RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SEPT6Q14141 434 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 NAALADL2Q58DX5 795 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 WIPI1Q5MNZ9 446 aaPredicted RBP3.97□□□□□ -1.77
COPS3-213ENST00000577210 C9orf131Q5VYM1 1079 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 HGSNATQ68CP4 663 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 ZNF746Q6NUN9 644 aaPredicted RBP3.97□□□□□ -1.77
COPS3-213ENST00000577210 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.97□□□□□ -1.77
COPS3-213ENST00000577210 CYFIP1Q7L576 1253 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 DYMQ7RTS9 669 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 HID1Q8IV36 788 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 DZIP1LQ8IYY4 767 aaKnown RBP3.97□□□□□ -1.77
COPS3-213ENST00000577210 RNF214Q8ND24 703 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 STK35Q8TDR2 534 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 CPLX3Q8WVH0 158 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 FERD3LQ96RJ6 166 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 GMLQ99445 158 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 WNT10AQ9GZT5 417 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 GSX1Q9H4S2 264 aaPredicted RBP3.97□□□□□ -1.77
COPS3-213ENST00000577210 SSU72Q9NP77 194 aaKnown RBP3.97□□□□□ -1.77
COPS3-213ENST00000577210 ADAMTS1Q9UHI8 967 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 PCOLCE2Q9UKZ9 415 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 PCDHB5Q9Y5E4 795 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 PCDHGB7Q9Y5F8 929 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 SLC12A7Q9Y666 1083 aa3.97□□□□□ -1.77
COPS3-213ENST00000577210 TMPRSS2O15393 492 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 WISP1O95388 367 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 SSBP05455 408 aaKnown RBP eCLIP3.96□□□□□ -1.78
COPS3-213ENST00000577210 ATP2B1P20020 1258 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 GARTP22102 1010 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 CAP2P40123 477 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 SOX9P48436 509 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 CHMP4BP1P59074 171 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 ETF1P62495 437 aaKnown RBP3.96□□□□□ -1.78
COPS3-213ENST00000577210 TMEM201Q5SNT2 666 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 SLC6A19Q695T7 634 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 PAOXQ6QHF9 649 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 BNC2Q6ZN30 1099 aaPredicted RBP3.96□□□□□ -1.78
COPS3-213ENST00000577210 SMYD4Q8IYR2 804 aaPredicted RBP3.96□□□□□ -1.78
COPS3-213ENST00000577210 AGGF1Q8N302 714 aaeCLIP3.96□□□□□ -1.78
COPS3-213ENST00000577210 SREK1Q8WXA9 508 aaKnown RBP3.96□□□□□ -1.78
COPS3-213ENST00000577210 PLPPR2Q96GM1 343 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 FAM46AQ96IP4 442 aaKnown RBP3.96□□□□□ -1.78
COPS3-213ENST00000577210 EAF1Q96JC9 268 aaPredicted RBP3.96□□□□□ -1.78
COPS3-213ENST00000577210 COX4I2Q96KJ9 171 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 MYRFLQ96LU7 910 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 FANCD2OSQ96PS1 177 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.96□□□□□ -1.784e-6■□□□□ 10.2
COPS3-213ENST00000577210 ACBD3Q9H3P7 528 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 EHMT1Q9H9B1 1298 aa3.96□□□□□ -1.78
COPS3-213ENST00000577210 PRAMEF27A3QJZ7 478 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 GFRA2O00451 464 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 HYAL3O43820 417 aaPredicted RBP3.95□□□□□ -1.78
COPS3-213ENST00000577210 RNGTTO60942 597 aaKnown RBP3.95□□□□□ -1.78
COPS3-213ENST00000577210 PGRP06401 933 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 ATF4P18848 351 aaPredicted RBP3.95□□□□□ -1.78
COPS3-213ENST00000577210 CCNFP41002 786 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 CYP27A1Q02318 531 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 RING1Q06587 406 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 CPSF6Q16630 551 aaKnown RBP eCLIP3.95□□□□□ -1.78
COPS3-213ENST00000577210 SEZ6Q53EL9 994 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 TNNI3KQ59H18 835 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 ZBTB37Q5TC79 503 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 LRFN4Q6PJG9 635 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 PRR23CQ6ZRP0 262 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 CLEC10AQ8IUN9 316 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 MFSD2AQ8NA29 543 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 RBBP8NLQ8NC74 664 aaPredicted RBP3.95□□□□□ -1.78
COPS3-213ENST00000577210 C2CD4AQ8NCU7 369 aaPredicted RBP3.95□□□□□ -1.78
COPS3-213ENST00000577210 EZH1Q92800 747 aaPredicted RBP3.95□□□□□ -1.78
COPS3-213ENST00000577210 DRC1Q96MC2 740 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 FAM83CQ9BQN1 747 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 TINF2Q9BSI4 451 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 HIRIP3Q9BW71 556 aaPredicted RBP3.95□□□□□ -1.78
COPS3-213ENST00000577210 UBP1Q9NZI7 540 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 GMIPQ9P107 970 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 PPP1R9AQ9ULJ8 1098 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 PCDHGC5Q9Y5F6 944 aa3.95□□□□□ -1.78
COPS3-213ENST00000577210 FAM95CA0A1B0GW59 222 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 DCDC2CA8MYV0 355 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 LRIG2O94898 1065 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 ECEL1O95672 775 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 DLGAP3O95886 979 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 BMP3P12645 472 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 PLCG1P19174 1290 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 RXRBP28702 533 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 PREPP48147 710 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 EIF6P56537 245 aaKnown RBP3.94□□□□□ -1.78
COPS3-213ENST00000577210 RASIP1Q5U651 963 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 NBPF6Q5VWK0 638 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 NBPF11Q86T75 865 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.94□□□□□ -1.78
COPS3-213ENST00000577210 FAM20CQ8IXL6 584 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 MRPL41Q8IXM3 137 aaKnown RBP3.94□□□□□ -1.78
COPS3-213ENST00000577210 UBXN4Q92575 508 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 WDR89Q96FK6 387 aaPredicted RBP3.94□□□□□ -1.78
COPS3-213ENST00000577210 NBPF4Q96M43 638 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 SRRTQ9BXP5 876 aaKnown RBP3.94□□□□□ -1.78
COPS3-213ENST00000577210 TANGO6Q9C0B7 1094 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 ACSS3Q9H6R3 686 aa3.94□□□□□ -1.78
COPS3-213ENST00000577210 BRMS1Q9HCU9 246 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms