RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 NDUFB9Q9Y6M9 179 aa11.95□□□□□ -0.5
GGA3-209ENST00000580646 MYH1P12882 1939 aa11.95□□□□□ -0.5
GGA3-209ENST00000580646 NAV1Q8NEY1 1877 aa11.94□□□□□ -0.5
GGA3-209ENST00000580646 CCL15-CCL14A0A0B4J2E2 113 aa11.94□□□□□ -0.5
GGA3-209ENST00000580646 BAG3O95817 575 aa11.94□□□□□ -0.5
GGA3-209ENST00000580646 PLCG2P16885 1265 aa11.94□□□□□ -0.5
GGA3-209ENST00000580646 PPIL2Q13356 520 aa11.94□□□□□ -0.5
GGA3-209ENST00000580646 PICALMQ13492 652 aa11.94□□□□□ -0.5
GGA3-209ENST00000580646 CCL15Q16663 113 aa11.94□□□□□ -0.5
GGA3-209ENST00000580646 SH3BP5LQ7L8J4 393 aa11.94□□□□□ -0.5
GGA3-209ENST00000580646 ZSCAN29Q8IWY8 852 aaPredicted RBP11.94□□□□□ -0.5
GGA3-209ENST00000580646 MAGEB6Q8N7X4 407 aa11.94□□□□□ -0.5
GGA3-209ENST00000580646 DDX4Q9NQI0 724 aaKnown RBP11.94□□□□□ -0.5
GGA3-209ENST00000580646 DDX60LQ5H9U9 1706 aaKnown RBP11.94□□□□□ -0.5
GGA3-209ENST00000580646 TCRBV5S4A2TA0A5A2 114 aa11.93□□□□□ -0.5
GGA3-209ENST00000580646 DDTLA6NHG4 134 aaPredicted RBP11.93□□□□□ -0.5
GGA3-209ENST00000580646 IRF6O14896 467 aa11.93□□□□□ -0.5
GGA3-209ENST00000580646 PDE6AP16499 860 aa11.93□□□□□ -0.5
GGA3-209ENST00000580646 ADD2P35612 726 aa11.93□□□□□ -0.5
GGA3-209ENST00000580646 PPATQ06203 517 aa11.93□□□□□ -0.5
GGA3-209ENST00000580646 CRHR2Q13324 411 aa11.93□□□□□ -0.5
GGA3-209ENST00000580646 PKN2Q16513 984 aaKnown RBP11.93□□□□□ -0.5
GGA3-209ENST00000580646 SLC9C2Q5TAH2 1124 aa11.93□□□□□ -0.5
GGA3-209ENST00000580646 EDC3Q96F86 508 aaKnown RBP11.93□□□□□ -0.5
GGA3-209ENST00000580646 NOL10Q9BSC4 688 aaKnown RBP11.93□□□□□ -0.5
GGA3-209ENST00000580646 COL2A1P02458 1487 aaPredicted RBP11.93□□□□□ -0.5
GGA3-209ENST00000580646 ATRNL1Q5VV63 1379 aa11.92□□□□□ -0.5
GGA3-209ENST00000580646 CETPP11597 493 aa11.92□□□□□ -0.5
GGA3-209ENST00000580646 CYP7A1P22680 504 aa11.92□□□□□ -0.5
GGA3-209ENST00000580646 MAP3K10Q02779 954 aa11.92□□□□□ -0.5
GGA3-209ENST00000580646 SNAPC2Q13487 334 aa11.92□□□□□ -0.5
GGA3-209ENST00000580646 NOL9Q5SY16 702 aaKnown RBP11.92□□□□□ -0.5
GGA3-209ENST00000580646 TTC22Q5TAA0 569 aa11.92□□□□□ -0.5
GGA3-209ENST00000580646 ADGRA1Q86SQ6 560 aa11.92□□□□□ -0.5
GGA3-209ENST00000580646 FAM43AQ8N2R8 423 aa11.92□□□□□ -0.5
GGA3-209ENST00000580646 ZNF532Q9HCE3 1301 aa11.91□□□□□ -0.5
GGA3-209ENST00000580646 PHF20L1A8MW92 1017 aa11.91□□□□□ -0.5
GGA3-209ENST00000580646 TAF1CQ15572 869 aaPredicted RBP11.91□□□□□ -0.5
GGA3-209ENST00000580646 TEX11Q8IYF3 940 aa11.91□□□□□ -0.5
GGA3-209ENST00000580646 RIOK1Q9BRS2 568 aaKnown RBP11.91□□□□□ -0.5
GGA3-209ENST00000580646 FSD1Q9BTV5 496 aa11.91□□□□□ -0.5
GGA3-209ENST00000580646 ZFYVE28Q9HCC9 887 aa11.91□□□□□ -0.5
GGA3-209ENST00000580646 OTOFQ9HC10 1997 aa11.9□□□□□ -0.5
GGA3-209ENST00000580646 LAMB1P07942 1786 aa11.9□□□□□ -0.5
GGA3-209ENST00000580646 BAZ2AQ9UIF9 1905 aaKnown RBP11.9□□□□□ -0.5
GGA3-209ENST00000580646 BTBD19C9JJ37 291 aa11.9□□□□□ -0.5
GGA3-209ENST00000580646 RNF113AO15541 343 aaKnown RBP11.9□□□□□ -0.5
GGA3-209ENST00000580646 TBC1D12O60347 775 aa11.9□□□□□ -0.5
GGA3-209ENST00000580646 SLURP2P0DP57 97 aa11.9□□□□□ -0.5
GGA3-209ENST00000580646 SP3Q02447 781 aa11.9□□□□□ -0.5
GGA3-209ENST00000580646 SH3RF3Q8TEJ3 882 aaPredicted RBP11.9□□□□□ -0.5
GGA3-209ENST00000580646 APPBP2Q92624 585 aa11.9□□□□□ -0.5
GGA3-209ENST00000580646 ERO1AQ96HE7 468 aa11.9□□□□□ -0.5
GGA3-209ENST00000580646 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.5
GGA3-209ENST00000580646 ZCCHC17Q9NP64 241 aaKnown RBP11.9□□□□□ -0.5
GGA3-209ENST00000580646 AATFQ9NY61 560 aaKnown RBP eCLIP11.9□□□□□ -0.5
GGA3-209ENST00000580646 HPS5Q9UPZ3 1129 aa11.9□□□□□ -0.5
GGA3-209ENST00000580646 KCNH4Q9UQ05 1017 aa11.9□□□□□ -0.5
GGA3-209ENST00000580646 SIPA1L1O43166 1804 aa11.9□□□□□ -0.5
GGA3-209ENST00000580646 MYH8P13535 1937 aa11.9□□□□□ -0.51
GGA3-209ENST00000580646 MAGEB6P1A0A0J9YX57 407 aa11.89□□□□□ -0.51
GGA3-209ENST00000580646 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
GGA3-209ENST00000580646 HIP1O00291 1037 aa11.89□□□□□ -0.51
GGA3-209ENST00000580646 CXCL11O14625 94 aa11.89□□□□□ -0.51
GGA3-209ENST00000580646 CTNND1O60716 968 aaKnown RBP11.89□□□□□ -0.51
GGA3-209ENST00000580646 GSPT1P15170 499 aaKnown RBP11.89□□□□□ -0.51
GGA3-209ENST00000580646 FBXO46Q6PJ61 603 aaPredicted RBP11.89□□□□□ -0.51
GGA3-209ENST00000580646 SCYL3Q8IZE3 742 aa11.89□□□□□ -0.51
GGA3-209ENST00000580646 PICK1Q9NRD5 415 aa11.89□□□□□ -0.51
GGA3-209ENST00000580646 TRIM17Q9Y577 477 aa11.89□□□□□ -0.51
GGA3-209ENST00000580646 ZHX2Q9Y6X8 837 aa11.89□□□□□ -0.51
GGA3-209ENST00000580646 SOX10P56693 466 aa11.88□□□□□ -0.51
GGA3-209ENST00000580646 ZMYM1Q5SVZ6 1142 aa11.88□□□□□ -0.51
GGA3-209ENST00000580646 OTOP1Q7RTM1 612 aa11.88□□□□□ -0.51
GGA3-209ENST00000580646 ANKRD23Q86SG2 305 aa11.88□□□□□ -0.51
GGA3-209ENST00000580646 CD99L2Q8TCZ2 262 aa11.88□□□□□ -0.51
GGA3-209ENST00000580646 TGFBRAP1Q8WUH2 860 aa11.88□□□□□ -0.51
GGA3-209ENST00000580646 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.88□□□□□ -0.51
GGA3-209ENST00000580646 FAM196BA6NMK8 535 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 TLR2O60603 784 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 PTPRAP18433 802 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 DYNLL1P63167 89 aaKnown RBP11.87□□□□□ -0.51
GGA3-209ENST00000580646 MOGSQ13724 837 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 BMP2KLQ5H9B9 411 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 MAPKAPK5Q8IW41 473 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 MIGA1Q8NAN2 632 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 RILPL2Q969X0 211 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 CRNKL1Q9BZJ0 848 aaKnown RBP11.87□□□□□ -0.51
GGA3-209ENST00000580646 PUS7LQ9H0K6 701 aaKnown RBP11.87□□□□□ -0.51
GGA3-209ENST00000580646 DHX36Q9H2U1 1008 aaKnown RBP11.87□□□□□ -0.51
GGA3-209ENST00000580646 EFCC1Q9HA90 598 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 HELLSQ9NRZ9 838 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 ATP8A2Q9NTI2 1148 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 PI4KBQ9UBF8 816 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 TAOK2Q9UL54 1235 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 AFG3L2Q9Y4W6 797 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 ATAD5Q96QE3 1844 aa11.87□□□□□ -0.51
GGA3-209ENST00000580646 FLT1P17948 1338 aa11.86□□□□□ -0.51
GGA3-209ENST00000580646 PDHXO00330 501 aa11.86□□□□□ -0.51
GGA3-209ENST00000580646 MBD4O95243 580 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms