RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 MAP3K12Q12852 859 aa15.3■□□□□ 0.04
CBX1-206ENST00000581003 TAF1CQ15572 869 aaPredicted RBP15.3■□□□□ 0.04
CBX1-206ENST00000581003 SLC9C2Q5TAH2 1124 aa15.3■□□□□ 0.04
CBX1-206ENST00000581003 CTU1Q7Z7A3 348 aaKnown RBP15.3■□□□□ 0.04
CBX1-206ENST00000581003 CD99L2Q8TCZ2 262 aa15.3■□□□□ 0.04
CBX1-206ENST00000581003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.3■□□□□ 0.04
CBX1-206ENST00000581003 PHIPQ8WWQ0 1821 aa15.3■□□□□ 0.04
CBX1-206ENST00000581003 ZNF532Q9HCE3 1301 aa15.3■□□□□ 0.04
CBX1-206ENST00000581003 PAG1Q9NWQ8 432 aa15.3■□□□□ 0.04
CBX1-206ENST00000581003 KCNH4Q9UQ05 1017 aa15.3■□□□□ 0.04
CBX1-206ENST00000581003 ZHX2Q9Y6X8 837 aa15.3■□□□□ 0.04
CBX1-206ENST00000581003 HTTP42858 3142 aa15.29■□□□□ 0.04
CBX1-206ENST00000581003 CETPP11597 493 aa15.29■□□□□ 0.04
CBX1-206ENST00000581003 LCORLQ8N3X6 602 aa15.29■□□□□ 0.04
CBX1-206ENST00000581003 HAUS7Q99871 368 aa15.29■□□□□ 0.04
CBX1-206ENST00000581003 TRIM75PA6NK02 468 aa15.28■□□□□ 0.04
CBX1-206ENST00000581003 SMIM22K7EJ46 135 aa15.28■□□□□ 0.04
CBX1-206ENST00000581003 MAP4K4O95819 1239 aaPredicted RBP15.28■□□□□ 0.04
CBX1-206ENST00000581003 GPAT2Q6NUI2 795 aa15.28■□□□□ 0.04
CBX1-206ENST00000581003 ARMT1Q9H993 441 aa15.28■□□□□ 0.04
CBX1-206ENST00000581003 PICK1Q9NRD5 415 aa15.28■□□□□ 0.04
CBX1-206ENST00000581003 AFG3L2Q9Y4W6 797 aa15.28■□□□□ 0.04
CBX1-206ENST00000581003 ATAD5Q96QE3 1844 aa15.28■□□□□ 0.04
CBX1-206ENST00000581003 MAGEB6P1A0A0J9YX57 407 aa15.27■□□□□ 0.04
CBX1-206ENST00000581003 PRKAB2O43741 272 aa15.27■□□□□ 0.04
CBX1-206ENST00000581003 TBC1D12O60347 775 aa15.27■□□□□ 0.04
CBX1-206ENST00000581003 CTNND1O60716 968 aaKnown RBP15.27■□□□□ 0.04
CBX1-206ENST00000581003 GDF11O95390 407 aa15.27■□□□□ 0.04
CBX1-206ENST00000581003 PLCG2P16885 1265 aa15.27■□□□□ 0.04
CBX1-206ENST00000581003 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.04
CBX1-206ENST00000581003 SDR42E1Q8WUS8 393 aa15.27■□□□□ 0.04
CBX1-206ENST00000581003 ARHGAP39Q9C0H5 1083 aa15.27■□□□□ 0.04
CBX1-206ENST00000581003 ECHDC1Q9NTX5 307 aa15.27■□□□□ 0.04
CBX1-206ENST00000581003 NAV1Q8NEY1 1877 aa15.27■□□□□ 0.03
CBX1-206ENST00000581003 ADGRA2Q96PE1 1338 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 A0A0G2JLL6 359 aaPredicted RBP15.26■□□□□ 0.03
CBX1-206ENST00000581003 PDHXO00330 501 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 CYP2C8P10632 490 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 CYP2D6P10635 497 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 ADD2P35612 726 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 USP5P45974 858 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 TTF1Q15361 905 aaPredicted RBP15.26■□□□□ 0.03
CBX1-206ENST00000581003 OTUD7BQ6GQQ9 843 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 OTOP1Q7RTM1 612 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 PRRT2Q7Z6L0 340 aaPredicted RBP15.26■□□□□ 0.03
CBX1-206ENST00000581003 EXOC6Q8TAG9 804 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 PI4KBQ9UBF8 816 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 CPA4Q9UI42 421 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 HPS5Q9UPZ3 1129 aa15.26■□□□□ 0.03
CBX1-206ENST00000581003 MBD4O95243 580 aa15.25■□□□□ 0.03
CBX1-206ENST00000581003 CTGFP29279 349 aa15.25■□□□□ 0.03
CBX1-206ENST00000581003 CAP2P40123 477 aa15.25■□□□□ 0.03
CBX1-206ENST00000581003 PLCD1P51178 756 aa15.25■□□□□ 0.03
CBX1-206ENST00000581003 TREML2Q5T2D2 321 aa15.25■□□□□ 0.03
CBX1-206ENST00000581003 GADL1Q6ZQY3 521 aa15.25■□□□□ 0.03
CBX1-206ENST00000581003 ANKRD23Q86SG2 305 aa15.25■□□□□ 0.03
CBX1-206ENST00000581003 TRIM17Q9Y577 477 aa15.25■□□□□ 0.03
CBX1-206ENST00000581003 PTPRFP10586 1907 aa15.25■□□□□ 0.03
CBX1-206ENST00000581003 MYH1P12882 1939 aa15.24■□□□□ 0.03
CBX1-206ENST00000581003 CXCL11O14625 94 aa15.24■□□□□ 0.03
CBX1-206ENST00000581003 SOX10P56693 466 aa15.24■□□□□ 0.03
CBX1-206ENST00000581003 IRX6P78412 446 aaPredicted RBP15.24■□□□□ 0.03
CBX1-206ENST00000581003 SP3Q02447 781 aa15.24■□□□□ 0.03
CBX1-206ENST00000581003 METTL16Q86W50 562 aaKnown RBP15.24■□□□□ 0.03
CBX1-206ENST00000581003 CRACR2BQ8N4Y2 399 aaPredicted RBP15.24■□□□□ 0.03
CBX1-206ENST00000581003 DHX36Q9H2U1 1008 aaKnown RBP15.24■□□□□ 0.03
CBX1-206ENST00000581003 ZFYVE28Q9HCC9 887 aa15.24■□□□□ 0.03
CBX1-206ENST00000581003 HERC5Q9UII4 1024 aaKnown RBP15.24■□□□□ 0.03
CBX1-206ENST00000581003 CYP2D7A0A087X1C5 515 aa15.23■□□□□ 0.03
CBX1-206ENST00000581003 TLR2O60603 784 aa15.23■□□□□ 0.03
CBX1-206ENST00000581003 SPP2Q13103 211 aa15.23■□□□□ 0.03
CBX1-206ENST00000581003 SLC44A5Q8NCS7 719 aa15.23■□□□□ 0.03
CBX1-206ENST00000581003 PI4K2BQ8TCG2 481 aa15.23■□□□□ 0.03
CBX1-206ENST00000581003 PUS7LQ9H0K6 701 aaKnown RBP15.23■□□□□ 0.03
CBX1-206ENST00000581003 SUPT16HQ9Y5B9 1047 aaKnown RBP15.23■□□□□ 0.03
CBX1-206ENST00000581003 LOC285556D6RIA3 1793 aa15.23■□□□□ 0.03
CBX1-206ENST00000581003 SALL3Q9BXA9 1300 aa15.22■□□□□ 0.03
CBX1-206ENST00000581003 IGSF3O75054 1194 aa15.22■□□□□ 0.03
CBX1-206ENST00000581003 HLA-DOAP06340 250 aa15.22■□□□□ 0.03
CBX1-206ENST00000581003 HMGCS2P54868 508 aa15.22■□□□□ 0.03
CBX1-206ENST00000581003 C17orf99Q6UX52 265 aa15.22■□□□□ 0.03
CBX1-206ENST00000581003 DCP1AQ9NPI6 582 aaPredicted RBP15.22■□□□□ 0.03
CBX1-206ENST00000581003 ZBTB21Q9ULJ3 1066 aa15.22■□□□□ 0.03
CBX1-206ENST00000581003 GH2P01242 217 aa15.21■□□□□ 0.03
CBX1-206ENST00000581003 IGHDP01880 384 aa15.21■□□□□ 0.03
CBX1-206ENST00000581003 SHMT1P34896 483 aa15.21■□□□□ 0.03
CBX1-206ENST00000581003 MTMR2Q13614 643 aa15.21■□□□□ 0.03
CBX1-206ENST00000581003 ZNF280CQ8ND82 737 aa15.21■□□□□ 0.03
CBX1-206ENST00000581003 DYNLL2Q96FJ2 89 aa15.21■□□□□ 0.03
CBX1-206ENST00000581003 ERO1AQ96HE7 468 aa15.21■□□□□ 0.03
CBX1-206ENST00000581003 TRIM34Q9BYJ4 488 aa15.21■□□□□ 0.03
CBX1-206ENST00000581003 CRNKL1Q9BZJ0 848 aaKnown RBP15.21■□□□□ 0.03
CBX1-206ENST00000581003 MCM9Q9NXL9 1143 aa15.21■□□□□ 0.03
CBX1-206ENST00000581003 MYH7P12883 1935 aa15.21■□□□□ 0.02
CBX1-206ENST00000581003 USP17L5A8MUK1 530 aa15.2■□□□□ 0.02
CBX1-206ENST00000581003 PEX10O60683 326 aa15.2■□□□□ 0.02
CBX1-206ENST00000581003 HDAC1Q13547 482 aaPredicted RBP15.2■□□□□ 0.02
CBX1-206ENST00000581003 ANKRD45Q5TZF3 282 aa15.2■□□□□ 0.02
CBX1-206ENST00000581003 FBXO46Q6PJ61 603 aaPredicted RBP15.2■□□□□ 0.02
CBX1-206ENST00000581003 FOXP4Q8IVH2 680 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms