2 481 aa7.69□□□□□ -1.18
SMCHD1-205ENST00000581383 STK35Q8TDR2 534 aa7.69□□□□□ -1.18
SMCHD1-205ENST00000581383 ISL2Q96A47 359 aa7.69□□□□□ -1.18
SMCHD1-205ENST00000581383 HRASLS5Q96KN8 279 aa7.69□□□□□ -1.18
SMCHD1-205ENST00000581383 PCDHA4Q9UN74 947 aa7.69□□□□□ -1.18
SMCHD1-205ENST00000581383 CTSHP09668 335 aa7.68□□□□□ -1.18
SMCHD1-205ENST00000581383 TCF3P15923 654 aa7.68□□□□□ -1.18
SMCHD1-205ENST00000581383 ERVK-24P63145 666 aa7.68□□□□□ -1.18
SMCHD1-205ENST00000581383 PPM1JQ5JR12 505 aa7.68□□□□□ -1.18
SMCHD1-205ENST00000581383 LLGL2Q6P1M3 1020 aa7.68□□□□□ -1.18
SMCHD1-205ENST00000581383 PDZD3Q86UT5 571 aa7.68□□□□□ -1.18
SMCHD1-205ENST00000581383 NECAB3Q96P71 396 aaPredicted RBP7.68□□□□□ -1.18
SMCHD1-205ENST00000581383 DUSP23Q9BVJ7 150 aa7.68□□□□□ -1.18
SMCHD1-205ENST00000581383 IGSF5Q9NSI5 407 aa7.68□□□□□ -1.18
SMCHD1-205ENST00000581383 GTF2IRD1Q9UHL9 959 aa7.68□□□□□ -1.18
SMCHD1-205ENST00000581383 TMEM265A0A087WTH1 108 aa7.67□□□□□ -1.18
SMCHD1-205ENST00000581383 JAG1P78504 1218 aa7.67□□□□□ -1.18
SMCHD1-205ENST00000581383 ZNF792Q3KQV3 632 aa7.67□□□□□ -1.18
SMCHD1-205ENST00000581383 ZC3H12AQ5D1E8 599 aaKnown RBP7.67□□□□□ -1.18
SMCHD1-205ENST00000581383 C12orf40Q86WS4 652 aa7.67□□□□□ -1.18
SMCHD1-205ENST00000581383 RC3H2Q9HBD1 1191 aaKnown RBP7.67□□□□□ -1.18
SMCHD1-205ENST00000581383 FAM8A1Q9UBU6 413 aa7.67□□□□□ -1.18
SMCHD1-205ENST00000581383 VAV3Q9UKW4 847 aa7.67□□□□□ -1.18
SMCHD1-205ENST00000581383 GNAT3A8MTJ3 354 aa7.66□□□□□ -1.18
SMCHD1-205ENST00000581383 CEACAM5P06731 702 aa7.66□□□□□ -1.18
SMCHD1-205ENST00000581383 USP17L7P0C7H9 530 aa7.66□□□□□ -1.18
SMCHD1-205ENST00000581383 PRKCQQ04759 706 aa7.66□□□□□ -1.18
SMCHD1-205ENST00000581383 SPRED2Q7Z698 418 aa7.66□□□□□ -1.18
SMCHD1-205ENST00000581383 GRIN3AQ8TCU5 1115 aa7.66□□□□□ -1.18
SMCHD1-205ENST00000581383 CRELD1Q96HD1 420 aa7.66□□□□□ -1.18
SMCHD1-205ENST00000581383 KRTAP4-5Q9BYR2 181 aa7.66□□□□□ -1.18
SMCHD1-205ENST00000581383 PPM1HQ9ULR3 514 aa7.66□□□□□ -1.18
SMCHD1-205ENST00000581383 TTF2Q9UNY4 1162 aaKnown RBP7.66□□□□□ -1.18
SMCHD1-205ENST00000581383 PCDHGC5Q9Y5F6 944 aa7.66□□□□□ -1.18
SMCHD1-205ENST00000581383 PRAMEF27A3QJZ7 478 aa7.65□□□□□ -1.18
SMCHD1-205ENST00000581383 SCAMP3O14828 347 aaKnown RBP7.65□□□□□ -1.18
SMCHD1-205ENST00000581383 NEFMP07197 916 aa7.65□□□□□ -1.18
SMCHD1-205ENST00000581383 CD8BP10966 210 aa7.65□□□□□ -1.18
SMCHD1-205ENST00000581383 ANGEL2Q5VTE6 544 aaKnown RBP7.65□□□□□ -1.18
SMCHD1-205ENST00000581383 C9orf131Q5VYM1 1079 aa7.65□□□□□ -1.18
SMCHD1-205ENST00000581383 KCT2Q8NC54 265 aa7.65□□□□□ -1.18
SMCHD1-205ENST00000581383 KRTAP17-1Q9BYP8 105 aa7.65□□□□□ -1.18
SMCHD1-205ENST00000581383 TRIM37O94972 964 aa7.64□□□□□ -1.19
SMCHD1-205ENST00000581383 CD96P40200 585 aa7.64□□□□□ -1.19
SMCHD1-205ENST00000581383 MEI1Q5TIA1 1274 aa7.64□□□□□ -1.19
SMCHD1-205ENST00000581383 MPRIPQ6WCQ1 1025 aa7.64□□□□□ -1.19
SMCHD1-205ENST00000581383 CBLL1Q75N03 491 aa7.64□□□□□ -1.19
SMCHD1-205ENST00000581383 PRDM10Q9NQV6 1147 aa7.64□□□□□ -1.19
SMCHD1-205ENST00000581383 ENC1O14682 589 aa7.63□□□□□ -1.19
SMCHD1-205ENST00000581383 HDLBPQ00341 1268 aaKnown RBP7.63□□□□□ -1.19
SMCHD1-205ENST00000581383 IKZF1Q13422 519 aa7.63□□□□□ -1.19
SMCHD1-205ENST00000581383 OGFOD2Q6N063 350 aa7.63□□□□□ -1.19
SMCHD1-205ENST00000581383 NFXL1Q6ZNB6 911 aa7.63□□□□□ -1.19
SMCHD1-205ENST00000581383 MKNK2Q9HBH9 465 aa7.63□□□□□ -1.19
SMCHD1-205ENST00000581383 CYP8B1Q9UNU6 501 aa7.63□□□□□ -1.19
SMCHD1-205ENST00000581383 FANCGO15287 622 aa7.62□□□□□ -1.19
SMCHD1-205ENST00000581383 PAGE1O75459 146 aa7.62□□□□□ -1.19
SMCHD1-205ENST00000581383 FUT4P22083 530 aa7.62□□□□□ -1.19
SMCHD1-205ENST00000581383 ZNF252P-AS1Q0IIN9 211 aa7.62□□□□□ -1.19
SMCHD1-205ENST00000581383 TAF1CQ15572 869 aaPredicted RBP7.62□□□□□ -1.19
SMCHD1-205ENST00000581383 PCNX4Q63HM2 1172 aa7.62□□□□□ -1.19
SMCHD1-205ENST00000581383 C3orf58Q8NDZ4 430 aa7.62□□□□□ -1.19
SMCHD1-205ENST00000581383 ZNF507Q8TCN5 953 aa7.62□□□□□ -1.19
SMCHD1-205ENST00000581383 ASB11Q8WXH4 323 aa7.62□□□□□ -1.19
SMCHD1-205ENST00000581383 TPX2Q9ULW0 747 aaKnown RBP7.62□□□□□ -1.19
SMCHD1-205ENST00000581383 USP31Q70CQ4 1352 aa7.61□□□□□ -1.19
SMCHD1-205ENST00000581383 FAM155AB1AL88 458 aaPredicted RBP7.61□□□□□ -1.19
SMCHD1-205ENST00000581383 BMP6P22004 513 aa7.61□□□□□ -1.19
SMCHD1-205ENST00000581383 ZNF76P36508 570 aa7.61□□□□□ -1.19
SMCHD1-205ENST00000581383 OXCT1P55809 520 aa7.61□□□□□ -1.19
SMCHD1-205ENST00000581383 ETF1P62495 437 aaKnown RBP7.61□□□□□ -1.19
SMCHD1-205ENST00000581383 FANCCQ00597 558 aa7.61□□□□□ -1.19
SMCHD1-205ENST00000581383 DIEXFQ68CQ4 756 aaKnown RBP7.61□□□□□ -1.19
SMCHD1-205ENST00000581383 HDXQ7Z353 690 aa7.61□□□□□ -1.19
SMCHD1-205ENST00000581383 RNF34Q969K3 372 aa7.61□□□□□ -1.19
SMCHD1-205ENST00000581383 PRDM5Q9NQX1 630 aaPredicted RBP7.61□□□□□ -1.19
SMCHD1-205ENST00000581383 CELA3AP09093 270 aa7.6□□□□□ -1.19
SMCHD1-205ENST00000581383 ITGB5P18084 799 aa7.6□□□□□ -1.19
SMCHD1-205ENST00000581383 PKN1Q16512 942 aa7.6□□□□□ -1.19
SMCHD1-205ENST00000581383 FAM168AQ92567 244 aa7.6□□□□□ -1.19
SMCHD1-205ENST00000581383 SNX11Q9Y5W9 270 aa7.6□□□□□ -1.19
SMCHD1-205ENST00000581383 RNASE1P07998 156 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms