RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 PPARAQ07869 468 aa11.16□□□□□ -0.62
BPTF-211ENST00000578307 GNL2Q13823 731 aaKnown RBP11.16□□□□□ -0.62
BPTF-211ENST00000578307 WTAPQ15007 396 aa11.16□□□□□ -0.62
BPTF-211ENST00000578307 TMTC2Q8N394 836 aa11.16□□□□□ -0.62
BPTF-211ENST00000578307 PHKBQ93100 1093 aa11.16□□□□□ -0.62
BPTF-211ENST00000578307 GOLPH3LQ9H4A5 285 aa11.16□□□□□ -0.62
BPTF-211ENST00000578307 NID2Q14112 1375 aa11.16□□□□□ -0.62
BPTF-211ENST00000578307 CCDC88AQ3V6T2 1871 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 SBF2Q86WG5 1849 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 SSRP1Q08945 709 aaKnown RBP11.15□□□□□ -0.62
BPTF-211ENST00000578307 SNW1Q13573 536 aaKnown RBP11.15□□□□□ -0.62
BPTF-211ENST00000578307 NTRK3Q16288 839 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 KRT40Q6A162 431 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 ADGRA1Q86SQ6 560 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 ENGASEQ8NFI3 743 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 SDR42E1Q8WUS8 393 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 WASF1Q92558 559 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 MYL10Q9BUA6 226 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 CBX8Q9HC52 389 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 GJB4Q9NTQ9 266 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 CLIC4Q9Y696 253 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 TACC3Q9Y6A5 838 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.15□□□□□ -0.62
BPTF-211ENST00000578307 MINDY4BA8MYZ0 360 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 KIF28PB7ZC32 967 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 NPHP1O15259 732 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 SPTLC2O15270 562 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 ZNF165P49910 485 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 KIAA2012Q0VF49 1180 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 ANO1Q5XXA6 986 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 FBXO33Q7Z6M2 555 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 LUZP1Q86V48 1076 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 PROM2Q8N271 834 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
BPTF-211ENST00000578307 ANAPC4Q9UJX5 808 aa11.15□□□□□ -0.62
BPTF-211ENST00000578307 BAZ2AQ9UIF9 1905 aaKnown RBP11.15□□□□□ -0.62
BPTF-211ENST00000578307 PDS5AQ29RF7 1337 aaKnown RBP11.14□□□□□ -0.63
BPTF-211ENST00000578307 WTIPA6NIX2 430 aaPredicted RBP11.14□□□□□ -0.63
BPTF-211ENST00000578307 GOLGA6L6A8MZA4 724 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 TPM3P06753 285 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 STX1AQ16623 288 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 ESR2Q92731 530 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 AIFM3Q96NN9 605 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 ZKSCAN3Q9BRR0 538 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 RIOK1Q9BRS2 568 aaKnown RBP11.14□□□□□ -0.63
BPTF-211ENST00000578307 UBAC1Q9BSL1 405 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 SLC26A6Q9BXS9 759 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 DNAJC25Q9H1X3 360 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 FAM217BQ9NTX9 383 aaPredicted RBP11.14□□□□□ -0.63
BPTF-211ENST00000578307 MAST2Q6P0Q8 1798 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
BPTF-211ENST00000578307 AP5Z1O43299 807 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 RANBP6O60518 1105 aaKnown RBP11.14□□□□□ -0.63
BPTF-211ENST00000578307 FMNL1O95466 1100 aaPredicted RBP11.14□□□□□ -0.63
BPTF-211ENST00000578307 IFNAR1P17181 557 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 HIBADHP31937 336 aaKnown RBP11.14□□□□□ -0.63
BPTF-211ENST00000578307 RFC4P35249 363 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 RCAN1P53805 252 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 RTN1Q16799 776 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 FAM182BQ5T319 152 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 TRIM22Q8IYM9 498 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 TDRD7Q8NHU6 1098 aaKnown RBP11.14□□□□□ -0.63
BPTF-211ENST00000578307 BRIP1Q9BX63 1249 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 MYH6P13533 1939 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 MYH2Q9UKX2 1941 aa11.14□□□□□ -0.63
BPTF-211ENST00000578307 SYCP1Q15431 976 aa11.13□□□□□ -0.63
BPTF-211ENST00000578307 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
BPTF-211ENST00000578307 MEX3CQ5U5Q3 659 aaKnown RBP11.13□□□□□ -0.63
BPTF-211ENST00000578307 FMR1NBQ8N0W7 255 aaPredicted RBP11.13□□□□□ -0.63
BPTF-211ENST00000578307 DUOX1Q9NRD9 1551 aa11.13□□□□□ -0.63
BPTF-211ENST00000578307 A0A1B0GVL5 298 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 GOLGA6L19H0YKK7 550 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 DYNLL1P63167 89 aaKnown RBP11.12□□□□□ -0.63
BPTF-211ENST00000578307 CCDC24Q8N4L8 307 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 JMYQ8N9B5 988 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 ANKRD7Q92527 254 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 GJD4Q96KN9 370 aaPredicted RBP11.12□□□□□ -0.63
BPTF-211ENST00000578307 SDF4Q9BRK5 362 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 ANO10Q9NW15 660 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 TNRC6CQ9HCJ0 1690 aaKnown RBP11.12□□□□□ -0.63
BPTF-211ENST00000578307 LAMB1P07942 1786 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 PCP11498 1178 aaKnown RBP11.12□□□□□ -0.63
BPTF-211ENST00000578307 U2AF2P26368 475 aaKnown RBP eCLIP11.12□□□□□ -0.63
BPTF-211ENST00000578307 KLRK1P26718 216 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 NDUFA8P51970 172 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 SLC39A14Q15043 492 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 PPP2R5BQ15173 497 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 SAFBQ15424 915 aaKnown RBP eCLIP11.12□□□□□ -0.63
BPTF-211ENST00000578307 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
BPTF-211ENST00000578307 ZNF654Q8IZM8 581 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 MPNDQ8N594 471 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 NSUN4Q96CB9 384 aaKnown RBP11.12□□□□□ -0.63
BPTF-211ENST00000578307 TFCP2L1Q9NZI6 479 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 KCNG1Q9UIX4 513 aa11.12□□□□□ -0.63
BPTF-211ENST00000578307 TNKSO95271 1327 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 PPP6R2O75170 966 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 DEXIO95424 95 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 MECOMQ03112 1051 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms